RNA–Protein interactions for RNA: ENST00000358571.2

PFN3-201, Transcript of profilin 3, humanhuman

APPRIS P1 BASIC

Gene PFN3, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN3-201ENST00000358571 NISCHQ9Y2I1 1504 aa47.4■■■■■ 5.18
PFN3-201ENST00000358571 ABCC9O60706 1549 aa42.36■■■■■ 4.37
PFN3-201ENST00000358571 CCDC180Q9P1Z9 1646 aa42.28■■■■■ 4.36
PFN3-201ENST00000358571 RB1CC1Q8TDY2 1594 aa40.28■■■■■ 4.04
PFN3-201ENST00000358571 NACADO15069 1562 aa39.97■■■■□ 3.99
PFN3-201ENST00000358571 DNAJC5BQ9UF47 199 aa39.85■■■■□ 3.97
PFN3-201ENST00000358571 DCAF8L2P0C7V8 631 aa39.69■■■■□ 3.94
PFN3-201ENST00000358571 ZCCHC6Q5VYS8 1495 aaKnown RBP39.53■■■■□ 3.92
PFN3-201ENST00000358571 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
PFN3-201ENST00000358571 PABPN1Q86U42 306 aaKnown RBP eCLIP39.41■■■■□ 3.9
PFN3-201ENST00000358571 MYO15BQ96JP2 1530 aa39.39■■■■□ 3.9
PFN3-201ENST00000358571 DCAF1Q9Y4B6 1507 aa39.23■■■■□ 3.87
PFN3-201ENST00000358571 BICRAQ9NZM4 1560 aa39.15■■■■□ 3.86
PFN3-201ENST00000358571 SHROOM4Q9ULL8 1493 aa38.57■■■■□ 3.76
PFN3-201ENST00000358571 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
PFN3-201ENST00000358571 CC2D2AQ9P2K1 1620 aa38.29■■■■□ 3.72
PFN3-201ENST00000358571 EIF4G1Q04637 1599 aaKnown RBP38.18■■■■□ 3.7
PFN3-201ENST00000358571 CECR2Q9BXF3 1484 aa38.17■■■■□ 3.7
PFN3-201ENST00000358571 NCAPD3P42695 1498 aa36.9■■■■□ 3.5
PFN3-201ENST00000358571 ATAD2BQ9ULI0 1458 aa36.78■■■■□ 3.48
PFN3-201ENST00000358571 BAZ1AQ9NRL2 1556 aaPredicted RBP36.76■■■■□ 3.48
PFN3-201ENST00000358571 SMARCA4P51532 1647 aa36.76■■■■□ 3.48
PFN3-201ENST00000358571 SMARCA2P51531 1590 aa36.66■■■■□ 3.46
PFN3-201ENST00000358571 DNAJC5Q9H3Z4 198 aa36.65■■■■□ 3.46
PFN3-201ENST00000358571 HMGXB3Q12766 1538 aa36.63■■■■□ 3.45
PFN3-201ENST00000358571 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
PFN3-201ENST00000358571 CUX2O14529 1486 aa36.56■■■■□ 3.44
PFN3-201ENST00000358571 MROH2BQ7Z745 1585 aa36.52■■■■□ 3.44
PFN3-201ENST00000358571 BAZ1BQ9UIG0 1483 aaKnown RBP36.41■■■■□ 3.42
PFN3-201ENST00000358571 NESP48681 1621 aa36.38■■■■□ 3.41
PFN3-201ENST00000358571 PEG3Q9GZU2 1588 aa36.37■■■■□ 3.41
PFN3-201ENST00000358571 WIZO95785 1651 aa36.15■■■■□ 3.38
PFN3-201ENST00000358571 RSF1Q96T23 1441 aaPredicted RBP36.15■■■■□ 3.38
PFN3-201ENST00000358571 LAMC3Q9Y6N6 1575 aa36.1■■■■□ 3.37
PFN3-201ENST00000358571 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
PFN3-201ENST00000358571 KIF21AQ7Z4S6 1674 aa35.94■■■■□ 3.34
PFN3-201ENST00000358571 PDS5BQ9NTI5 1447 aa35.86■■■■□ 3.33
PFN3-201ENST00000358571 TOP2AP11388 1531 aaKnown RBP35.81■■■■□ 3.32
PFN3-201ENST00000358571 CADPSQ9ULU8 1353 aa35.76■■■■□ 3.32
PFN3-201ENST00000358571 MRC2Q9UBG0 1479 aa35.59■■■■□ 3.29
PFN3-201ENST00000358571 WDR62O43379 1518 aa35.52■■■■□ 3.28
PFN3-201ENST00000358571 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
PFN3-201ENST00000358571 SUPT5HO00267 1087 aaKnown RBP35.41■■■■□ 3.26
PFN3-201ENST00000358571 FANCD2Q9BXW9 1451 aa35.37■■■■□ 3.25
PFN3-201ENST00000358571 CFTRP13569 1480 aa35.35■■■■□ 3.25
PFN3-201ENST00000358571 CCDC88BA6NC98 1476 aa35.34■■■■□ 3.25
PFN3-201ENST00000358571 URB2Q14146 1524 aaKnown RBP35.11■■■■□ 3.21
PFN3-201ENST00000358571 PRDM2Q13029 1718 aa35.05■■■■□ 3.2
PFN3-201ENST00000358571 TRIM41Q8WV44 630 aa34.99■■■■□ 3.19
PFN3-201ENST00000358571 OSCARQ8IYS5 282 aa34.84■■■■□ 3.17
PFN3-201ENST00000358571 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
PFN3-201ENST00000358571 TOPBP1Q92547 1522 aa34.7■■■■□ 3.14
PFN3-201ENST00000358571 ZNF608Q9ULD9 1512 aaPredicted RBP34.69■■■■□ 3.14
PFN3-201ENST00000358571 ABCC8Q09428 1581 aa34.59■■■■□ 3.13
PFN3-201ENST00000358571 DNMBPQ6XZF7 1577 aa34.57■■■■□ 3.12
PFN3-201ENST00000358571 EIF4G3O43432 1585 aaKnown RBP34.51■■■■□ 3.12
PFN3-201ENST00000358571 RIMBP3CA6NJZ7 1639 aa34.46■■■■□ 3.11
PFN3-201ENST00000358571 RIMBP3BA6NNM3 1639 aa34.46■■■■□ 3.11
PFN3-201ENST00000358571 RIMBP3Q9UFD9 1639 aa34.46■■■■□ 3.11
PFN3-201ENST00000358571 TARBP1Q13395 1621 aaKnown RBP34.42■■■■□ 3.1
PFN3-201ENST00000358571 AQRO60306 1485 aaKnown RBP eCLIP34.35■■■■□ 3.09
PFN3-201ENST00000358571 POLA1P09884 1462 aaPredicted RBP34.33■■■■□ 3.09
PFN3-201ENST00000358571 ARHGEF11O15085 1522 aa34.32■■■■□ 3.08
PFN3-201ENST00000358571 CHD1O14646 1710 aa34.3■■■■□ 3.08
PFN3-201ENST00000358571 CUX1P39880 1505 aa34.25■■■■□ 3.07
PFN3-201ENST00000358571 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
PFN3-201ENST00000358571 SOGA1O94964 1423 aa34.15■■■■□ 3.06
PFN3-201ENST00000358571 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
PFN3-201ENST00000358571 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
PFN3-201ENST00000358571 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
PFN3-201ENST00000358571 FBLN2P98095 1184 aa34.1■■■■□ 3.05
PFN3-201ENST00000358571 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
PFN3-201ENST00000358571 CYB5RLQ6IPT4 315 aa34.04■■■■□ 3.04
PFN3-201ENST00000358571 BIVM-ERCC5R4GMW8 1640 aa34.03■■■■□ 3.04
PFN3-201ENST00000358571 TOP2BQ02880 1626 aa34.02■■■■□ 3.04
PFN3-201ENST00000358571 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
PFN3-201ENST00000358571 SNAPC4Q5SXM2 1469 aa34■■■■□ 3.03
PFN3-201ENST00000358571 ARAP1Q96P48 1450 aa33.98■■■■□ 3.03
PFN3-201ENST00000358571 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
PFN3-201ENST00000358571 CLASP1Q7Z460 1538 aa33.88■■■■□ 3.01
PFN3-201ENST00000358571 GRIN2BQ13224 1484 aa33.88■■■■□ 3.01
PFN3-201ENST00000358571 CHMP7Q8WUX9 453 aaPredicted RBP33.84■■■■□ 3.01
PFN3-201ENST00000358571 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
PFN3-201ENST00000358571 SYNJ2O15056 1496 aa33.79■■■■□ 3
PFN3-201ENST00000358571 PBRM1Q86U86 1689 aa33.79■■■■□ 3
PFN3-201ENST00000358571 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
PFN3-201ENST00000358571 ABCA5Q8WWZ7 1642 aa33.7■■■□□ 2.99
PFN3-201ENST00000358571 TRHP20396 242 aaPredicted RBP33.67■■■□□ 2.98
PFN3-201ENST00000358571 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
PFN3-201ENST00000358571 ADAMTS12P58397 1594 aa33.45■■■□□ 2.95
PFN3-201ENST00000358571 KIF27Q86VH2 1401 aa33.42■■■□□ 2.94
PFN3-201ENST00000358571 ERICH3Q5RHP9 1530 aa33.42■■■□□ 2.94
PFN3-201ENST00000358571 CEP170Q5SW79 1584 aa33.37■■■□□ 2.93
PFN3-201ENST00000358571 ERCC6L2Q5T890 1561 aa33.35■■■□□ 2.93
PFN3-201ENST00000358571 NUP160Q12769 1436 aa33.35■■■□□ 2.93
PFN3-201ENST00000358571 FHAD1B1AJZ9 1412 aa33.31■■■□□ 2.92
PFN3-201ENST00000358571 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
PFN3-201ENST00000358571 IGF1RP08069 1367 aa33.2■■■□□ 2.9
PFN3-201ENST00000358571 CUL7Q14999 1698 aa33.18■■■□□ 2.9
PFN3-201ENST00000358571 RUSC2Q8N2Y8 1516 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms