RNA–Protein interactions for RNA: ENST00000390636.2

IGHV3-73-201, Transcript of immunoglobulin heavy variable 3-73, humanhuman

APPRIS P1 BASIC

Gene IGHV3-73, Length 437 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-73-201ENST00000390636 NISCHQ9Y2I1 1504 aa47.43■■■■■ 5.18
IGHV3-73-201ENST00000390636 CCDC180Q9P1Z9 1646 aa42.32■■■■■ 4.37
IGHV3-73-201ENST00000390636 ABCC9O60706 1549 aa41.65■■■■■ 4.26
IGHV3-73-201ENST00000390636 RB1CC1Q8TDY2 1594 aa40.01■■■■□ 3.99
IGHV3-73-201ENST00000390636 NACADO15069 1562 aa39.9■■■■□ 3.98
IGHV3-73-201ENST00000390636 DCAF8L2P0C7V8 631 aa39.83■■■■□ 3.97
IGHV3-73-201ENST00000390636 MYO15BQ96JP2 1530 aa39.58■■■■□ 3.93
IGHV3-73-201ENST00000390636 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
IGHV3-73-201ENST00000390636 DCAF1Q9Y4B6 1507 aa39.27■■■■□ 3.88
IGHV3-73-201ENST00000390636 UNC13AQ9UPW8 1703 aa39.01■■■■□ 3.84
IGHV3-73-201ENST00000390636 PABPN1Q86U42 306 aaKnown RBP eCLIP38.9■■■■□ 3.82
IGHV3-73-201ENST00000390636 BICRAQ9NZM4 1560 aa38.72■■■■□ 3.79
IGHV3-73-201ENST00000390636 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
IGHV3-73-201ENST00000390636 DNAJC5BQ9UF47 199 aa38.5■■■■□ 3.75
IGHV3-73-201ENST00000390636 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
IGHV3-73-201ENST00000390636 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.63
IGHV3-73-201ENST00000390636 CC2D2AQ9P2K1 1620 aa37.68■■■■□ 3.62
IGHV3-73-201ENST00000390636 CECR2Q9BXF3 1484 aa37.51■■■■□ 3.59
IGHV3-73-201ENST00000390636 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
IGHV3-73-201ENST00000390636 NCAPD3P42695 1498 aa36.82■■■■□ 3.48
IGHV3-73-201ENST00000390636 BAZ1AQ9NRL2 1556 aaPredicted RBP36.81■■■■□ 3.48
IGHV3-73-201ENST00000390636 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
IGHV3-73-201ENST00000390636 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
IGHV3-73-201ENST00000390636 HMGXB3Q12766 1538 aa36.58■■■■□ 3.45
IGHV3-73-201ENST00000390636 PEG3Q9GZU2 1588 aa36.52■■■■□ 3.44
IGHV3-73-201ENST00000390636 MROH2BQ7Z745 1585 aa36.5■■■■□ 3.43
IGHV3-73-201ENST00000390636 BAZ1BQ9UIG0 1483 aaKnown RBP36.44■■■■□ 3.42
IGHV3-73-201ENST00000390636 WIZO95785 1651 aa36.09■■■■□ 3.37
IGHV3-73-201ENST00000390636 RSF1Q96T23 1441 aaPredicted RBP36.01■■■■□ 3.36
IGHV3-73-201ENST00000390636 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
IGHV3-73-201ENST00000390636 NESP48681 1621 aa35.93■■■■□ 3.34
IGHV3-73-201ENST00000390636 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
IGHV3-73-201ENST00000390636 CUX2O14529 1486 aa35.73■■■■□ 3.31
IGHV3-73-201ENST00000390636 CADPSQ9ULU8 1353 aa35.73■■■■□ 3.31
IGHV3-73-201ENST00000390636 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
IGHV3-73-201ENST00000390636 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
IGHV3-73-201ENST00000390636 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
IGHV3-73-201ENST00000390636 THOC2Q8NI27 1593 aaKnown RBP35.46■■■■□ 3.27
IGHV3-73-201ENST00000390636 CFTRP13569 1480 aa35.43■■■■□ 3.26
IGHV3-73-201ENST00000390636 CCDC88BA6NC98 1476 aa35.31■■■■□ 3.24
IGHV3-73-201ENST00000390636 FANCD2Q9BXW9 1451 aa35.29■■■■□ 3.24
IGHV3-73-201ENST00000390636 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
IGHV3-73-201ENST00000390636 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
IGHV3-73-201ENST00000390636 WDR62O43379 1518 aa35.16■■■■□ 3.22
IGHV3-73-201ENST00000390636 PRDM2Q13029 1718 aa35.12■■■■□ 3.21
IGHV3-73-201ENST00000390636 DNAJC5Q9H3Z4 198 aa35.02■■■■□ 3.2
IGHV3-73-201ENST00000390636 URB2Q14146 1524 aaKnown RBP34.91■■■■□ 3.18
IGHV3-73-201ENST00000390636 SUPT5HO00267 1087 aaKnown RBP34.9■■■■□ 3.18
IGHV3-73-201ENST00000390636 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
IGHV3-73-201ENST00000390636 TOPBP1Q92547 1522 aa34.67■■■■□ 3.14
IGHV3-73-201ENST00000390636 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
IGHV3-73-201ENST00000390636 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
IGHV3-73-201ENST00000390636 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
IGHV3-73-201ENST00000390636 POLA1P09884 1462 aaPredicted RBP34.35■■■■□ 3.09
IGHV3-73-201ENST00000390636 TARBP1Q13395 1621 aaKnown RBP34.3■■■■□ 3.08
IGHV3-73-201ENST00000390636 OSCARQ8IYS5 282 aa34.27■■■■□ 3.08
IGHV3-73-201ENST00000390636 CUX1P39880 1505 aa34.26■■■■□ 3.08
IGHV3-73-201ENST00000390636 SOGA1O94964 1423 aa34.26■■■■□ 3.07
IGHV3-73-201ENST00000390636 FGD5Q6ZNL6 1462 aa34.22■■■■□ 3.07
IGHV3-73-201ENST00000390636 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
IGHV3-73-201ENST00000390636 RAD54L2Q9Y4B4 1467 aa34.19■■■■□ 3.06
IGHV3-73-201ENST00000390636 AQRO60306 1485 aaKnown RBP eCLIP34.17■■■■□ 3.06
IGHV3-73-201ENST00000390636 WDR97A6NE52 1622 aa34.1■■■■□ 3.05
IGHV3-73-201ENST00000390636 TDRD9Q8NDG6 1382 aaKnown RBP34.07■■■■□ 3.04
IGHV3-73-201ENST00000390636 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
IGHV3-73-201ENST00000390636 TOP2BQ02880 1626 aa33.93■■■■□ 3.02
IGHV3-73-201ENST00000390636 BIVM-ERCC5R4GMW8 1640 aa33.92■■■■□ 3.02
IGHV3-73-201ENST00000390636 ABCA10Q8WWZ4 1543 aa33.9■■■■□ 3.02
IGHV3-73-201ENST00000390636 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
IGHV3-73-201ENST00000390636 FBLN2P98095 1184 aa33.89■■■■□ 3.02
IGHV3-73-201ENST00000390636 CHD1O14646 1710 aa33.85■■■■□ 3.01
IGHV3-73-201ENST00000390636 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
IGHV3-73-201ENST00000390636 MAGI1Q96QZ7 1491 aaPredicted RBP33.84■■■■□ 3.01
IGHV3-73-201ENST00000390636 SYNJ1O43426 1573 aa33.84■■■■□ 3.01
IGHV3-73-201ENST00000390636 SNAPC4Q5SXM2 1469 aa33.83■■■■□ 3.01
IGHV3-73-201ENST00000390636 CHMP7Q8WUX9 453 aaPredicted RBP33.79■■■■□ 3
IGHV3-73-201ENST00000390636 ABCA5Q8WWZ7 1642 aa33.75■■■□□ 2.99
IGHV3-73-201ENST00000390636 PBRM1Q86U86 1689 aa33.74■■■□□ 2.99
IGHV3-73-201ENST00000390636 TRIM41Q8WV44 630 aa33.71■■■□□ 2.99
IGHV3-73-201ENST00000390636 SYNJ2O15056 1496 aa33.7■■■□□ 2.99
IGHV3-73-201ENST00000390636 RIMBP3CA6NJZ7 1639 aa33.62■■■□□ 2.97
IGHV3-73-201ENST00000390636 RIMBP3BA6NNM3 1639 aa33.62■■■□□ 2.97
IGHV3-73-201ENST00000390636 RIMBP3Q9UFD9 1639 aa33.62■■■□□ 2.97
IGHV3-73-201ENST00000390636 ARHGEF11O15085 1522 aa33.59■■■□□ 2.97
IGHV3-73-201ENST00000390636 ERICH3Q5RHP9 1530 aa33.51■■■□□ 2.95
IGHV3-73-201ENST00000390636 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
IGHV3-73-201ENST00000390636 FHAD1B1AJZ9 1412 aa33.46■■■□□ 2.95
IGHV3-73-201ENST00000390636 ADAMTS12P58397 1594 aa33.44■■■□□ 2.94
IGHV3-73-201ENST00000390636 GRIN2AQ12879 1464 aa33.43■■■□□ 2.94
IGHV3-73-201ENST00000390636 CYB5RLQ6IPT4 315 aa33.37■■■□□ 2.93
IGHV3-73-201ENST00000390636 KIF27Q86VH2 1401 aa33.35■■■□□ 2.93
IGHV3-73-201ENST00000390636 NUP160Q12769 1436 aa33.29■■■□□ 2.92
IGHV3-73-201ENST00000390636 ARAP1Q96P48 1450 aa33.28■■■□□ 2.92
IGHV3-73-201ENST00000390636 CEP170Q5SW79 1584 aa33.22■■■□□ 2.91
IGHV3-73-201ENST00000390636 IGF1RP08069 1367 aa33.21■■■□□ 2.91
IGHV3-73-201ENST00000390636 CUL7Q14999 1698 aa33.14■■■□□ 2.9
IGHV3-73-201ENST00000390636 SHROOM2Q13796 1616 aa33.06■■■□□ 2.88
IGHV3-73-201ENST00000390636 CARMIL1Q5VZK9 1371 aa33.04■■■□□ 2.88
IGHV3-73-201ENST00000390636 JPH4Q96JJ6 628 aa33.02■■■□□ 2.88
IGHV3-73-201ENST00000390636 RUSC2Q8N2Y8 1516 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms