RNA–Protein interactions for RNA: ENST00000380377.8

TBCA-202, Transcript of tubulin folding cofactor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCA, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCA-202ENST00000380377 AEBP2Q6ZN18 517 aaPredicted RBP35.91■■■■□ 3.34
TBCA-202ENST00000380377 CHIC1Q5VXU3 224 aa34.33■■■■□ 3.09
TBCA-202ENST00000380377 SENP3Q9H4L4 574 aaPredicted RBP30.52■■■□□ 2.48
TBCA-202ENST00000380377 PHF23Q9BUL5 403 aaPredicted RBP30.18■■■□□ 2.42
TBCA-202ENST00000380377 FOXD1Q16676 465 aa28.45■■■□□ 2.14
TBCA-202ENST00000380377 NISCHQ9Y2I1 1504 aa27.7■■■□□ 2.02
TBCA-202ENST00000380377 PLPPR3Q6T4P5 718 aa27.52■■■□□ 2
TBCA-202ENST00000380377 PPP6R1Q9UPN7 881 aa26.84■■□□□ 1.89
TBCA-202ENST00000380377 ADRA2BP18089 450 aa26.73■■□□□ 1.87
TBCA-202ENST00000380377 PIAS4Q8N2W9 510 aaPredicted RBP26.61■■□□□ 1.85
TBCA-202ENST00000380377 MSH5O43196 834 aa26.48■■□□□ 1.83
TBCA-202ENST00000380377 POTEDQ86YR6 584 aa25.42■■□□□ 1.66
TBCA-202ENST00000380377 CCDC180Q9P1Z9 1646 aa24.69■■□□□ 1.54
TBCA-202ENST00000380377 MAPK8IP2Q13387 824 aaPredicted RBP24.49■■□□□ 1.51
TBCA-202ENST00000380377 SCAF1Q9H7N4 1312 aaKnown RBP24.39■■□□□ 1.5
TBCA-202ENST00000380377 ABCC9O60706 1549 aa24.32■■□□□ 1.48
TBCA-202ENST00000380377 DMRT2Q9Y5R5 561 aa24.27■■□□□ 1.48
TBCA-202ENST00000380377 PPP4R3CPQ6ZMV5 832 aa24.18■■□□□ 1.46
TBCA-202ENST00000380377 CNKSR2Q8WXI2 1034 aa23.65■■□□□ 1.38
TBCA-202ENST00000380377 HOXD11P31277 338 aaPredicted RBP23.5■■□□□ 1.35
TBCA-202ENST00000380377 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
TBCA-202ENST00000380377 RNF216Q9NWF9 866 aaPredicted RBP23.38■■□□□ 1.33
TBCA-202ENST00000380377 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
TBCA-202ENST00000380377 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
TBCA-202ENST00000380377 NACADO15069 1562 aa23.19■■□□□ 1.3
TBCA-202ENST00000380377 DCAF8L1A6NGE4 600 aa23.17■■□□□ 1.3
TBCA-202ENST00000380377 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
TBCA-202ENST00000380377 NPM3O75607 178 aaKnown RBP23.01■■□□□ 1.27
TBCA-202ENST00000380377 MYO15BQ96JP2 1530 aa22.91■■□□□ 1.26
TBCA-202ENST00000380377 UNC13AQ9UPW8 1703 aa22.85■■□□□ 1.25
TBCA-202ENST00000380377 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
TBCA-202ENST00000380377 KCNA4P22459 653 aa22.81■■□□□ 1.24
TBCA-202ENST00000380377 PABPN1Q86U42 306 aaKnown RBP eCLIP22.72■■□□□ 1.23
TBCA-202ENST00000380377 RNF39Q9H2S5 420 aa22.66■■□□□ 1.22
TBCA-202ENST00000380377 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
TBCA-202ENST00000380377 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
TBCA-202ENST00000380377 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
TBCA-202ENST00000380377 CACNB1Q02641 598 aaPredicted RBP22.53■■□□□ 1.2
TBCA-202ENST00000380377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.32■■□□□ 1.164e-8■■■□□ 17.8
TBCA-202ENST00000380377 C1QBPQ07021 282 aaKnown RBP22.31■■□□□ 1.16
TBCA-202ENST00000380377 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
TBCA-202ENST00000380377 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
TBCA-202ENST00000380377 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
TBCA-202ENST00000380377 U3KPZ7 1027 aaPredicted RBP21.95■■□□□ 1.1
TBCA-202ENST00000380377 SLC4A2P04920 1241 aa21.93■■□□□ 1.1
TBCA-202ENST00000380377 CECR2Q9BXF3 1484 aa21.81■■□□□ 1.08
TBCA-202ENST00000380377 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
TBCA-202ENST00000380377 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
TBCA-202ENST00000380377 SPINK5Q9NQ38 1064 aaPredicted RBP21.55■■□□□ 1.04
TBCA-202ENST00000380377 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
TBCA-202ENST00000380377 CAPN15O75808 1086 aa21.43■■□□□ 1.02
TBCA-202ENST00000380377 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
TBCA-202ENST00000380377 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
TBCA-202ENST00000380377 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
TBCA-202ENST00000380377 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
TBCA-202ENST00000380377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.34■■□□□ 1.01
TBCA-202ENST00000380377 HNRNPUL2Q1KMD3 747 aaKnown RBP21.34■■□□□ 1.01
TBCA-202ENST00000380377 DSG3P32926 999 aa21.31■■□□□ 1
TBCA-202ENST00000380377 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
TBCA-202ENST00000380377 HMGXB3Q12766 1538 aa21.29■■□□□ 1
TBCA-202ENST00000380377 APLP2Q06481 763 aa21.27■■□□□ 1
TBCA-202ENST00000380377 SAMD1Q6SPF0 538 aaPredicted RBP21.26■□□□□ 0.99
TBCA-202ENST00000380377 MYCNP04198 464 aaPredicted RBP21.25■□□□□ 0.99
TBCA-202ENST00000380377 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
TBCA-202ENST00000380377 WIZO95785 1651 aa21.23■□□□□ 0.99
TBCA-202ENST00000380377 FOXD4L1Q9NU39 408 aa21.18■□□□□ 0.98
TBCA-202ENST00000380377 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
TBCA-202ENST00000380377 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
TBCA-202ENST00000380377 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
TBCA-202ENST00000380377 ZBTB22O15209 634 aa21.02■□□□□ 0.96
TBCA-202ENST00000380377 NESP48681 1621 aa21■□□□□ 0.95
TBCA-202ENST00000380377 ABCB7O75027 752 aa20.99■□□□□ 0.95
TBCA-202ENST00000380377 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
TBCA-202ENST00000380377 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
TBCA-202ENST00000380377 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
TBCA-202ENST00000380377 KIF21AQ7Z4S6 1674 aa20.81■□□□□ 0.92
TBCA-202ENST00000380377 ATF5Q9Y2D1 282 aaPredicted RBP20.79■□□□□ 0.92
TBCA-202ENST00000380377 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
TBCA-202ENST00000380377 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
TBCA-202ENST00000380377 POLA2Q14181 598 aa20.68■□□□□ 0.9
TBCA-202ENST00000380377 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
TBCA-202ENST00000380377 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
TBCA-202ENST00000380377 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
TBCA-202ENST00000380377 CUX2O14529 1486 aa20.66■□□□□ 0.9
TBCA-202ENST00000380377 CFTRP13569 1480 aa20.62■□□□□ 0.89
TBCA-202ENST00000380377 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
TBCA-202ENST00000380377 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
TBCA-202ENST00000380377 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
TBCA-202ENST00000380377 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
TBCA-202ENST00000380377 ATXN8OSP0DMR3 200 aa20.5■□□□□ 0.87
TBCA-202ENST00000380377 WDR62O43379 1518 aa20.46■□□□□ 0.87
TBCA-202ENST00000380377 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
TBCA-202ENST00000380377 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
TBCA-202ENST00000380377 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
TBCA-202ENST00000380377 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
TBCA-202ENST00000380377 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
TBCA-202ENST00000380377 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
TBCA-202ENST00000380377 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
TBCA-202ENST00000380377 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
TBCA-202ENST00000380377 DNAJC5Q9H3Z4 198 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms