RNA–Protein interactions for RNA: ENST00000467963.5

BRD9-202, Transcript of bromodomain containing 9, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BRD9, Length 2,156 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-202ENST00000467963 NISCHQ9Y2I1 1504 aa45.54■■■■■ 4.88
BRD9-202ENST00000467963 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
BRD9-202ENST00000467963 ZCCHC6Q5VYS8 1495 aaKnown RBP38.27■■■■□ 3.72
BRD9-202ENST00000467963 DCAF8L2P0C7V8 631 aa37.8■■■■□ 3.64
BRD9-202ENST00000467963 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
BRD9-202ENST00000467963 SHROOM4Q9ULL8 1493 aa37.44■■■■□ 3.58
BRD9-202ENST00000467963 ABCC9O60706 1549 aa37.34■■■■□ 3.57
BRD9-202ENST00000467963 MYO15BQ96JP2 1530 aa37.08■■■■□ 3.53
BRD9-202ENST00000467963 NACADO15069 1562 aa36.84■■■■□ 3.49
BRD9-202ENST00000467963 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
BRD9-202ENST00000467963 SCRIBQ14160 1630 aa36.48■■■■□ 3.43
BRD9-202ENST00000467963 SUPT5HO00267 1087 aaKnown RBP36.19■■■■□ 3.38
BRD9-202ENST00000467963 UNC13AQ9UPW8 1703 aa35.65■■■■□ 3.3
BRD9-202ENST00000467963 RSF1Q96T23 1441 aaPredicted RBP35.44■■■■□ 3.26
BRD9-202ENST00000467963 CECR2Q9BXF3 1484 aa35.38■■■■□ 3.25
BRD9-202ENST00000467963 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
BRD9-202ENST00000467963 BICRAQ9NZM4 1560 aa35.32■■■■□ 3.24
BRD9-202ENST00000467963 MROH2BQ7Z745 1585 aa35.19■■■■□ 3.22
BRD9-202ENST00000467963 BAZ1AQ9NRL2 1556 aaPredicted RBP35.16■■■■□ 3.22
BRD9-202ENST00000467963 SMARCA4P51532 1647 aa34.94■■■■□ 3.18
BRD9-202ENST00000467963 WIZO95785 1651 aa34.91■■■■□ 3.18
BRD9-202ENST00000467963 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
BRD9-202ENST00000467963 TOP2AP11388 1531 aaKnown RBP34.56■■■■□ 3.12
BRD9-202ENST00000467963 PEG3Q9GZU2 1588 aa34.47■■■■□ 3.11
BRD9-202ENST00000467963 ATAD2BQ9ULI0 1458 aa34.35■■■■□ 3.09
BRD9-202ENST00000467963 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
BRD9-202ENST00000467963 EIF4G1Q04637 1599 aaKnown RBP34.29■■■■□ 3.08
BRD9-202ENST00000467963 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
BRD9-202ENST00000467963 BAZ1BQ9UIG0 1483 aaKnown RBP34.21■■■■□ 3.07
BRD9-202ENST00000467963 NCAPD3P42695 1498 aa34.02■■■■□ 3.04
BRD9-202ENST00000467963 TRIM41Q8WV44 630 aa34.01■■■■□ 3.04
BRD9-202ENST00000467963 HMGXB3Q12766 1538 aa33.95■■■■□ 3.03
BRD9-202ENST00000467963 CC2D2AQ9P2K1 1620 aa33.73■■■□□ 2.99
BRD9-202ENST00000467963 ABCC8Q09428 1581 aa33.58■■■□□ 2.97
BRD9-202ENST00000467963 FAM9AQ8IZU1 332 aaPredicted RBP33.41■■■□□ 2.94
BRD9-202ENST00000467963 LOC105371045A0A1W2PR82 267 aa33.4■■■□□ 2.94
BRD9-202ENST00000467963 WRNQ14191 1432 aaPredicted RBP eCLIP33.39■■■□□ 2.947e-9■■□□□ 11.4
BRD9-202ENST00000467963 CFTRP13569 1480 aa33.32■■■□□ 2.92
BRD9-202ENST00000467963 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
BRD9-202ENST00000467963 SYNJ1O43426 1573 aa33.16■■■□□ 2.9
BRD9-202ENST00000467963 PRDM2Q13029 1718 aa33.06■■■□□ 2.88
BRD9-202ENST00000467963 SOGA1O94964 1423 aa33.03■■■□□ 2.88
BRD9-202ENST00000467963 EEA1Q15075 1411 aa33.03■■■□□ 2.88
BRD9-202ENST00000467963 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
BRD9-202ENST00000467963 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
BRD9-202ENST00000467963 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
BRD9-202ENST00000467963 CSRNP3Q8WYN3 585 aa32.89■■■□□ 2.86
BRD9-202ENST00000467963 CUX1P39880 1505 aa32.89■■■□□ 2.86
BRD9-202ENST00000467963 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
BRD9-202ENST00000467963 DNAJC5BQ9UF47 199 aa32.84■■■□□ 2.85
BRD9-202ENST00000467963 FANCD2Q9BXW9 1451 aa32.83■■■□□ 2.85
BRD9-202ENST00000467963 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.84
BRD9-202ENST00000467963 NESP48681 1621 aa32.81■■■□□ 2.84
BRD9-202ENST00000467963 PCGF6Q9BYE7 350 aa32.74■■■□□ 2.83
BRD9-202ENST00000467963 PDS5BQ9NTI5 1447 aa32.64■■■□□ 2.82
BRD9-202ENST00000467963 CEP164Q9UPV0 1460 aa32.61■■■□□ 2.81
BRD9-202ENST00000467963 GOLGA3Q08378 1498 aa32.59■■■□□ 2.81
BRD9-202ENST00000467963 UBTFP17480 764 aaKnown RBP32.56■■■□□ 2.8
BRD9-202ENST00000467963 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
BRD9-202ENST00000467963 DNMBPQ6XZF7 1577 aa32.54■■■□□ 2.8
BRD9-202ENST00000467963 TNIKQ9UKE5 1360 aa32.53■■■□□ 2.8
BRD9-202ENST00000467963 FGD5Q6ZNL6 1462 aa32.53■■■□□ 2.8
BRD9-202ENST00000467963 KIF21BO75037 1637 aa32.52■■■□□ 2.8
BRD9-202ENST00000467963 HRCP23327 699 aa32.5■■■□□ 2.79
BRD9-202ENST00000467963 TOPBP1Q92547 1522 aa32.47■■■□□ 2.79
BRD9-202ENST00000467963 CUX2O14529 1486 aa32.4■■■□□ 2.78
BRD9-202ENST00000467963 CEP162Q5TB80 1403 aa32.37■■■□□ 2.77
BRD9-202ENST00000467963 URB2Q14146 1524 aaKnown RBP32.37■■■□□ 2.77
BRD9-202ENST00000467963 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
BRD9-202ENST00000467963 RAPGEF2Q9Y4G8 1499 aa32.34■■■□□ 2.77
BRD9-202ENST00000467963 POLA1P09884 1462 aaPredicted RBP32.33■■■□□ 2.77
BRD9-202ENST00000467963 PRXQ9BXM0 1461 aa32.31■■■□□ 2.76
BRD9-202ENST00000467963 ERICH3Q5RHP9 1530 aa32.27■■■□□ 2.76
BRD9-202ENST00000467963 RAD54L2Q9Y4B4 1467 aa32.26■■■□□ 2.75
BRD9-202ENST00000467963 TRIM26Q12899 539 aaPredicted RBP32.24■■■□□ 2.75
BRD9-202ENST00000467963 ABCA10Q8WWZ4 1543 aa32.23■■■□□ 2.75
BRD9-202ENST00000467963 IGF1RP08069 1367 aa32.21■■■□□ 2.75
BRD9-202ENST00000467963 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
BRD9-202ENST00000467963 CLIP1P30622 1438 aa32.09■■■□□ 2.73
BRD9-202ENST00000467963 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
BRD9-202ENST00000467963 ERCC6Q03468 1493 aa32.05■■■□□ 2.72
BRD9-202ENST00000467963 WDR97A6NE52 1622 aa32.01■■■□□ 2.71
BRD9-202ENST00000467963 RANGAP1P46060 587 aaPredicted RBP32■■■□□ 2.71
BRD9-202ENST00000467963 TDRD9Q8NDG6 1382 aaKnown RBP31.97■■■□□ 2.71
BRD9-202ENST00000467963 WDR62O43379 1518 aa31.93■■■□□ 2.7
BRD9-202ENST00000467963 GAPVD1Q14C86 1478 aa31.92■■■□□ 2.7
BRD9-202ENST00000467963 TARBP1Q13395 1621 aaKnown RBP31.92■■■□□ 2.7
BRD9-202ENST00000467963 ABCA5Q8WWZ7 1642 aa31.9■■■□□ 2.7
BRD9-202ENST00000467963 CUL7Q14999 1698 aa31.89■■■□□ 2.7
BRD9-202ENST00000467963 PPARGC1BQ86YN6 1023 aaKnown RBP31.87■■■□□ 2.69
BRD9-202ENST00000467963 IFT140Q96RY7 1462 aa31.81■■■□□ 2.68
BRD9-202ENST00000467963 VPS8Q8N3P4 1428 aa31.81■■■□□ 2.68
BRD9-202ENST00000467963 THOC2Q8NI27 1593 aaKnown RBP31.75■■■□□ 2.67
BRD9-202ENST00000467963 AQRO60306 1485 aaKnown RBP eCLIP31.71■■■□□ 2.674e-7■■■■■ 37.4
BRD9-202ENST00000467963 APLP2Q06481 763 aa31.69■■■□□ 2.66
BRD9-202ENST00000467963 ARAP1Q96P48 1450 aa31.68■■■□□ 2.66
BRD9-202ENST00000467963 ARHGAP35Q9NRY4 1499 aa31.64■■■□□ 2.66
BRD9-202ENST00000467963 PBRM1Q86U86 1689 aa31.64■■■□□ 2.66
BRD9-202ENST00000467963 GRIN2BQ13224 1484 aa31.63■■■□□ 2.65
BRD9-202ENST00000467963 ZNF608Q9ULD9 1512 aaPredicted RBP31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms