RNA–Protein interactions for RNA: ENST00000507356.5

COMMD10-204, Transcript of COMM domain containing 10, humanhuman

TSL 3

Gene COMMD10, Length 870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD10-204ENST00000507356 NISCHQ9Y2I1 1504 aa29.58■■■□□ 2.33
COMMD10-204ENST00000507356 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
COMMD10-204ENST00000507356 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
COMMD10-204ENST00000507356 ABCC9O60706 1549 aa25.78■■□□□ 1.72
COMMD10-204ENST00000507356 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
COMMD10-204ENST00000507356 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
COMMD10-204ENST00000507356 NACADO15069 1562 aa24.67■■□□□ 1.54
COMMD10-204ENST00000507356 ZCCHC6Q5VYS8 1495 aaKnown RBP24.66■■□□□ 1.54
COMMD10-204ENST00000507356 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
COMMD10-204ENST00000507356 MYO15BQ96JP2 1530 aa24.49■■□□□ 1.51
COMMD10-204ENST00000507356 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
COMMD10-204ENST00000507356 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
COMMD10-204ENST00000507356 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
COMMD10-204ENST00000507356 SCRIBQ14160 1630 aa24.09■■□□□ 1.45
COMMD10-204ENST00000507356 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
COMMD10-204ENST00000507356 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
COMMD10-204ENST00000507356 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
COMMD10-204ENST00000507356 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
COMMD10-204ENST00000507356 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
COMMD10-204ENST00000507356 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
COMMD10-204ENST00000507356 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
COMMD10-204ENST00000507356 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
COMMD10-204ENST00000507356 SMARCA4P51532 1647 aa23■■□□□ 1.27
COMMD10-204ENST00000507356 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
COMMD10-204ENST00000507356 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
COMMD10-204ENST00000507356 ATAD2BQ9ULI0 1458 aa22.82■■□□□ 1.24
COMMD10-204ENST00000507356 NCAPD3P42695 1498 aa22.76■■□□□ 1.23
COMMD10-204ENST00000507356 SMARCA2P51531 1590 aa22.76■■□□□ 1.23
COMMD10-204ENST00000507356 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
COMMD10-204ENST00000507356 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
COMMD10-204ENST00000507356 WIZO95785 1651 aa22.66■■□□□ 1.22
COMMD10-204ENST00000507356 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
COMMD10-204ENST00000507356 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
COMMD10-204ENST00000507356 NESP48681 1621 aa22.35■■□□□ 1.17
COMMD10-204ENST00000507356 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
COMMD10-204ENST00000507356 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
COMMD10-204ENST00000507356 POTEDQ86YR6 584 aa22.18■■□□□ 1.14
COMMD10-204ENST00000507356 ERCC6Q03468 1493 aa22.14■■□□□ 1.13
COMMD10-204ENST00000507356 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
COMMD10-204ENST00000507356 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
COMMD10-204ENST00000507356 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
COMMD10-204ENST00000507356 FOXD1Q16676 465 aa22.03■■□□□ 1.12
COMMD10-204ENST00000507356 THOC2Q8NI27 1593 aaKnown RBP22.01■■□□□ 1.11
COMMD10-204ENST00000507356 CFTRP13569 1480 aa21.99■■□□□ 1.11
COMMD10-204ENST00000507356 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
COMMD10-204ENST00000507356 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
COMMD10-204ENST00000507356 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
COMMD10-204ENST00000507356 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
COMMD10-204ENST00000507356 CUX2O14529 1486 aa21.88■■□□□ 1.09
COMMD10-204ENST00000507356 CEP164Q9UPV0 1460 aa21.84■■□□□ 1.09
COMMD10-204ENST00000507356 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
COMMD10-204ENST00000507356 WDR62O43379 1518 aa21.78■■□□□ 1.08
COMMD10-204ENST00000507356 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
COMMD10-204ENST00000507356 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
COMMD10-204ENST00000507356 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
COMMD10-204ENST00000507356 CUX1P39880 1505 aa21.45■■□□□ 1.02
COMMD10-204ENST00000507356 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
COMMD10-204ENST00000507356 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
COMMD10-204ENST00000507356 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
COMMD10-204ENST00000507356 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
COMMD10-204ENST00000507356 IFT140Q96RY7 1462 aa21.36■■□□□ 1.01
COMMD10-204ENST00000507356 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
COMMD10-204ENST00000507356 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
COMMD10-204ENST00000507356 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
COMMD10-204ENST00000507356 SYNJ1O43426 1573 aa21.29■■□□□ 1
COMMD10-204ENST00000507356 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
COMMD10-204ENST00000507356 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
COMMD10-204ENST00000507356 SOGA1O94964 1423 aa21.23■□□□□ 0.99
COMMD10-204ENST00000507356 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
COMMD10-204ENST00000507356 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
COMMD10-204ENST00000507356 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.98
COMMD10-204ENST00000507356 DNAJC5Q9H3Z4 198 aa21.18■□□□□ 0.98
COMMD10-204ENST00000507356 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
COMMD10-204ENST00000507356 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
COMMD10-204ENST00000507356 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
COMMD10-204ENST00000507356 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.97
COMMD10-204ENST00000507356 CHD1O14646 1710 aa21.08■□□□□ 0.97
COMMD10-204ENST00000507356 MSH5O43196 834 aa21.03■□□□□ 0.96
COMMD10-204ENST00000507356 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
COMMD10-204ENST00000507356 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
COMMD10-204ENST00000507356 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
COMMD10-204ENST00000507356 MAGI1Q96QZ7 1491 aaPredicted RBP20.93■□□□□ 0.94
COMMD10-204ENST00000507356 OSCARQ8IYS5 282 aa20.92■□□□□ 0.94
COMMD10-204ENST00000507356 FBLN2P98095 1184 aa20.88■□□□□ 0.93
COMMD10-204ENST00000507356 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
COMMD10-204ENST00000507356 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
COMMD10-204ENST00000507356 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.92
COMMD10-204ENST00000507356 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
COMMD10-204ENST00000507356 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
COMMD10-204ENST00000507356 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
COMMD10-204ENST00000507356 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
COMMD10-204ENST00000507356 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
COMMD10-204ENST00000507356 GRIN2AQ12879 1464 aa20.75■□□□□ 0.91
COMMD10-204ENST00000507356 FHAD1B1AJZ9 1412 aa20.74■□□□□ 0.91
COMMD10-204ENST00000507356 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
COMMD10-204ENST00000507356 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
COMMD10-204ENST00000507356 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
COMMD10-204ENST00000507356 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
COMMD10-204ENST00000507356 IGF1RP08069 1367 aa20.68■□□□□ 0.9
COMMD10-204ENST00000507356 CUL7Q14999 1698 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms