Protein–RNA interactions for Protein: P0CX28

RPL42B, 60S ribosomal protein L42-B, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42BP0CX28 tF(GAA)DtF(GAA)D 73 nt1.98□□□□□ -2.09
RPL42BP0CX28 tF(GAA)NtF(GAA)N 73 nt1.98□□□□□ -2.09
RPL42BP0CX28 YLR255CYLR255C 354 nt1.98□□□□□ -2.09
RPL42BP0CX28 YNL114CYNL114C 372 nt1.98□□□□□ -2.09
RPL42BP0CX28 YPR002C-AYPR002C-A 198 nt1.98□□□□□ -2.09
RPL42BP0CX28 SCW11YGL028C 1629 nt1.98□□□□□ -2.09
RPL42BP0CX28 SWI6YLR182W 2412 nt1.98□□□□□ -2.09
RPL42BP0CX28 ZRG8YER033C 3231 nt1.98□□□□□ -2.09
RPL42BP0CX28 CFT2YLR115W 2580 nt1.98□□□□□ -2.09
RPL42BP0CX28 YDR239CYDR239C 2364 nt1.98□□□□□ -2.09
RPL42BP0CX28 MGM1YOR211C 2646 nt1.97□□□□□ -2.09
RPL42BP0CX28 Q0032Q0032 291 nt1.97□□□□□ -2.09
RPL42BP0CX28 snR60snR60 104 nt1.97□□□□□ -2.09
RPL42BP0CX28 YGL041CYGL041C 204 nt1.97□□□□□ -2.09
RPL42BP0CX28 CYB5YNL111C 363 nt1.97□□□□□ -2.09
RPL42BP0CX28 YBL083CYBL083C 426 nt1.97□□□□□ -2.09
RPL42BP0CX28 IRR1YIL026C 3453 nt1.97□□□□□ -2.09
RPL42BP0CX28 SMY2YBR172C 2223 nt1.97□□□□□ -2.09
RPL42BP0CX28 YPL150WYPL150W 2706 nt1.97□□□□□ -2.09
RPL42BP0CX28 MVP1YMR004W 1536 nt1.96□□□□□ -2.09
RPL42BP0CX28 YIL080WYIL080W 4722 nt1.96□□□□□ -2.1
RPL42BP0CX28 PXA2YKL188C 2562 nt1.96□□□□□ -2.1
RPL42BP0CX28 SLM1YIL105C 2061 nt1.96□□□□□ -2.1
RPL42BP0CX28 snR55snR55 98 nt1.96□□□□□ -2.1
RPL42BP0CX28 YGL007C-AYGL007C-A 87 nt1.96□□□□□ -2.1
RPL42BP0CX28 RPL42BYHR141C 321 nt1.96□□□□□ -2.1
RPL42BP0CX28 RPL42AYNL162W 321 nt1.96□□□□□ -2.1
RPL42BP0CX28 snR43snR43 209 nt1.96□□□□□ -2.1
RPL42BP0CX28 SET2YJL168C 2202 nt1.96□□□□□ -2.1
RPL42BP0CX28 TRS130YMR218C 3309 nt1.96□□□□□ -2.1
RPL42BP0CX28 MUK1YPL070W 1839 nt1.96□□□□□ -2.1
RPL42BP0CX28 SPF1YEL031W 3648 nt1.96□□□□□ -2.1
RPL42BP0CX28 ARP8YOR141C 2646 nt1.95□□□□□ -2.1
RPL42BP0CX28 SWA2YDR320C 2007 nt1.95□□□□□ -2.1
RPL42BP0CX28 YMR230W-AYMR230W-A 189 nt1.95□□□□□ -2.1
RPL42BP0CX28 YMR307C-AYMR307C-A 195 nt1.95□□□□□ -2.1
RPL42BP0CX28 KTI11YBL071W-A 249 nt1.95□□□□□ -2.1
RPL42BP0CX28 RPH1YER169W 2391 nt1.95□□□□□ -2.1
RPL42BP0CX28 TUS1YLR425W 3924 nt1.95□□□□□ -2.1
RPL42BP0CX28 LCD1YDR499W 2244 nt1.94□□□□□ -2.1
RPL42BP0CX28 YDR286CYDR286C 345 nt1.94□□□□□ -2.1
RPL42BP0CX28 APQ12YIL040W 417 nt1.94□□□□□ -2.1
RPL42BP0CX28 YNL028WYNL028W 318 nt1.94□□□□□ -2.1
RPL42BP0CX28 INP2YMR163C 2118 nt1.94□□□□□ -2.1
RPL42BP0CX28 SEC16YPL085W 6588 nt1.94□□□□□ -2.1
RPL42BP0CX28 BUB1YGR188C 3066 nt1.94□□□□□ -2.1
RPL42BP0CX28 VPS13YLL040C 9435 nt1.93□□□□□ -2.1
RPL42BP0CX28 SSQ1YLR369W 1974 nt1.93□□□□□ -2.1
RPL42BP0CX28 RPS29AYLR388W 171 nt1.93□□□□□ -2.1
RPL42BP0CX28 YMR172C-AYMR172C-A 384 nt1.93□□□□□ -2.1
RPL42BP0CX28 VTC3YPL019C 2508 nt1.93□□□□□ -2.1
RPL42BP0CX28 SLY1YDR189W 2001 nt1.93□□□□□ -2.1
RPL42BP0CX28 VMR1YHL035C 4779 nt1.93□□□□□ -2.1
RPL42BP0CX28 NUP100YKL068W 2880 nt1.92□□□□□ -2.1
RPL42BP0CX28 APC9YLR102C 798 nt1.92□□□□□ -2.1
RPL42BP0CX28 YMR141W-AYMR141W-A 225 nt1.92□□□□□ -2.1
RPL42BP0CX28 ACM1YPL267W 630 nt1.92□□□□□ -2.1
RPL42BP0CX28 MLH1YMR167W 2310 nt1.92□□□□□ -2.1
RPL42BP0CX28 YCK3YER123W 1575 nt1.92□□□□□ -2.1
RPL42BP0CX28 PLC1YPL268W 2610 nt1.92□□□□□ -2.1
RPL42BP0CX28 FAR11YNL127W 2862 nt1.92□□□□□ -2.1
RPL42BP0CX28 TOR1YJR066W 7413 nt1.91□□□□□ -2.1
RPL42BP0CX28 YKU80YMR106C 1890 nt1.91□□□□□ -2.1
RPL42BP0CX28 YCR043CYCR043C 384 nt1.91□□□□□ -2.1
RPL42BP0CX28 YLR012CYLR012C 300 nt1.91□□□□□ -2.1
RPL42BP0CX28 CSE2YNR010W 450 nt1.91□□□□□ -2.1
RPL42BP0CX28 PDR1YGL013C 3207 nt1.91□□□□□ -2.1
RPL42BP0CX28 TOP2YNL088W 4287 nt1.91□□□□□ -2.1
RPL42BP0CX28 SWI5YDR146C 2130 nt1.91□□□□□ -2.1
RPL42BP0CX28 SGM1YJR134C 2124 nt1.91□□□□□ -2.1
RPL42BP0CX28 PTP3YER075C 2787 nt1.91□□□□□ -2.1
RPL42BP0CX28 RFX1YLR176C 2436 nt1.9□□□□□ -2.1
RPL42BP0CX28 SVL3YPL032C 2478 nt1.9□□□□□ -2.11
RPL42BP0CX28 GPG1YGL121C 381 nt1.9□□□□□ -2.11
RPL42BP0CX28 YJL197C-AYJL197C-A 282 nt1.9□□□□□ -2.11
RPL42BP0CX28 YOR394C-AYOR394C-A 168 nt1.9□□□□□ -2.11
RPL42BP0CX28 YCL023CYCL023C 348 nt1.9□□□□□ -2.11
RPL42BP0CX28 SMC6YLR383W 3345 nt1.9□□□□□ -2.11
RPL42BP0CX28 MET18YIL128W 3099 nt1.89□□□□□ -2.11
RPL42BP0CX28 PSD2YGR170W 3417 nt1.89□□□□□ -2.11
RPL42BP0CX28 FKS3YMR306W 5358 nt1.89□□□□□ -2.11
RPL42BP0CX28 YGL052WYGL052W 306 nt1.89□□□□□ -2.11
RPL42BP0CX28 EMP24YGL200C 612 nt1.89□□□□□ -2.11
RPL42BP0CX28 IES4YOR189W 351 nt1.89□□□□□ -2.11
RPL42BP0CX28 RPB10YOR210W 213 nt1.89□□□□□ -2.11
RPL42BP0CX28 MDM20YOL076W 2391 nt1.89□□□□□ -2.11
RPL42BP0CX28 VIK1YPL253C 1944 nt1.89□□□□□ -2.11
RPL42BP0CX28 YLL032CYLL032C 2478 nt1.88□□□□□ -2.11
RPL42BP0CX28 PDR11YIL013C 4236 nt1.88□□□□□ -2.11
RPL42BP0CX28 SSS1YDR086C 243 nt1.88□□□□□ -2.11
RPL42BP0CX28 PAU2YEL049W 363 nt1.88□□□□□ -2.11
RPL42BP0CX28 PAM16YJL104W 450 nt1.88□□□□□ -2.11
RPL42BP0CX28 YOR055WYOR055W 435 nt1.88□□□□□ -2.11
RPL42BP0CX28 MNE1YOR350C 1992 nt1.88□□□□□ -2.11
RPL42BP0CX28 VPS8YAL002W 3825 nt1.88□□□□□ -2.11
RPL42BP0CX28 ISW1YBR245C 3390 nt1.87□□□□□ -2.11
RPL42BP0CX28 SPT21YMR179W 2277 nt1.87□□□□□ -2.11
RPL42BP0CX28 YCR102W-AYCR102W-A 198 nt1.87□□□□□ -2.11
RPL42BP0CX28 YHR073W-AYHR073W-A 177 nt1.87□□□□□ -2.11
RPL42BP0CX28 YLR120W-AYLR120W-A 102 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 89.9 ms