Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PPARGC1BQ86YN6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PPARGC1BQ86YN6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC31.93■■■□□ 2.7
PPARGC1BQ86YN6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
PPARGC1BQ86YN6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PPARGC1BQ86YN6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
PPARGC1BQ86YN6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PPARGC1BQ86YN6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 PKD1P6-201ENST00000343738 4769 ntBASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC31.92■■■□□ 2.7
PPARGC1BQ86YN6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 RARRES2P4-201ENST00000514074 484 ntBASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 MDK-213ENST00000617138 635 ntTSL 2 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PPARGC1BQ86YN6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
PPARGC1BQ86YN6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 AC006970.2-201ENST00000450065 779 ntBASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 AC105036.2-201ENST00000569468 176 ntBASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC31.89■■■□□ 2.7
PPARGC1BQ86YN6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC31.89■■■□□ 2.69
PPARGC1BQ86YN6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 CDV3P1-201ENST00000471403 739 ntBASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PPARGC1BQ86YN6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 AC112907.3-201ENST00000577781 2400 ntBASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 AC083906.2-201ENST00000511578 360 ntBASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PPARGC1BQ86YN6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
PPARGC1BQ86YN6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
PPARGC1BQ86YN6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms