RNA–Protein interactions for RNA: ENST00000471948.5

SH3YL1-216, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 2

Gene SH3YL1, Length 2,119 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-216ENST00000471948 NISCHQ9Y2I1 1504 aa47.14■■■■■ 5.14
SH3YL1-216ENST00000471948 CCDC180Q9P1Z9 1646 aa40.78■■■■■ 4.12
SH3YL1-216ENST00000471948 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.96
SH3YL1-216ENST00000471948 ABCC9O60706 1549 aa39.33■■■■□ 3.89
SH3YL1-216ENST00000471948 DCAF8L2P0C7V8 631 aa39.25■■■■□ 3.87
SH3YL1-216ENST00000471948 SHROOM4Q9ULL8 1493 aa39.18■■■■□ 3.86
SH3YL1-216ENST00000471948 DCAF1Q9Y4B6 1507 aa38.98■■■■□ 3.83
SH3YL1-216ENST00000471948 SUPT5HO00267 1087 aaKnown RBP38.23■■■■□ 3.71
SH3YL1-216ENST00000471948 NACADO15069 1562 aa38.16■■■■□ 3.7
SH3YL1-216ENST00000471948 MYO15BQ96JP2 1530 aa38.15■■■■□ 3.7
SH3YL1-216ENST00000471948 RB1CC1Q8TDY2 1594 aa37.95■■■■□ 3.67
SH3YL1-216ENST00000471948 SCRIBQ14160 1630 aa37.78■■■■□ 3.64
SH3YL1-216ENST00000471948 UNC13AQ9UPW8 1703 aa37.25■■■■□ 3.55
SH3YL1-216ENST00000471948 PABPN1Q86U42 306 aaKnown RBP eCLIP37.19■■■■□ 3.54
SH3YL1-216ENST00000471948 CHIC1Q5VXU3 224 aa37.17■■■■□ 3.54
SH3YL1-216ENST00000471948 RSF1Q96T23 1441 aaPredicted RBP36.99■■■■□ 3.51
SH3YL1-216ENST00000471948 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
SH3YL1-216ENST00000471948 CECR2Q9BXF3 1484 aa36.63■■■■□ 3.45
SH3YL1-216ENST00000471948 MROH2BQ7Z745 1585 aa36.46■■■■□ 3.43
SH3YL1-216ENST00000471948 BAZ1AQ9NRL2 1556 aaPredicted RBP36.3■■■■□ 3.4
SH3YL1-216ENST00000471948 WIZO95785 1651 aa36.2■■■■□ 3.39
SH3YL1-216ENST00000471948 SMARCA4P51532 1647 aa36.06■■■■□ 3.36
SH3YL1-216ENST00000471948 TRIM41Q8WV44 630 aa35.87■■■■□ 3.33
SH3YL1-216ENST00000471948 TOP2AP11388 1531 aaKnown RBP35.87■■■■□ 3.33
SH3YL1-216ENST00000471948 EIF4G1Q04637 1599 aaKnown RBP35.83■■■■□ 3.33
SH3YL1-216ENST00000471948 LOC105371045A0A1W2PR82 267 aa35.77■■■■□ 3.32
SH3YL1-216ENST00000471948 ATAD2BQ9ULI0 1458 aa35.63■■■■□ 3.29
SH3YL1-216ENST00000471948 SMARCA2P51531 1590 aa35.56■■■■□ 3.28
SH3YL1-216ENST00000471948 CCDC88BA6NC98 1476 aa35.54■■■■□ 3.28
SH3YL1-216ENST00000471948 PEG3Q9GZU2 1588 aa35.53■■■■□ 3.28
SH3YL1-216ENST00000471948 CC2D2AQ9P2K1 1620 aa35.44■■■■□ 3.26
SH3YL1-216ENST00000471948 BAZ1BQ9UIG0 1483 aaKnown RBP35.38■■■■□ 3.25
SH3YL1-216ENST00000471948 NCAPD3P42695 1498 aa35.31■■■■□ 3.24
SH3YL1-216ENST00000471948 DNAJC5BQ9UF47 199 aa35.24■■■■□ 3.23
SH3YL1-216ENST00000471948 FAM9AQ8IZU1 332 aaPredicted RBP35.23■■■■□ 3.23
SH3YL1-216ENST00000471948 PCGF6Q9BYE7 350 aa35.23■■■■□ 3.23
SH3YL1-216ENST00000471948 HMGXB3Q12766 1538 aa35.12■■■■□ 3.21
SH3YL1-216ENST00000471948 HRCP23327 699 aa35.1■■■■□ 3.21
SH3YL1-216ENST00000471948 ABCC8Q09428 1581 aa35.1■■■■□ 3.21
SH3YL1-216ENST00000471948 TRIM26Q12899 539 aaPredicted RBP35■■■■□ 3.19
SH3YL1-216ENST00000471948 EEA1Q15075 1411 aa34.85■■■■□ 3.17
SH3YL1-216ENST00000471948 WRNQ14191 1432 aaPredicted RBP eCLIP34.78■■■■□ 3.16
SH3YL1-216ENST00000471948 SOGA1O94964 1423 aa34.69■■■■□ 3.14
SH3YL1-216ENST00000471948 EHMT2Q96KQ7 1210 aa34.68■■■■□ 3.14
SH3YL1-216ENST00000471948 SYNJ1O43426 1573 aa34.57■■■■□ 3.12
SH3YL1-216ENST00000471948 CSRNP3Q8WYN3 585 aa34.55■■■■□ 3.12
SH3YL1-216ENST00000471948 TNIKQ9UKE5 1360 aa34.51■■■■□ 3.12
SH3YL1-216ENST00000471948 RUSC2Q8N2Y8 1516 aa34.49■■■■□ 3.11
SH3YL1-216ENST00000471948 CADPSQ9ULU8 1353 aa34.46■■■■□ 3.11
SH3YL1-216ENST00000471948 CFTRP13569 1480 aa34.45■■■■□ 3.11
SH3YL1-216ENST00000471948 NESP48681 1621 aa34.44■■■■□ 3.1
SH3YL1-216ENST00000471948 GOLGA3Q08378 1498 aa34.4■■■■□ 3.1
SH3YL1-216ENST00000471948 CEP162Q5TB80 1403 aa34.38■■■■□ 3.09
SH3YL1-216ENST00000471948 TOP2BQ02880 1626 aa34.35■■■■□ 3.09
SH3YL1-216ENST00000471948 KIF21BO75037 1637 aa34.31■■■■□ 3.08
SH3YL1-216ENST00000471948 CEP164Q9UPV0 1460 aa34.29■■■■□ 3.08
SH3YL1-216ENST00000471948 BIVM-ERCC5R4GMW8 1640 aa34.29■■■■□ 3.08
SH3YL1-216ENST00000471948 UBTFP17480 764 aaKnown RBP34.18■■■■□ 3.06
SH3YL1-216ENST00000471948 ZEB1P37275 1124 aaPredicted RBP34.16■■■■□ 3.06
SH3YL1-216ENST00000471948 LAMC3Q9Y6N6 1575 aa34.09■■■■□ 3.05
SH3YL1-216ENST00000471948 FANCD2Q9BXW9 1451 aa34.08■■■■□ 3.05
SH3YL1-216ENST00000471948 PPARGC1BQ86YN6 1023 aaKnown RBP34.08■■■■□ 3.05
SH3YL1-216ENST00000471948 PRDM2Q13029 1718 aa34.03■■■■□ 3.04
SH3YL1-216ENST00000471948 CUX1P39880 1505 aa34.03■■■■□ 3.04
SH3YL1-216ENST00000471948 RAPGEF2Q9Y4G8 1499 aa33.93■■■■□ 3.02
SH3YL1-216ENST00000471948 PDS5BQ9NTI5 1447 aa33.92■■■■□ 3.02
SH3YL1-216ENST00000471948 ERICH3Q5RHP9 1530 aa33.9■■■■□ 3.02
SH3YL1-216ENST00000471948 CLIP1P30622 1438 aa33.88■■■■□ 3.01
SH3YL1-216ENST00000471948 PRXQ9BXM0 1461 aa33.86■■■■□ 3.01
SH3YL1-216ENST00000471948 KIF21AQ7Z4S6 1674 aa33.84■■■■□ 3.01
SH3YL1-216ENST00000471948 KIF27Q86VH2 1401 aa33.8■■■■□ 3
SH3YL1-216ENST00000471948 VPS8Q8N3P4 1428 aa33.74■■■□□ 2.99
SH3YL1-216ENST00000471948 URB2Q14146 1524 aaKnown RBP33.72■■■□□ 2.99
SH3YL1-216ENST00000471948 TOPBP1Q92547 1522 aa33.66■■■□□ 2.98
SH3YL1-216ENST00000471948 ERCC6Q03468 1493 aa33.65■■■□□ 2.98
SH3YL1-216ENST00000471948 FGD5Q6ZNL6 1462 aa33.6■■■□□ 2.97
SH3YL1-216ENST00000471948 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
SH3YL1-216ENST00000471948 MRC2Q9UBG0 1479 aa33.51■■■□□ 2.96
SH3YL1-216ENST00000471948 RAD54L2Q9Y4B4 1467 aa33.51■■■□□ 2.95
SH3YL1-216ENST00000471948 TTBK1Q5TCY1 1321 aaPredicted RBP33.49■■■□□ 2.95
SH3YL1-216ENST00000471948 POLA1P09884 1462 aaPredicted RBP33.48■■■□□ 2.95
SH3YL1-216ENST00000471948 CUX2O14529 1486 aa33.48■■■□□ 2.95
SH3YL1-216ENST00000471948 ARAP1Q96P48 1450 aa33.42■■■□□ 2.94
SH3YL1-216ENST00000471948 IGF1RP08069 1367 aa33.42■■■□□ 2.94
SH3YL1-216ENST00000471948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.41■■■□□ 2.94
SH3YL1-216ENST00000471948 APLP2Q06481 763 aa33.41■■■□□ 2.94
SH3YL1-216ENST00000471948 CCER1Q8TC90 406 aaPredicted RBP33.41■■■□□ 2.94
SH3YL1-216ENST00000471948 THOC2Q8NI27 1593 aaKnown RBP33.32■■■□□ 2.92
SH3YL1-216ENST00000471948 WDR62O43379 1518 aa33.31■■■□□ 2.92
SH3YL1-216ENST00000471948 RANGAP1P46060 587 aaPredicted RBP33.28■■■□□ 2.92
SH3YL1-216ENST00000471948 CARMIL1Q5VZK9 1371 aa33.26■■■□□ 2.91
SH3YL1-216ENST00000471948 TDRD9Q8NDG6 1382 aaKnown RBP33.25■■■□□ 2.91
SH3YL1-216ENST00000471948 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
SH3YL1-216ENST00000471948 ARHGAP35Q9NRY4 1499 aa33.22■■■□□ 2.91
SH3YL1-216ENST00000471948 TARBP1Q13395 1621 aaKnown RBP33.14■■■□□ 2.9
SH3YL1-216ENST00000471948 AQRO60306 1485 aaKnown RBP eCLIP33.08■■■□□ 2.89
SH3YL1-216ENST00000471948 ZNF608Q9ULD9 1512 aaPredicted RBP33.07■■■□□ 2.89
SH3YL1-216ENST00000471948 WDR97A6NE52 1622 aa33.06■■■□□ 2.88
SH3YL1-216ENST00000471948 IFT140Q96RY7 1462 aa33.03■■■□□ 2.88
SH3YL1-216ENST00000471948 CUL7Q14999 1698 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms