RNA–Protein interactions for RNA: ENST00000274458.8

COMMD10-201, Transcript of COMM domain containing 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD10, Length 1,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD10-201ENST00000274458 NISCHQ9Y2I1 1504 aa31.26■■■□□ 2.6
COMMD10-201ENST00000274458 ABCC9O60706 1549 aa27.89■■■□□ 2.06
COMMD10-201ENST00000274458 CCDC180Q9P1Z9 1646 aa27.87■■■□□ 2.05
COMMD10-201ENST00000274458 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
COMMD10-201ENST00000274458 RB1CC1Q8TDY2 1594 aa26.55■■□□□ 1.84
COMMD10-201ENST00000274458 NACADO15069 1562 aa26.41■■□□□ 1.82
COMMD10-201ENST00000274458 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
COMMD10-201ENST00000274458 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
COMMD10-201ENST00000274458 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
COMMD10-201ENST00000274458 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.74
COMMD10-201ENST00000274458 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
COMMD10-201ENST00000274458 DCAF1Q9Y4B6 1507 aa25.79■■□□□ 1.72
COMMD10-201ENST00000274458 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
COMMD10-201ENST00000274458 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
COMMD10-201ENST00000274458 SHROOM4Q9ULL8 1493 aa25.38■■□□□ 1.65
COMMD10-201ENST00000274458 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.61
COMMD10-201ENST00000274458 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
COMMD10-201ENST00000274458 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
COMMD10-201ENST00000274458 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
COMMD10-201ENST00000274458 ATAD2BQ9ULI0 1458 aa24.36■■□□□ 1.49
COMMD10-201ENST00000274458 SMARCA4P51532 1647 aa24.31■■□□□ 1.48
COMMD10-201ENST00000274458 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
COMMD10-201ENST00000274458 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
COMMD10-201ENST00000274458 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
COMMD10-201ENST00000274458 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
COMMD10-201ENST00000274458 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
COMMD10-201ENST00000274458 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
COMMD10-201ENST00000274458 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
COMMD10-201ENST00000274458 NESP48681 1621 aa23.98■■□□□ 1.43
COMMD10-201ENST00000274458 CUX2O14529 1486 aa23.93■■□□□ 1.42
COMMD10-201ENST00000274458 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
COMMD10-201ENST00000274458 WIZO95785 1651 aa23.79■■□□□ 1.4
COMMD10-201ENST00000274458 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
COMMD10-201ENST00000274458 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
COMMD10-201ENST00000274458 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
COMMD10-201ENST00000274458 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
COMMD10-201ENST00000274458 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.37
COMMD10-201ENST00000274458 THOC2Q8NI27 1593 aaKnown RBP23.58■■□□□ 1.37
COMMD10-201ENST00000274458 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
COMMD10-201ENST00000274458 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
COMMD10-201ENST00000274458 CFTRP13569 1480 aa23.43■■□□□ 1.34
COMMD10-201ENST00000274458 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
COMMD10-201ENST00000274458 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
COMMD10-201ENST00000274458 WDR62O43379 1518 aa23.34■■□□□ 1.33
COMMD10-201ENST00000274458 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
COMMD10-201ENST00000274458 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
COMMD10-201ENST00000274458 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
COMMD10-201ENST00000274458 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
COMMD10-201ENST00000274458 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
COMMD10-201ENST00000274458 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
COMMD10-201ENST00000274458 IFT140Q96RY7 1462 aa22.96■■□□□ 1.27
COMMD10-201ENST00000274458 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
COMMD10-201ENST00000274458 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
COMMD10-201ENST00000274458 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
COMMD10-201ENST00000274458 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
COMMD10-201ENST00000274458 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.24
COMMD10-201ENST00000274458 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
COMMD10-201ENST00000274458 SOGA1O94964 1423 aa22.74■■□□□ 1.23
COMMD10-201ENST00000274458 FBLN2P98095 1184 aa22.73■■□□□ 1.23
COMMD10-201ENST00000274458 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
COMMD10-201ENST00000274458 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
COMMD10-201ENST00000274458 EIF4G3O43432 1585 aaKnown RBP22.69■■□□□ 1.22
COMMD10-201ENST00000274458 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
COMMD10-201ENST00000274458 FGD5Q6ZNL6 1462 aa22.63■■□□□ 1.21
COMMD10-201ENST00000274458 CUX1P39880 1505 aa22.61■■□□□ 1.21
COMMD10-201ENST00000274458 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
COMMD10-201ENST00000274458 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
COMMD10-201ENST00000274458 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
COMMD10-201ENST00000274458 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
COMMD10-201ENST00000274458 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
COMMD10-201ENST00000274458 CHD1O14646 1710 aa22.5■■□□□ 1.19
COMMD10-201ENST00000274458 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
COMMD10-201ENST00000274458 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
COMMD10-201ENST00000274458 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
COMMD10-201ENST00000274458 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
COMMD10-201ENST00000274458 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
COMMD10-201ENST00000274458 GAPVD1Q14C86 1478 aa22.42■■□□□ 1.18
COMMD10-201ENST00000274458 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
COMMD10-201ENST00000274458 ABCA10Q8WWZ4 1543 aa22.38■■□□□ 1.17
COMMD10-201ENST00000274458 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
COMMD10-201ENST00000274458 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
COMMD10-201ENST00000274458 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
COMMD10-201ENST00000274458 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
COMMD10-201ENST00000274458 PBRM1Q86U86 1689 aa22.27■■□□□ 1.15
COMMD10-201ENST00000274458 ABCA5Q8WWZ7 1642 aa22.25■■□□□ 1.15
COMMD10-201ENST00000274458 CLASP1Q7Z460 1538 aa22.24■■□□□ 1.15
COMMD10-201ENST00000274458 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
COMMD10-201ENST00000274458 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
COMMD10-201ENST00000274458 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
COMMD10-201ENST00000274458 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.14
COMMD10-201ENST00000274458 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
COMMD10-201ENST00000274458 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
COMMD10-201ENST00000274458 NUP160Q12769 1436 aa22.06■■□□□ 1.12
COMMD10-201ENST00000274458 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
COMMD10-201ENST00000274458 JPH4Q96JJ6 628 aa22■■□□□ 1.11
COMMD10-201ENST00000274458 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
COMMD10-201ENST00000274458 IGF1RP08069 1367 aa21.95■■□□□ 1.11
COMMD10-201ENST00000274458 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
COMMD10-201ENST00000274458 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
COMMD10-201ENST00000274458 SHROOM2Q13796 1616 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms