Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 PXA2YKL188C 2562 nt4□□□□□ -1.77
SPB4P25808 FLO9YAL063C 3969 nt4□□□□□ -1.77
SPB4P25808 PFF1YBR074W 2931 nt4□□□□□ -1.77
SPB4P25808 SPA2YLL021W 4401 nt4□□□□□ -1.77
SPB4P25808 KAP123YER110C 3342 nt4□□□□□ -1.77
SPB4P25808 SSM4YIL030C 3960 nt3.99□□□□□ -1.77
SPB4P25808 SMY1YKL079W 1971 nt3.99□□□□□ -1.77
SPB4P25808 TFC1YBR123C 1950 nt3.99□□□□□ -1.77
SPB4P25808 AKR1YDR264C 2295 nt3.98□□□□□ -1.77
SPB4P25808 TUS1YLR425W 3924 nt3.98□□□□□ -1.77
SPB4P25808 HEH2YDR458C 1992 nt3.98□□□□□ -1.77
SPB4P25808 SSQ1YLR369W 1974 nt3.98□□□□□ -1.77
SPB4P25808 HEF3YNL014W 3135 nt3.97□□□□□ -1.77
SPB4P25808 RIC1YLR039C 3171 nt3.97□□□□□ -1.77
SPB4P25808 SQS1YNL224C 2304 nt3.97□□□□□ -1.77
SPB4P25808 tV(CAC)DtV(CAC)D 73 nt3.97□□□□□ -1.77
SPB4P25808 tV(CAC)HtV(CAC)H 73 nt3.97□□□□□ -1.77
SPB4P25808 YLR154C-HYLR154C-H 132 nt3.97□□□□□ -1.77
SPB4P25808 YLR156C-AYLR156C-A 132 nt3.97□□□□□ -1.77
SPB4P25808 YLR157C-CYLR157C-C 132 nt3.97□□□□□ -1.77
SPB4P25808 YLR159C-AYLR159C-A 132 nt3.97□□□□□ -1.77
SPB4P25808 YOR073W-AYOR073W-A 234 nt3.97□□□□□ -1.77
SPB4P25808 NIP100YPL174C 2607 nt3.97□□□□□ -1.77
SPB4P25808 MPT5YGL178W 2580 nt3.97□□□□□ -1.77
SPB4P25808 RPO41YFL036W 4056 nt3.96□□□□□ -1.78
SPB4P25808 SNU13YEL026W 381 nt3.96□□□□□ -1.78
SPB4P25808 GRR1YJR090C 3456 nt3.96□□□□□ -1.78
SPB4P25808 PEP3YLR148W 2757 nt3.96□□□□□ -1.78
SPB4P25808 RTT10YPL183C 3042 nt3.95□□□□□ -1.78
SPB4P25808 SDC25YLL016W 3147 nt3.95□□□□□ -1.78
SPB4P25808 MET5YJR137C 4329 nt3.95□□□□□ -1.78
SPB4P25808 YFR016CYFR016C 3702 nt3.95□□□□□ -1.78
SPB4P25808 SUL1YBR294W 2580 nt3.94□□□□□ -1.78
SPB4P25808 RPS12YOR369C 432 nt3.94□□□□□ -1.78
SPB4P25808 RPH1YER169W 2391 nt3.94□□□□□ -1.78
SPB4P25808 COS111YBR203W 2775 nt3.93□□□□□ -1.78
SPB4P25808 RPA135YPR010C 3612 nt3.93□□□□□ -1.78
SPB4P25808 CRS5YOR031W 210 nt3.93□□□□□ -1.78
SPB4P25808 SWI6YLR182W 2412 nt3.92□□□□□ -1.78
SPB4P25808 FAP7YDL166C 594 nt3.92□□□□□ -1.78
SPB4P25808 ECM12YHR021W-A 456 nt3.92□□□□□ -1.78
SPB4P25808 YMR122W-AYMR122W-A 255 nt3.92□□□□□ -1.78
SPB4P25808 DAN4YJR151C 3486 nt3.92□□□□□ -1.78
SPB4P25808 MTR4YJL050W 3222 nt3.91□□□□□ -1.78
SPB4P25808 YFL065CYFL065C 309 nt3.91□□□□□ -1.78
SPB4P25808 ULI1YFR026C 510 nt3.91□□□□□ -1.78
SPB4P25808 YNL114CYNL114C 372 nt3.91□□□□□ -1.78
SPB4P25808 YOR218CYOR218C 420 nt3.91□□□□□ -1.78
SPB4P25808 YBR131C-AYBR131C-A 90 nt3.91□□□□□ -1.78
SPB4P25808 URA2YJL130C 6645 nt3.91□□□□□ -1.78
SPB4P25808 DBP7YKR024C 2229 nt3.91□□□□□ -1.78
SPB4P25808 SMC3YJL074C 3693 nt3.91□□□□□ -1.78
SPB4P25808 SCH9YHR205W 2475 nt3.9□□□□□ -1.78
SPB4P25808 TFC4YGR047C 3078 nt3.9□□□□□ -1.78
SPB4P25808 RRP5YMR229C 5190 nt3.9□□□□□ -1.79
SPB4P25808 SIN3YOL004W 4611 nt3.9□□□□□ -1.79
SPB4P25808 SPO22YIL073C 2928 nt3.9□□□□□ -1.79
SPB4P25808 PKH1YDR490C 2301 nt3.89□□□□□ -1.79
SPB4P25808 RRM3YHR031C 2172 nt3.89□□□□□ -1.79
SPB4P25808 RPL20AYMR242C 519 nt3.89□□□□□ -1.79
SPB4P25808 GIS2YNL255C 462 nt3.89□□□□□ -1.79
SPB4P25808 snR52snR52 92 nt3.89□□□□□ -1.79
SPB4P25808 CRM1YGR218W 3255 nt3.89□□□□□ -1.79
SPB4P25808 PTP3YER075C 2787 nt3.88□□□□□ -1.79
SPB4P25808 ROM1YGR070W 3468 nt3.88□□□□□ -1.79
SPB4P25808 VPS16YPL045W 2397 nt3.88□□□□□ -1.79
SPB4P25808 SWA2YDR320C 2007 nt3.87□□□□□ -1.79
SPB4P25808 RPL23BYER117W 414 nt3.87□□□□□ -1.79
SPB4P25808 YBL053WYBL053W 375 nt3.87□□□□□ -1.79
SPB4P25808 RFX1YLR176C 2436 nt3.87□□□□□ -1.79
SPB4P25808 ORC2YBR060C 1863 nt3.87□□□□□ -1.79
SPB4P25808 SSN2YDR443C 4263 nt3.87□□□□□ -1.79
SPB4P25808 RPO21YDL140C 5202 nt3.87□□□□□ -1.79
SPB4P25808 DUG2YBR281C 2637 nt3.87□□□□□ -1.79
SPB4P25808 SLY1YDR189W 2001 nt3.87□□□□□ -1.79
SPB4P25808 CLN3YAL040C 1743 nt3.87□□□□□ -1.79
SPB4P25808 AFI1YOR129C 2682 nt3.87□□□□□ -1.79
SPB4P25808 YEL025CYEL025C 3567 nt3.86□□□□□ -1.79
SPB4P25808 SPO75YLL005C 2607 nt3.86□□□□□ -1.79
SPB4P25808 SNF5YBR289W 2718 nt3.86□□□□□ -1.79
SPB4P25808 YDR003W-AYDR003W-A 123 nt3.86□□□□□ -1.79
SPB4P25808 tK(UUU)DtK(UUU)D 73 nt3.86□□□□□ -1.79
SPB4P25808 tK(UUU)G1tK(UUU)G1 73 nt3.86□□□□□ -1.79
SPB4P25808 tK(UUU)G2tK(UUU)G2 73 nt3.86□□□□□ -1.79
SPB4P25808 tK(UUU)KtK(UUU)K 73 nt3.86□□□□□ -1.79
SPB4P25808 tK(UUU)LtK(UUU)L 73 nt3.86□□□□□ -1.79
SPB4P25808 tK(UUU)OtK(UUU)O 73 nt3.86□□□□□ -1.79
SPB4P25808 tK(UUU)PtK(UUU)P 73 nt3.86□□□□□ -1.79
SPB4P25808 GCV2YMR189W 3105 nt3.86□□□□□ -1.79
SPB4P25808 STB4YMR019W 2850 nt3.86□□□□□ -1.79
SPB4P25808 FIR1YER032W 2631 nt3.85□□□□□ -1.79
SPB4P25808 TAE2YPL009C 3117 nt3.85□□□□□ -1.79
SPB4P25808 POL2YNL262W 6669 nt3.85□□□□□ -1.79
SPB4P25808 PRP42YDR235W 1635 nt3.84□□□□□ -1.79
SPB4P25808 ZRG8YER033C 3231 nt3.84□□□□□ -1.79
SPB4P25808 INP53YOR109W 3324 nt3.84□□□□□ -1.79
SPB4P25808 YEL073CYEL073C 324 nt3.84□□□□□ -1.79
SPB4P25808 ACB1YGR037C 264 nt3.84□□□□□ -1.79
SPB4P25808 SKP2YNL311C 2292 nt3.84□□□□□ -1.79
SPB4P25808 RPS8AYBL072C 603 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms