Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC31.77■■■□□ 2.68
ARID3CA6NKF2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
ARID3CA6NKF2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ARID3CA6NKF2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
ARID3CA6NKF2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
ARID3CA6NKF2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC31.76■■■□□ 2.68
ARID3CA6NKF2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
ARID3CA6NKF2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
ARID3CA6NKF2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC31.76■■■□□ 2.67
ARID3CA6NKF2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC31.76■■■□□ 2.67
ARID3CA6NKF2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
ARID3CA6NKF2 DUT-205ENST00000558813 769 ntTSL 2 BASIC31.76■■■□□ 2.67
ARID3CA6NKF2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC31.76■■■□□ 2.67
ARID3CA6NKF2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
ARID3CA6NKF2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
ARID3CA6NKF2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC31.75■■■□□ 2.67
ARID3CA6NKF2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
ARID3CA6NKF2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ARID3CA6NKF2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
ARID3CA6NKF2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC31.75■■■□□ 2.67
ARID3CA6NKF2 AC073195.1-201ENST00000607241 877 ntBASIC31.75■■■□□ 2.67
ARID3CA6NKF2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ARID3CA6NKF2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ARID3CA6NKF2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
ARID3CA6NKF2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
ARID3CA6NKF2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
ARID3CA6NKF2 NUDT16P1-203ENST00000513809 620 ntBASIC31.74■■■□□ 2.67
ARID3CA6NKF2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
ARID3CA6NKF2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.74■■■□□ 2.67
ARID3CA6NKF2 AL590326.2-201ENST00000625139 305 ntBASIC31.74■■■□□ 2.67
ARID3CA6NKF2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARID3CA6NKF2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ARID3CA6NKF2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 LINC01568-207ENST00000641790 1380 ntBASIC31.71■■■□□ 2.67
ARID3CA6NKF2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
ARID3CA6NKF2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 AL353807.1-201ENST00000427475 662 ntBASIC31.7■■■□□ 2.67
ARID3CA6NKF2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 AL031963.3-201ENST00000606441 850 ntBASIC31.7■■■□□ 2.67
ARID3CA6NKF2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC31.7■■■□□ 2.67
ARID3CA6NKF2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
ARID3CA6NKF2 AC242852.2-201ENST00000615738 1807 ntBASIC31.7■■■□□ 2.66
ARID3CA6NKF2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
ARID3CA6NKF2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ARID3CA6NKF2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
ARID3CA6NKF2 UNC93B2-201ENST00000285383 730 ntBASIC31.68■■■□□ 2.66
ARID3CA6NKF2 AC113347.1-201ENST00000413321 391 ntBASIC31.68■■■□□ 2.66
ARID3CA6NKF2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC31.68■■■□□ 2.66
ARID3CA6NKF2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC31.68■■■□□ 2.66
ARID3CA6NKF2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ARID3CA6NKF2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ARID3CA6NKF2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC31.68■■■□□ 2.66
ARID3CA6NKF2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.68■■■□□ 2.66
ARID3CA6NKF2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
ARID3CA6NKF2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC31.67■■■□□ 2.66
ARID3CA6NKF2 GOLGA2P6-201ENST00000340929 2049 ntBASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms