RNA–Protein interactions for RNA: ENST00000370554.5

SELENOF-202, Transcript of selenoprotein F, humanhuman

TSL 1 (best) BASIC

Gene SELENOF, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-202ENST00000370554 NISCHQ9Y2I1 1504 aa46.95■■■■■ 5.11
SELENOF-202ENST00000370554 ABCC9O60706 1549 aa42.12■■■■■ 4.33
SELENOF-202ENST00000370554 CCDC180Q9P1Z9 1646 aa41.99■■■■■ 4.31
SELENOF-202ENST00000370554 RB1CC1Q8TDY2 1594 aa40.01■■■■■ 4
SELENOF-202ENST00000370554 DCAF8L2P0C7V8 631 aa39.79■■■■□ 3.96
SELENOF-202ENST00000370554 NACADO15069 1562 aa39.75■■■■□ 3.95
SELENOF-202ENST00000370554 DNAJC5BQ9UF47 199 aa39.53■■■■□ 3.92
SELENOF-202ENST00000370554 PABPN1Q86U42 306 aaKnown RBP eCLIP39.3■■■■□ 3.88
SELENOF-202ENST00000370554 MYO15BQ96JP2 1530 aa39.18■■■■□ 3.86
SELENOF-202ENST00000370554 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
SELENOF-202ENST00000370554 ZCCHC6Q5VYS8 1495 aaKnown RBP38.88■■■■□ 3.81
SELENOF-202ENST00000370554 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
SELENOF-202ENST00000370554 DCAF1Q9Y4B6 1507 aa38.71■■■■□ 3.79
SELENOF-202ENST00000370554 SCRIBQ14160 1630 aa38.38■■■■□ 3.73
SELENOF-202ENST00000370554 SHROOM4Q9ULL8 1493 aa38.25■■■■□ 3.71
SELENOF-202ENST00000370554 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
SELENOF-202ENST00000370554 CECR2Q9BXF3 1484 aa37.9■■■■□ 3.66
SELENOF-202ENST00000370554 EIF4G1Q04637 1599 aaKnown RBP37.9■■■■□ 3.66
SELENOF-202ENST00000370554 NCAPD3P42695 1498 aa36.74■■■■□ 3.47
SELENOF-202ENST00000370554 ATAD2BQ9ULI0 1458 aa36.64■■■■□ 3.46
SELENOF-202ENST00000370554 SMARCA4P51532 1647 aa36.57■■■■□ 3.44
SELENOF-202ENST00000370554 SMARCA2P51531 1590 aa36.49■■■■□ 3.43
SELENOF-202ENST00000370554 BAZ1AQ9NRL2 1556 aaPredicted RBP36.4■■■■□ 3.42
SELENOF-202ENST00000370554 HMGXB3Q12766 1538 aa36.4■■■■□ 3.42
SELENOF-202ENST00000370554 ERCC6Q03468 1493 aa36.33■■■■□ 3.41
SELENOF-202ENST00000370554 BAZ1BQ9UIG0 1483 aaKnown RBP36.29■■■■□ 3.4
SELENOF-202ENST00000370554 DNAJC5Q9H3Z4 198 aa36.22■■■■□ 3.39
SELENOF-202ENST00000370554 MROH2BQ7Z745 1585 aa36.2■■■■□ 3.39
SELENOF-202ENST00000370554 NESP48681 1621 aa36.19■■■■□ 3.38
SELENOF-202ENST00000370554 CUX2O14529 1486 aa36.18■■■■□ 3.38
SELENOF-202ENST00000370554 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
SELENOF-202ENST00000370554 LAMC3Q9Y6N6 1575 aa35.85■■■■□ 3.33
SELENOF-202ENST00000370554 WIZO95785 1651 aa35.75■■■■□ 3.31
SELENOF-202ENST00000370554 THOC2Q8NI27 1593 aaKnown RBP35.71■■■■□ 3.31
SELENOF-202ENST00000370554 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
SELENOF-202ENST00000370554 CADPSQ9ULU8 1353 aa35.65■■■■□ 3.3
SELENOF-202ENST00000370554 KIF21AQ7Z4S6 1674 aa35.63■■■■□ 3.29
SELENOF-202ENST00000370554 RSF1Q96T23 1441 aaPredicted RBP35.49■■■■□ 3.27
SELENOF-202ENST00000370554 MRC2Q9UBG0 1479 aa35.37■■■■□ 3.25
SELENOF-202ENST00000370554 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
SELENOF-202ENST00000370554 WDR62O43379 1518 aa35.25■■■■□ 3.23
SELENOF-202ENST00000370554 CEP164Q9UPV0 1460 aa35.24■■■■□ 3.23
SELENOF-202ENST00000370554 FANCD2Q9BXW9 1451 aa35.23■■■■□ 3.23
SELENOF-202ENST00000370554 CFTRP13569 1480 aa35.22■■■■□ 3.23
SELENOF-202ENST00000370554 URB2Q14146 1524 aaKnown RBP34.95■■■■□ 3.19
SELENOF-202ENST00000370554 CCDC88BA6NC98 1476 aa34.94■■■■□ 3.18
SELENOF-202ENST00000370554 PRDM2Q13029 1718 aa34.74■■■■□ 3.15
SELENOF-202ENST00000370554 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
SELENOF-202ENST00000370554 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
SELENOF-202ENST00000370554 TOPBP1Q92547 1522 aa34.57■■■■□ 3.12
SELENOF-202ENST00000370554 IFT140Q96RY7 1462 aa34.54■■■■□ 3.12
SELENOF-202ENST00000370554 ZNF608Q9ULD9 1512 aaPredicted RBP34.53■■■■□ 3.12
SELENOF-202ENST00000370554 ABCC8Q09428 1581 aa34.46■■■■□ 3.11
SELENOF-202ENST00000370554 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
SELENOF-202ENST00000370554 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
SELENOF-202ENST00000370554 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.07
SELENOF-202ENST00000370554 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
SELENOF-202ENST00000370554 POLA1P09884 1462 aaPredicted RBP34.21■■■■□ 3.07
SELENOF-202ENST00000370554 RAD54L2Q9Y4B4 1467 aa34.14■■■■□ 3.06
SELENOF-202ENST00000370554 SOGA1O94964 1423 aa34.12■■■■□ 3.05
SELENOF-202ENST00000370554 RIMBP3CA6NJZ7 1639 aa34.11■■■■□ 3.05
SELENOF-202ENST00000370554 RIMBP3BA6NNM3 1639 aa34.11■■■■□ 3.05
SELENOF-202ENST00000370554 RIMBP3Q9UFD9 1639 aa34.11■■■■□ 3.05
SELENOF-202ENST00000370554 SUPT5HO00267 1087 aaKnown RBP34.09■■■■□ 3.05
SELENOF-202ENST00000370554 FBLN2P98095 1184 aa34.08■■■■□ 3.05
SELENOF-202ENST00000370554 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
SELENOF-202ENST00000370554 FGD5Q6ZNL6 1462 aa34.02■■■■□ 3.04
SELENOF-202ENST00000370554 ARHGEF11O15085 1522 aa34.02■■■■□ 3.04
SELENOF-202ENST00000370554 CUX1P39880 1505 aa33.99■■■■□ 3.03
SELENOF-202ENST00000370554 CHD1O14646 1710 aa33.99■■■■□ 3.03
SELENOF-202ENST00000370554 CYB5RLQ6IPT4 315 aa33.89■■■■□ 3.02
SELENOF-202ENST00000370554 SNAPC4Q5SXM2 1469 aa33.85■■■■□ 3.01
SELENOF-202ENST00000370554 WDR97A6NE52 1622 aa33.8■■■■□ 3
SELENOF-202ENST00000370554 CHMP7Q8WUX9 453 aaPredicted RBP33.8■■■■□ 3
SELENOF-202ENST00000370554 GRIN2BQ13224 1484 aa33.76■■■■□ 3
SELENOF-202ENST00000370554 MAGI1Q96QZ7 1491 aaPredicted RBP33.73■■■□□ 2.99
SELENOF-202ENST00000370554 ARAP1Q96P48 1450 aa33.7■■■□□ 2.99
SELENOF-202ENST00000370554 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
SELENOF-202ENST00000370554 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
SELENOF-202ENST00000370554 CLASP1Q7Z460 1538 aa33.62■■■□□ 2.97
SELENOF-202ENST00000370554 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
SELENOF-202ENST00000370554 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
SELENOF-202ENST00000370554 PBRM1Q86U86 1689 aa33.56■■■□□ 2.96
SELENOF-202ENST00000370554 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
SELENOF-202ENST00000370554 ABCA5Q8WWZ7 1642 aa33.52■■■□□ 2.96
SELENOF-202ENST00000370554 TRHP20396 242 aaPredicted RBP33.5■■■□□ 2.95
SELENOF-202ENST00000370554 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
SELENOF-202ENST00000370554 BIVM-ERCC5R4GMW8 1640 aa33.4■■■□□ 2.94
SELENOF-202ENST00000370554 GRIN2AQ12879 1464 aa33.32■■■□□ 2.92
SELENOF-202ENST00000370554 ADAMTS12P58397 1594 aa33.27■■■□□ 2.92
SELENOF-202ENST00000370554 FHAD1B1AJZ9 1412 aa33.23■■■□□ 2.91
SELENOF-202ENST00000370554 NUP160Q12769 1436 aa33.2■■■□□ 2.91
SELENOF-202ENST00000370554 CEP170Q5SW79 1584 aa33.19■■■□□ 2.9
SELENOF-202ENST00000370554 ERICH3Q5RHP9 1530 aa33.17■■■□□ 2.9
SELENOF-202ENST00000370554 ERCC6L2Q5T890 1561 aa33.17■■■□□ 2.9
SELENOF-202ENST00000370554 SHROOM2Q13796 1616 aa33■■■□□ 2.87
SELENOF-202ENST00000370554 JPH4Q96JJ6 628 aa32.96■■■□□ 2.87
SELENOF-202ENST00000370554 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
SELENOF-202ENST00000370554 IGF1RP08069 1367 aa32.85■■■□□ 2.85
SELENOF-202ENST00000370554 KIF27Q86VH2 1401 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms