RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W DRS1P32892 752 aaKnown RBP5.89□□□□□ -1.47
VPS16YPL045W MTC1P47018 478 aaKnown RBP5.47□□□□□ -1.53
VPS16YPL045W BFR2Q06631 534 aaKnown RBP5.26□□□□□ -1.57
VPS16YPL045W TFA1P36100 482 aa5.23□□□□□ -1.57
VPS16YPL045W FAP1P53971 965 aa5.1□□□□□ -1.59
VPS16YPL045W AVT3P36062 692 aa4.94□□□□□ -1.62
VPS16YPL045W DIP2Q12220 943 aaPredicted RBP4.89□□□□□ -1.63
VPS16YPL045W PRY3P47033 881 aa4.84□□□□□ -1.63
VPS16YPL045W RQC2Q12532 1038 aaKnown RBP4.8□□□□□ -1.64
VPS16YPL045W YCK3P39962 524 aa4.52□□□□□ -1.69
VPS16YPL045W HAA1Q12753 694 aaKnown RBP4.51□□□□□ -1.69
VPS16YPL045W RSE1Q04693 1361 aaKnown RBP4.48□□□□□ -1.69
VPS16YPL045W DMA1P38823 416 aa4.47□□□□□ -1.69
VPS16YPL045W TAF7Q05021 590 aa4.45□□□□□ -1.7
VPS16YPL045W AAD16Q02895 342 aa4.36□□□□□ -1.71
VPS16YPL045W ISW2Q08773 1120 aa4.35□□□□□ -1.71
VPS16YPL045W PTP3P40048 928 aa4.32□□□□□ -1.72
VPS16YPL045W RPG1P38249 964 aaKnown RBP4.29□□□□□ -1.72
VPS16YPL045W RPL17AP05740 184 aaKnown RBP4.29□□□□□ -1.72
VPS16YPL045W RPL17BP46990 184 aaKnown RBP4.29□□□□□ -1.72
VPS16YPL045W LEO1P38439 464 aa4.27□□□□□ -1.73
VPS16YPL045W PRI1P10363 409 aa4.23□□□□□ -1.73
VPS16YPL045W RIM101P33400 625 aa4.21□□□□□ -1.74
VPS16YPL045W REB1P21538 810 aa4.2□□□□□ -1.74
VPS16YPL045W SSP1P38871 571 aa4.19□□□□□ -1.74
VPS16YPL045W SPT21P35209 758 aa4.19□□□□□ -1.74
VPS16YPL045W BUD31P25337 157 aaPredicted RBP4.13□□□□□ -1.75
VPS16YPL045W SAS10Q12136 610 aaPredicted RBP4.11□□□□□ -1.75
VPS16YPL045W LEU3P08638 886 aa4.1□□□□□ -1.75
VPS16YPL045W OXP1P28273 1286 aa4.1□□□□□ -1.75
VPS16YPL045W YAH1Q12184 172 aaKnown RBP4.08□□□□□ -1.76
VPS16YPL045W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
VPS16YPL045W YLR271WQ06152 274 aa4.06□□□□□ -1.76
VPS16YPL045W YIL055CP40523 627 aaKnown RBP4.02□□□□□ -1.77
VPS16YPL045W MGA2P40578 1113 aa4.01□□□□□ -1.77
VPS16YPL045W TSR3Q12094 313 aaKnown RBP3.99□□□□□ -1.77
VPS16YPL045W YGL015CP33199 130 aa3.97□□□□□ -1.77
VPS16YPL045W YKR023WP36119 530 aaKnown RBP3.97□□□□□ -1.77
VPS16YPL045W DMA2P53924 522 aa3.97□□□□□ -1.77
VPS16YPL045W CST9Q06032 482 aa3.96□□□□□ -1.78
VPS16YPL045W RSM7P47150 247 aa3.96□□□□□ -1.78
VPS16YPL045W RPN1P38764 993 aaKnown RBP3.95□□□□□ -1.78
VPS16YPL045W PSD2P53037 1138 aaKnown RBP3.91□□□□□ -1.78
VPS16YPL045W HOP09932 586 aa3.89□□□□□ -1.79
VPS16YPL045W ABP1P15891 592 aaKnown RBP3.89□□□□□ -1.79
VPS16YPL045W TFC8Q12308 588 aa3.88□□□□□ -1.79
VPS16YPL045W SPB4P25808 606 aaPredicted RBP3.88□□□□□ -1.79
VPS16YPL045W AI2P03876 854 aa3.87□□□□□ -1.79
VPS16YPL045W SET1P38827 1080 aaKnown RBP3.87□□□□□ -1.79
VPS16YPL045W DCD1P06773 312 aa3.86□□□□□ -1.79
VPS16YPL045W RAM2P29703 316 aa3.86□□□□□ -1.79
VPS16YPL045W CKB1P43639 278 aa3.85□□□□□ -1.79
VPS16YPL045W RLF2Q12495 606 aa3.85□□□□□ -1.79
VPS16YPL045W YPR148CQ06523 435 aa3.84□□□□□ -1.79
VPS16YPL045W VPS70P47161 811 aa3.84□□□□□ -1.79
VPS16YPL045W SIS1P25294 352 aaKnown RBP3.83□□□□□ -1.8
VPS16YPL045W MRPL32P25348 183 aa3.81□□□□□ -1.8
VPS16YPL045W BBC1P47068 1157 aa3.81□□□□□ -1.8
VPS16YPL045W RCR1P38212 213 aa3.8□□□□□ -1.8
VPS16YPL045W IFH1P39520 1085 aa3.8□□□□□ -1.8
VPS16YPL045W BCH2P36122 765 aa3.8□□□□□ -1.8
VPS16YPL045W DSF2P38213 736 aa3.79□□□□□ -1.8
VPS16YPL045W CDC27P38042 758 aa3.78□□□□□ -1.8
VPS16YPL045W MRM1P25270 412 aa3.77□□□□□ -1.81
VPS16YPL045W PBS2P08018 668 aa3.77□□□□□ -1.81
VPS16YPL045W KIN1P13185 1064 aa3.76□□□□□ -1.81
VPS16YPL045W MAK11P20484 414 aaKnown RBP3.76□□□□□ -1.81
VPS16YPL045W YNR021WP53723 404 aaKnown RBP3.75□□□□□ -1.81
VPS16YPL045W RTG3P38165 486 aa3.74□□□□□ -1.81
VPS16YPL045W EPS1P40557 701 aa3.74□□□□□ -1.81
VPS16YPL045W GLC3P32775 704 aa3.73□□□□□ -1.81
VPS16YPL045W BDF1P35817 686 aa3.72□□□□□ -1.81
VPS16YPL045W AIM7Q12156 149 aa3.72□□□□□ -1.81
VPS16YPL045W HGH1P48362 394 aaKnown RBP3.71□□□□□ -1.82
VPS16YPL045W MAM3Q12296 706 aa3.71□□□□□ -1.82
VPS16YPL045W DIT2P21595 489 aa3.7□□□□□ -1.82
VPS16YPL045W COQ8P27697 501 aa3.7□□□□□ -1.82
VPS16YPL045W GUA1P38625 525 aaKnown RBP3.7□□□□□ -1.82
VPS16YPL045W NUP42P49686 430 aaKnown RBP3.7□□□□□ -1.82
VPS16YPL045W IES2P40154 320 aa3.69□□□□□ -1.82
VPS16YPL045W VPS29P38759 282 aa3.68□□□□□ -1.82
VPS16YPL045W REF2P42073 533 aaPredicted RBP3.68□□□□□ -1.82
VPS16YPL045W NOP53Q12080 455 aaKnown RBP3.67□□□□□ -1.82
VPS16YPL045W COX6P00427 148 aa3.65□□□□□ -1.83
VPS16YPL045W MIF2P35201 549 aa3.65□□□□□ -1.83
VPS16YPL045W HPC2Q01448 625 aa3.65□□□□□ -1.83
VPS16YPL045W MAK21Q12176 1025 aaKnown RBP3.65□□□□□ -1.83
VPS16YPL045W ATF2P53296 535 aa3.64□□□□□ -1.83
VPS16YPL045W EDS1P38073 919 aa3.63□□□□□ -1.83
VPS16YPL045W SCY1P53009 804 aa3.63□□□□□ -1.83
VPS16YPL045W TFB3Q03290 321 aa3.63□□□□□ -1.83
VPS16YPL045W STS1P38637 319 aa3.62□□□□□ -1.83
VPS16YPL045W YML020WQ03722 664 aa3.62□□□□□ -1.83
VPS16YPL045W YMR1P47147 688 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
VPS16YPL045W SSA1P10591 642 aaKnown RBP3.6□□□□□ -1.83
VPS16YPL045W PKC1P24583 1151 aa3.6□□□□□ -1.83
VPS16YPL045W NOP8Q08287 484 aaPredicted RBP3.6□□□□□ -1.83
VPS16YPL045W BRL1P38770 471 aa3.59□□□□□ -1.83
VPS16YPL045W UBP9P39967 754 aa3.59□□□□□ -1.83
VPS16YPL045W SLX8P40072 274 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms