RNA–Protein interactions for RNA: ENST00000311528.9

RPL13-201, Transcript of ribosomal protein L13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-201ENST00000311528 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.21
RPL13-201ENST00000311528 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
RPL13-201ENST00000311528 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
RPL13-201ENST00000311528 ABCC9O60706 1549 aa20.44■□□□□ 0.86
RPL13-201ENST00000311528 SUPT5HO00267 1087 aaKnown RBP20.33■□□□□ 0.84
RPL13-201ENST00000311528 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
RPL13-201ENST00000311528 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.792e-10■□□□□ 10.4
RPL13-201ENST00000311528 MYT1Q01538 1121 aa19.86■□□□□ 0.77
RPL13-201ENST00000311528 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
RPL13-201ENST00000311528 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
RPL13-201ENST00000311528 HRCP23327 699 aa19.17■□□□□ 0.66
RPL13-201ENST00000311528 FAM9AQ8IZU1 332 aaPredicted RBP19.06■□□□□ 0.64
RPL13-201ENST00000311528 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
RPL13-201ENST00000311528 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
RPL13-201ENST00000311528 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
RPL13-201ENST00000311528 SCRIBQ14160 1630 aa18.84■□□□□ 0.61
RPL13-201ENST00000311528 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
RPL13-201ENST00000311528 CENPBP07199 599 aaPredicted RBP18.82■□□□□ 0.6
RPL13-201ENST00000311528 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
RPL13-201ENST00000311528 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
RPL13-201ENST00000311528 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
RPL13-201ENST00000311528 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
RPL13-201ENST00000311528 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
RPL13-201ENST00000311528 ATP1B4Q9UN42 357 aaPredicted RBP18.67■□□□□ 0.58
RPL13-201ENST00000311528 TRIM26Q12899 539 aaPredicted RBP18.65■□□□□ 0.58
RPL13-201ENST00000311528 FBLN2P98095 1184 aa18.63■□□□□ 0.57
RPL13-201ENST00000311528 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
RPL13-201ENST00000311528 CCER1Q8TC90 406 aaPredicted RBP18.6■□□□□ 0.57
RPL13-201ENST00000311528 NACADO15069 1562 aa18.52■□□□□ 0.56
RPL13-201ENST00000311528 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
RPL13-201ENST00000311528 APLP2Q06481 763 aa18.44■□□□□ 0.54
RPL13-201ENST00000311528 YTHDC1Q96MU7 727 aaKnown RBP18.39■□□□□ 0.53
RPL13-201ENST00000311528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
RPL13-201ENST00000311528 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
RPL13-201ENST00000311528 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
RPL13-201ENST00000311528 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
RPL13-201ENST00000311528 GTF3C3Q9Y5Q9 886 aa18.16■□□□□ 0.5
RPL13-201ENST00000311528 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
RPL13-201ENST00000311528 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
RPL13-201ENST00000311528 ACIN1Q9UKV3 1341 aaKnown RBP18.06■□□□□ 0.48
RPL13-201ENST00000311528 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
RPL13-201ENST00000311528 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
RPL13-201ENST00000311528 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
RPL13-201ENST00000311528 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
RPL13-201ENST00000311528 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
RPL13-201ENST00000311528 ARID3CA6NKF2 412 aa17.95■□□□□ 0.46
RPL13-201ENST00000311528 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
RPL13-201ENST00000311528 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
RPL13-201ENST00000311528 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
RPL13-201ENST00000311528 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
RPL13-201ENST00000311528 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
RPL13-201ENST00000311528 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
RPL13-201ENST00000311528 ITGAEP38570 1179 aa17.71■□□□□ 0.43
RPL13-201ENST00000311528 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
RPL13-201ENST00000311528 NEFLP07196 543 aa17.7■□□□□ 0.42
RPL13-201ENST00000311528 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
RPL13-201ENST00000311528 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
RPL13-201ENST00000311528 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
RPL13-201ENST00000311528 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
RPL13-201ENST00000311528 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
RPL13-201ENST00000311528 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.41
RPL13-201ENST00000311528 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
RPL13-201ENST00000311528 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
RPL13-201ENST00000311528 SMARCA2P51531 1590 aa17.52■□□□□ 0.4
RPL13-201ENST00000311528 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
RPL13-201ENST00000311528 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
RPL13-201ENST00000311528 BCANQ96GW7 911 aa17.46■□□□□ 0.39
RPL13-201ENST00000311528 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
RPL13-201ENST00000311528 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
RPL13-201ENST00000311528 ANP32EQ9BTT0 268 aa17.44■□□□□ 0.38
RPL13-201ENST00000311528 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
RPL13-201ENST00000311528 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
RPL13-201ENST00000311528 CC2D2AQ9P2K1 1620 aa17.38■□□□□ 0.37
RPL13-201ENST00000311528 FAM50AQ14320 339 aaKnown RBP17.36■□□□□ 0.37
RPL13-201ENST00000311528 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
RPL13-201ENST00000311528 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
RPL13-201ENST00000311528 CCDC88BA6NC98 1476 aa17.32■□□□□ 0.36
RPL13-201ENST00000311528 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
RPL13-201ENST00000311528 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
RPL13-201ENST00000311528 MIER1Q8N108 512 aa17.28■□□□□ 0.36
RPL13-201ENST00000311528 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
RPL13-201ENST00000311528 WIZO95785 1651 aa17.28■□□□□ 0.36
RPL13-201ENST00000311528 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
RPL13-201ENST00000311528 SOGA1O94964 1423 aa17.26■□□□□ 0.35
RPL13-201ENST00000311528 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
RPL13-201ENST00000311528 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
RPL13-201ENST00000311528 NESP48681 1621 aa17.25■□□□□ 0.35
RPL13-201ENST00000311528 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
RPL13-201ENST00000311528 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
RPL13-201ENST00000311528 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
RPL13-201ENST00000311528 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
RPL13-201ENST00000311528 CUX2O14529 1486 aa17.2■□□□□ 0.34
RPL13-201ENST00000311528 KIF27Q86VH2 1401 aa17.16■□□□□ 0.34
RPL13-201ENST00000311528 ARID4BQ4LE39 1312 aaPredicted RBP17.15■□□□□ 0.34
RPL13-201ENST00000311528 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
RPL13-201ENST00000311528 POLR3GLQ9BT43 218 aa17.12■□□□□ 0.33
RPL13-201ENST00000311528 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
RPL13-201ENST00000311528 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
RPL13-201ENST00000311528 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
RPL13-201ENST00000311528 FKBP8Q14318 412 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms