RNA–Protein interactions for RNA: ENST00000515539.5

COMMD10-206, Transcript of COMM domain containing 10, humanhuman

TSL 3 BASIC

Gene COMMD10, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD10-206ENST00000515539 AEBP2Q6ZN18 517 aaPredicted RBP24.48■■□□□ 1.51
COMMD10-206ENST00000515539 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
COMMD10-206ENST00000515539 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
COMMD10-206ENST00000515539 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
COMMD10-206ENST00000515539 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
COMMD10-206ENST00000515539 FOXD1Q16676 465 aa19.84■□□□□ 0.77
COMMD10-206ENST00000515539 MSH5O43196 834 aa19.14■□□□□ 0.65
COMMD10-206ENST00000515539 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
COMMD10-206ENST00000515539 PLPPR3Q6T4P5 718 aa17.74■□□□□ 0.43
COMMD10-206ENST00000515539 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
COMMD10-206ENST00000515539 ADRA2BP18089 450 aa17.54■□□□□ 0.4
COMMD10-206ENST00000515539 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
COMMD10-206ENST00000515539 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
COMMD10-206ENST00000515539 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
COMMD10-206ENST00000515539 POTEHQ6S545 545 aa16.28■□□□□ 0.2
COMMD10-206ENST00000515539 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
COMMD10-206ENST00000515539 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
COMMD10-206ENST00000515539 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
COMMD10-206ENST00000515539 DCAF8L1A6NGE4 600 aa15.83■□□□□ 0.12
COMMD10-206ENST00000515539 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.08
COMMD10-206ENST00000515539 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
COMMD10-206ENST00000515539 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
COMMD10-206ENST00000515539 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
COMMD10-206ENST00000515539 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
COMMD10-206ENST00000515539 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.04
COMMD10-206ENST00000515539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.051e-7■□□□□ 9.9
COMMD10-206ENST00000515539 DSG3P32926 999 aa14.67□□□□□ -0.06
COMMD10-206ENST00000515539 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
COMMD10-206ENST00000515539 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
COMMD10-206ENST00000515539 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
COMMD10-206ENST00000515539 CAPN15O75808 1086 aa14.36□□□□□ -0.11
COMMD10-206ENST00000515539 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
COMMD10-206ENST00000515539 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
COMMD10-206ENST00000515539 KCNA4P22459 653 aa14.2□□□□□ -0.14
COMMD10-206ENST00000515539 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
COMMD10-206ENST00000515539 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
COMMD10-206ENST00000515539 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
COMMD10-206ENST00000515539 PLSCR2Q9NRY7 297 aa13.97□□□□□ -0.17
COMMD10-206ENST00000515539 ABCB7O75027 752 aa13.96□□□□□ -0.17
COMMD10-206ENST00000515539 APLP2Q06481 763 aa13.93□□□□□ -0.18
COMMD10-206ENST00000515539 ZNF219Q9P2Y4 722 aaPredicted RBP13.91□□□□□ -0.18
COMMD10-206ENST00000515539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
COMMD10-206ENST00000515539 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
COMMD10-206ENST00000515539 HAX1O00165 279 aa13.76□□□□□ -0.21
COMMD10-206ENST00000515539 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
COMMD10-206ENST00000515539 PIP4P2Q8N4L2 257 aa13.65□□□□□ -0.22
COMMD10-206ENST00000515539 LHX8Q68G74 356 aa13.64□□□□□ -0.23
COMMD10-206ENST00000515539 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
COMMD10-206ENST00000515539 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
COMMD10-206ENST00000515539 EVX2Q03828 476 aa13.51□□□□□ -0.25
COMMD10-206ENST00000515539 POLA2Q14181 598 aa13.51□□□□□ -0.25
COMMD10-206ENST00000515539 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
COMMD10-206ENST00000515539 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
COMMD10-206ENST00000515539 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
COMMD10-206ENST00000515539 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
COMMD10-206ENST00000515539 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
COMMD10-206ENST00000515539 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
COMMD10-206ENST00000515539 PITPNM1O00562 1244 aa13.15□□□□□ -0.3
COMMD10-206ENST00000515539 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
COMMD10-206ENST00000515539 GABBR2O75899 941 aa13.13□□□□□ -0.31
COMMD10-206ENST00000515539 ZBTB22O15209 634 aa13.05□□□□□ -0.32
COMMD10-206ENST00000515539 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
COMMD10-206ENST00000515539 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
COMMD10-206ENST00000515539 POTEMA6NI47 508 aa12.93□□□□□ -0.34
COMMD10-206ENST00000515539 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
COMMD10-206ENST00000515539 POTEIP0CG38 1075 aa12.86□□□□□ -0.35
COMMD10-206ENST00000515539 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
COMMD10-206ENST00000515539 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
COMMD10-206ENST00000515539 ATXN8OSP0DMR3 200 aa12.8□□□□□ -0.36
COMMD10-206ENST00000515539 PRKAR2AP13861 404 aaKnown RBP12.78□□□□□ -0.36
COMMD10-206ENST00000515539 FBLN2P98095 1184 aa12.78□□□□□ -0.36
COMMD10-206ENST00000515539 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
COMMD10-206ENST00000515539 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
COMMD10-206ENST00000515539 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
COMMD10-206ENST00000515539 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
COMMD10-206ENST00000515539 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
COMMD10-206ENST00000515539 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
COMMD10-206ENST00000515539 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
COMMD10-206ENST00000515539 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
COMMD10-206ENST00000515539 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
COMMD10-206ENST00000515539 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
COMMD10-206ENST00000515539 CLCN6P51797 869 aa12.44□□□□□ -0.42
COMMD10-206ENST00000515539 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
COMMD10-206ENST00000515539 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
COMMD10-206ENST00000515539 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
COMMD10-206ENST00000515539 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
COMMD10-206ENST00000515539 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
COMMD10-206ENST00000515539 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
COMMD10-206ENST00000515539 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
COMMD10-206ENST00000515539 FAM163AQ96GL9 167 aaPredicted RBP12.09□□□□□ -0.47
COMMD10-206ENST00000515539 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
COMMD10-206ENST00000515539 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
COMMD10-206ENST00000515539 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
COMMD10-206ENST00000515539 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
COMMD10-206ENST00000515539 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
COMMD10-206ENST00000515539 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
COMMD10-206ENST00000515539 MAMSTRQ6ZN01 415 aa11.96□□□□□ -0.49
COMMD10-206ENST00000515539 STAG3Q9UJ98 1225 aa11.94□□□□□ -0.5
COMMD10-206ENST00000515539 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
COMMD10-206ENST00000515539 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms