Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.321e-6■□□□□ 10.7
CSTF2P33240 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.87□□□□□ -0.351e-6■□□□□ 10.7
CSTF2P33240 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.451e-6■□□□□ 10.7
CSTF2P33240 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.621e-6■□□□□ 10.7
CSTF2P33240 BET1-202ENST00000357520 3586 ntTSL 1 (best)6.4□□□□□ -1.391e-6■□□□□ 10.7
CSTF2P33240 GCC2-211ENST00000482325 6772 ntTSL 1 (best)5.25□□□□□ -1.571e-6■□□□□ 10.7
CSTF2P33240 BET1-207ENST00000471446 535 ntTSL 32.63□□□□□ -1.991e-6■□□□□ 10.7
CSTF2P33240 AC004980.1-202ENST00000450661 962 ntTSL 1 (best)23.63■■□□□ 1.372e-6■□□□□ 10.6
CSTF2P33240 AC004980.1-203ENST00000423084 748 ntTSL 322.64■■□□□ 1.212e-6■□□□□ 10.6
CSTF2P33240 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.92e-6■□□□□ 10.6
CSTF2P33240 RBM39-233ENST00000482563 1737 ntTSL 26.53□□□□□ -1.361e-12■□□□□ 10.6
CSTF2P33240 RBM39-235ENST00000490354 436 ntTSL 24.19□□□□□ -1.741e-12■□□□□ 10.6
CSTF2P33240 RBM39-241ENST00000496183 632 ntTSL 23.99□□□□□ -1.771e-12■□□□□ 10.6
CSTF2P33240 PROX1-204ENST00000471129 900 ntTSL 316.93■□□□□ 0.33e-6■□□□□ 10.6
CSTF2P33240 PROX1-206ENST00000607425 560 ntTSL 310.37□□□□□ -0.753e-6■□□□□ 10.6
CSTF2P33240 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.153e-6■□□□□ 10.6
CSTF2P33240 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.223e-6■□□□□ 10.6
CSTF2P33240 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.273e-6■□□□□ 10.6
CSTF2P33240 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.533e-6■□□□□ 10.6
CSTF2P33240 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.283e-6■□□□□ 10.6
CSTF2P33240 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.893e-6■□□□□ 10.6
CSTF2P33240 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.143e-6■□□□□ 10.6
CSTF2P33240 SEC23IP-203ENST00000446561 582 ntTSL 37.21□□□□□ -1.263e-6■□□□□ 10.6
CSTF2P33240 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.68□□□□□ -1.343e-6■□□□□ 10.6
CSTF2P33240 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.751e-6■□□□□ 10.6
CSTF2P33240 MAPK8-210ENST00000432379 907 ntTSL 317.34■□□□□ 0.371e-6■□□□□ 10.6
CSTF2P33240 MAPK8-208ENST00000426557 860 ntTSL 414.31□□□□□ -0.121e-6■□□□□ 10.6
CSTF2P33240 ZNF652-203ENST00000508237 4543 ntTSL 212.41□□□□□ -0.421e-6■□□□□ 10.6
CSTF2P33240 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.731e-6■□□□□ 10.6
CSTF2P33240 MAPK8-209ENST00000429041 603 ntTSL 510.39□□□□□ -0.751e-6■□□□□ 10.6
CSTF2P33240 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.811e-6■□□□□ 10.6
CSTF2P33240 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.311e-6■□□□□ 10.6
CSTF2P33240 MAPK8-215ENST00000476134 732 ntTSL 34.2□□□□□ -1.741e-6■□□□□ 10.6
CSTF2P33240 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.03□□□□□ -0.161e-6■□□□□ 10.6
CSTF2P33240 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC12.19□□□□□ -0.461e-6■□□□□ 10.6
CSTF2P33240 SLIRP-205ENST00000556310 626 ntTSL 211.27□□□□□ -0.611e-6■□□□□ 10.6
CSTF2P33240 SLIRP-206ENST00000556375 408 ntTSL 211.27□□□□□ -0.611e-6■□□□□ 10.6
CSTF2P33240 NHSL1-207ENST00000491526 506 ntAPPRIS ALT2 TSL 313.55□□□□□ -0.241e-6■□□□□ 10.6
CSTF2P33240 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.381e-6■□□□□ 10.6
CSTF2P33240 GPT2-204ENST00000562801 2092 ntTSL 214.13□□□□□ -0.156e-10■□□□□ 10.5
CSTF2P33240 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.245e-7■□□□□ 10.5
CSTF2P33240 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.81□□□□□ -0.525e-7■□□□□ 10.5
CSTF2P33240 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.99□□□□□ -1.456e-9■□□□□ 10.5
CSTF2P33240 RFC3-203ENST00000616236 612 ntTSL 34.62□□□□□ -1.676e-9■□□□□ 10.5
CSTF2P33240 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.692e-6■□□□□ 10.5
CSTF2P33240 GAS2-205ENST00000528582 736 ntTSL 317.19■□□□□ 0.342e-6■□□□□ 10.5
CSTF2P33240 GAS2-203ENST00000524701 2241 ntTSL 27.76□□□□□ -1.172e-6■□□□□ 10.5
CSTF2P33240 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.48□□□□□ -1.212e-6■□□□□ 10.5
CSTF2P33240 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.332e-6■□□□□ 10.5
CSTF2P33240 GAS2-206ENST00000532398 712 ntTSL 35.45□□□□□ -1.542e-6■□□□□ 10.5
CSTF2P33240 GAS2-209ENST00000534801 579 ntTSL 34.32□□□□□ -1.722e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-203ENST00000461304 2024 ntTSL 1 (best)21.11■□□□□ 0.971e-6■□□□□ 10.5
CSTF2P33240 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.45■□□□□ 0.71e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.31e-6■□□□□ 10.5
CSTF2P33240 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.281e-6■□□□□ 10.5
CSTF2P33240 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.111e-6■□□□□ 10.5
CSTF2P33240 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.61□□□□□ -0.071e-6■□□□□ 10.5
CSTF2P33240 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.191e-6■□□□□ 10.5
CSTF2P33240 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.21e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-204ENST00000494633 3820 ntTSL 213.11□□□□□ -0.311e-6■□□□□ 10.5
CSTF2P33240 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.61□□□□□ -0.391e-6■□□□□ 10.5
CSTF2P33240 GPT2-205ENST00000569193 3205 ntTSL 1 (best)12.24□□□□□ -0.451e-6■□□□□ 10.5
CSTF2P33240 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.621e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-202ENST00000461188 5195 ntTSL 29.82□□□□□ -0.841e-6■□□□□ 10.5
CSTF2P33240 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.841e-6■□□□□ 10.5
CSTF2P33240 TBCA-208ENST00000520361 446 ntTSL 2 BASIC9.15□□□□□ -0.941e-6■□□□□ 10.5
CSTF2P33240 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.68□□□□□ -1.021e-6■□□□□ 10.5
CSTF2P33240 CBX3-206ENST00000481057 860 ntTSL 26.56□□□□□ -1.361e-6■□□□□ 10.5
CSTF2P33240 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.26□□□□□ -1.411e-6■□□□□ 10.5
CSTF2P33240 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.35□□□□□ -1.551e-6■□□□□ 10.5
CSTF2P33240 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.571e-6■□□□□ 10.5
CSTF2P33240 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.92□□□□□ -1.621e-6■□□□□ 10.5
CSTF2P33240 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.46□□□□□ -1.861e-6■□□□□ 10.5
CSTF2P33240 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.393e-6■□□□□ 10.4
CSTF2P33240 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC12.07□□□□□ -0.483e-6■□□□□ 10.4
CSTF2P33240 COMMD10-204ENST00000507356 870 ntTSL 311.74□□□□□ -0.533e-6■□□□□ 10.4
CSTF2P33240 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.52□□□□□ -1.693e-6■□□□□ 10.4
CSTF2P33240 COMMD10-203ENST00000506589 793 ntTSL 52.14□□□□□ -2.073e-6■□□□□ 10.4
CSTF2P33240 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-6■□□□□ 10.4
CSTF2P33240 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.42□□□□□ -0.424e-6■□□□□ 10.4
CSTF2P33240 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.985e-11■□□□□ 10.4
CSTF2P33240 RPL13-210ENST00000562879 958 ntTSL 1 (best)14.88□□□□□ -0.035e-11■□□□□ 10.4
CSTF2P33240 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.97□□□□□ -0.175e-11■□□□□ 10.4
CSTF2P33240 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.545e-11■□□□□ 10.4
CSTF2P33240 RPL13-206ENST00000472354 631 ntTSL 310.73□□□□□ -0.695e-11■□□□□ 10.4
CSTF2P33240 C9orf3-222ENST00000496567 1575 ntTSL 520.89■□□□□ 0.949e-7■□□□□ 10.4
CSTF2P33240 CHD9-208ENST00000563410 488 ntTSL 220.77■□□□□ 0.922e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-216ENST00000471948 2119 ntTSL 220.57■□□□□ 0.884e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.874e-6■□□□□ 10.4
CSTF2P33240 HPN-208ENST00000600390 564 ntTSL 418.79■□□□□ 0.65e-12■□□□□ 10.4
CSTF2P33240 SH3YL1-213ENST00000463865 1999 ntTSL 517.96■□□□□ 0.474e-6■□□□□ 10.4
CSTF2P33240 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.182e-6■□□□□ 10.4
CSTF2P33240 HPN-205ENST00000596662 584 ntTSL 415.72■□□□□ 0.115e-12■□□□□ 10.4
CSTF2P33240 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.064e-6■□□□□ 10.4
CSTF2P33240 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.68□□□□□ -0.062e-6■□□□□ 10.4
CSTF2P33240 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.6□□□□□ -0.392e-6■□□□□ 10.4
CSTF2P33240 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.422e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-209ENST00000451005 782 ntTSL 512.02□□□□□ -0.494e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC11.41□□□□□ -0.584e-6■□□□□ 10.4
CSTF2P33240 A1CF-208ENST00000414883 885 ntTSL 510.67□□□□□ -0.72e-6■□□□□ 10.4
Retrieved 100 of 6,735 protein–RNA pairs in 181.5 ms