RNA–Protein interactions for RNA: ENST00000543134.5

SEC23IP-208, Transcript of SEC23 interacting protein, humanhuman

TSL 5 BASIC

Gene SEC23IP, Length 1,461 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-208ENST00000543134 AEBP2Q6ZN18 517 aaPredicted RBP17.65■□□□□ 0.42
SEC23IP-208ENST00000543134 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
SEC23IP-208ENST00000543134 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
SEC23IP-208ENST00000543134 PHF23Q9BUL5 403 aaPredicted RBP15.38■□□□□ 0.05
SEC23IP-208ENST00000543134 ABCC9O60706 1549 aa15.2■□□□□ 0.02
SEC23IP-208ENST00000543134 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
SEC23IP-208ENST00000543134 CCDC180Q9P1Z9 1646 aa14.68□□□□□ -0.06
SEC23IP-208ENST00000543134 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
SEC23IP-208ENST00000543134 PLPPR3Q6T4P5 718 aa14.34□□□□□ -0.11
SEC23IP-208ENST00000543134 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.13
SEC23IP-208ENST00000543134 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
SEC23IP-208ENST00000543134 NACADO15069 1562 aa14.02□□□□□ -0.17
SEC23IP-208ENST00000543134 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
SEC23IP-208ENST00000543134 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
SEC23IP-208ENST00000543134 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
SEC23IP-208ENST00000543134 FOXD1Q16676 465 aa13.84□□□□□ -0.19
SEC23IP-208ENST00000543134 ZCCHC6Q5VYS8 1495 aaKnown RBP13.84□□□□□ -0.19
SEC23IP-208ENST00000543134 CECR2Q9BXF3 1484 aa13.76□□□□□ -0.21
SEC23IP-208ENST00000543134 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
SEC23IP-208ENST00000543134 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
SEC23IP-208ENST00000543134 DCAF1Q9Y4B6 1507 aa13.68□□□□□ -0.22
SEC23IP-208ENST00000543134 SHROOM4Q9ULL8 1493 aa13.62□□□□□ -0.23
SEC23IP-208ENST00000543134 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
SEC23IP-208ENST00000543134 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
SEC23IP-208ENST00000543134 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
SEC23IP-208ENST00000543134 ADRA2BP18089 450 aa13.48□□□□□ -0.25
SEC23IP-208ENST00000543134 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
SEC23IP-208ENST00000543134 CUX2O14529 1486 aa13.36□□□□□ -0.27
SEC23IP-208ENST00000543134 SCRIBQ14160 1630 aa13.33□□□□□ -0.27
SEC23IP-208ENST00000543134 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
SEC23IP-208ENST00000543134 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
SEC23IP-208ENST00000543134 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
SEC23IP-208ENST00000543134 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
SEC23IP-208ENST00000543134 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
SEC23IP-208ENST00000543134 NESP48681 1621 aa12.85□□□□□ -0.35
SEC23IP-208ENST00000543134 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
SEC23IP-208ENST00000543134 SUPT5HO00267 1087 aaKnown RBP12.81□□□□□ -0.36
SEC23IP-208ENST00000543134 SMARCA2P51531 1590 aa12.79□□□□□ -0.36
SEC23IP-208ENST00000543134 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
SEC23IP-208ENST00000543134 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
SEC23IP-208ENST00000543134 RSF1Q96T23 1441 aaPredicted RBP12.77□□□□□ -0.37
SEC23IP-208ENST00000543134 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
SEC23IP-208ENST00000543134 PDS5BQ9NTI5 1447 aa12.72□□□□□ -0.37
SEC23IP-208ENST00000543134 MSH5O43196 834 aa12.72□□□□□ -0.37
SEC23IP-208ENST00000543134 MROH2BQ7Z745 1585 aa12.71□□□□□ -0.37
SEC23IP-208ENST00000543134 BAZ1AQ9NRL2 1556 aaPredicted RBP12.71□□□□□ -0.37
SEC23IP-208ENST00000543134 KIF21AQ7Z4S6 1674 aa12.71□□□□□ -0.37
SEC23IP-208ENST00000543134 BAZ1BQ9UIG0 1483 aaKnown RBP12.69□□□□□ -0.38
SEC23IP-208ENST00000543134 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
SEC23IP-208ENST00000543134 SMARCA4P51532 1647 aa12.67□□□□□ -0.38
SEC23IP-208ENST00000543134 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
SEC23IP-208ENST00000543134 WIZO95785 1651 aa12.62□□□□□ -0.39
SEC23IP-208ENST00000543134 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
SEC23IP-208ENST00000543134 KCNA4P22459 653 aa12.6□□□□□ -0.39
SEC23IP-208ENST00000543134 WDR62O43379 1518 aa12.57□□□□□ -0.4
SEC23IP-208ENST00000543134 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
SEC23IP-208ENST00000543134 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.41
SEC23IP-208ENST00000543134 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.41
SEC23IP-208ENST00000543134 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.41
SEC23IP-208ENST00000543134 TRHP20396 242 aaPredicted RBP12.52□□□□□ -0.41
SEC23IP-208ENST00000543134 CADPSQ9ULU8 1353 aa12.5□□□□□ -0.41
SEC23IP-208ENST00000543134 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
SEC23IP-208ENST00000543134 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
SEC23IP-208ENST00000543134 RTN4Q9NQC3 1192 aaKnown RBP12.46□□□□□ -0.41
SEC23IP-208ENST00000543134 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
SEC23IP-208ENST00000543134 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
SEC23IP-208ENST00000543134 NCBP3Q53F19 620 aaKnown RBP12.4□□□□□ -0.42
SEC23IP-208ENST00000543134 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
SEC23IP-208ENST00000543134 SCAF1Q9H7N4 1312 aaKnown RBP12.39□□□□□ -0.43
SEC23IP-208ENST00000543134 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
SEC23IP-208ENST00000543134 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
SEC23IP-208ENST00000543134 CCDC88BA6NC98 1476 aa12.36□□□□□ -0.43
SEC23IP-208ENST00000543134 URB2Q14146 1524 aaKnown RBP12.26□□□□□ -0.45
SEC23IP-208ENST00000543134 CNKSR2Q8WXI2 1034 aa12.25□□□□□ -0.45
SEC23IP-208ENST00000543134 ARAP1Q96P48 1450 aa12.24□□□□□ -0.45
SEC23IP-208ENST00000543134 CFTRP13569 1480 aa12.22□□□□□ -0.45
SEC23IP-208ENST00000543134 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
SEC23IP-208ENST00000543134 NPM3O75607 178 aaKnown RBP12.2□□□□□ -0.46
SEC23IP-208ENST00000543134 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
SEC23IP-208ENST00000543134 FBLN2P98095 1184 aa12.18□□□□□ -0.46
SEC23IP-208ENST00000543134 CHD1O14646 1710 aa12.17□□□□□ -0.46
SEC23IP-208ENST00000543134 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
SEC23IP-208ENST00000543134 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
SEC23IP-208ENST00000543134 PRDM2Q13029 1718 aa12.12□□□□□ -0.47
SEC23IP-208ENST00000543134 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
SEC23IP-208ENST00000543134 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
SEC23IP-208ENST00000543134 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
SEC23IP-208ENST00000543134 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEC23IP-208ENST00000543134 ILDR1Q86SU0 546 aaPredicted RBP12.02□□□□□ -0.48
SEC23IP-208ENST00000543134 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
SEC23IP-208ENST00000543134 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
SEC23IP-208ENST00000543134 DNMBPQ6XZF7 1577 aa11.99□□□□□ -0.49
SEC23IP-208ENST00000543134 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
SEC23IP-208ENST00000543134 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
SEC23IP-208ENST00000543134 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
SEC23IP-208ENST00000543134 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
SEC23IP-208ENST00000543134 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
SEC23IP-208ENST00000543134 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
SEC23IP-208ENST00000543134 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
SEC23IP-208ENST00000543134 GAPVD1Q14C86 1478 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms