RNA–Protein interactions for RNA: YBR123C

TFC1, Transcript of Subunit of RNA polymerase III transcription initiation factor complex, yeast

Gene TFC1, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFC1	YBR123C	MTC1	P47018	478 aa	Known RBP	6.32	□□□□□ -1.4
TFC1	YBR123C	FAP1	P53971	965 aa		6.11	□□□□□ -1.43
TFC1	YBR123C	PRY3	P47033	881 aa		5.73	□□□□□ -1.49
TFC1	YBR123C	DRS1	P32892	752 aa	Known RBP	5.69	□□□□□ -1.5
TFC1	YBR123C	RQC2	Q12532	1038 aa	Known RBP	5.64	□□□□□ -1.51
TFC1	YBR123C	AAD16	Q02895	342 aa		5.56	□□□□□ -1.52
TFC1	YBR123C	TFA1	P36100	482 aa		5.53	□□□□□ -1.52
TFC1	YBR123C	PRI1	P10363	409 aa		5.5	□□□□□ -1.53
TFC1	YBR123C	TAF7	Q05021	590 aa		5.43	□□□□□ -1.54
TFC1	YBR123C	HAA1	Q12753	694 aa	Known RBP	5.4	□□□□□ -1.55
TFC1	YBR123C	ISW2	Q08773	1120 aa		5.37	□□□□□ -1.55
TFC1	YBR123C	RPG1	P38249	964 aa	Known RBP	5.28	□□□□□ -1.56
TFC1	YBR123C	YCK3	P39962	524 aa		5.27	□□□□□ -1.57
TFC1	YBR123C	BFR2	Q06631	534 aa	Known RBP	5.24	□□□□□ -1.57
TFC1	YBR123C	TSR3	Q12094	313 aa	Known RBP	5.19	□□□□□ -1.58
TFC1	YBR123C	MRPL32	P25348	183 aa		5.05	□□□□□ -1.6
TFC1	YBR123C	DIP2	Q12220	943 aa	Predicted RBP	5.02	□□□□□ -1.61
TFC1	YBR123C	RSE1	Q04693	1361 aa	Known RBP	4.97	□□□□□ -1.61
TFC1	YBR123C	YGL015C	P33199	130 aa		4.94	□□□□□ -1.62
TFC1	YBR123C	URN1	Q06525	465 aa	Known RBP	4.9	□□□□□ -1.63
TFC1	YBR123C	DMA1	P38823	416 aa		4.89	□□□□□ -1.63
TFC1	YBR123C	REB1	P21538	810 aa		4.86	□□□□□ -1.63
TFC1	YBR123C	LEO1	P38439	464 aa		4.84	□□□□□ -1.64
TFC1	YBR123C	AVT3	P36062	692 aa		4.83	□□□□□ -1.64
TFC1	YBR123C	RPL17A	P05740	184 aa	Known RBP	4.82	□□□□□ -1.64
TFC1	YBR123C	RPL17B	P46990	184 aa	Known RBP	4.82	□□□□□ -1.64
TFC1	YBR123C	IOC4	Q04213	475 aa		4.78	□□□□□ -1.64
TFC1	YBR123C	ABP1	P15891	592 aa	Known RBP	4.67	□□□□□ -1.66
TFC1	YBR123C	NAP1	P25293	417 aa	Known RBP	4.67	□□□□□ -1.66
TFC1	YBR123C	IFH1	P39520	1085 aa		4.65	□□□□□ -1.66
TFC1	YBR123C	CDC27	P38042	758 aa		4.64	□□□□□ -1.67
TFC1	YBR123C	UBP10	P53874	792 aa	Predicted RBP	4.63	□□□□□ -1.67
TFC1	YBR123C	BUD31	P25337	157 aa	Predicted RBP	4.62	□□□□□ -1.67
TFC1	YBR123C	ORC1	P54784	914 aa	Predicted RBP	4.6	□□□□□ -1.67
TFC1	YBR123C	MAP2	P38174	421 aa	Known RBP	4.56	□□□□□ -1.68
TFC1	YBR123C	YKR023W	P36119	530 aa	Known RBP	4.55	□□□□□ -1.68
TFC1	YBR123C	SPT21	P35209	758 aa		4.52	□□□□□ -1.69
TFC1	YBR123C	DMA2	P53924	522 aa		4.49	□□□□□ -1.69
TFC1	YBR123C	LEU3	P08638	886 aa		4.49	□□□□□ -1.69
TFC1	YBR123C	HO	P09932	586 aa		4.49	□□□□□ -1.69
TFC1	YBR123C	TIF4632	P39936	914 aa	Known RBP	4.49	□□□□□ -1.69
TFC1	YBR123C	TFC8	Q12308	588 aa		4.49	□□□□□ -1.69
TFC1	YBR123C	UBP9	P39967	754 aa		4.45	□□□□□ -1.7
TFC1	YBR123C	DCD1	P06773	312 aa		4.44	□□□□□ -1.7
TFC1	YBR123C	SIS1	P25294	352 aa	Known RBP	4.44	□□□□□ -1.7
TFC1	YBR123C	TGL3	P40308	642 aa		4.44	□□□□□ -1.7
TFC1	YBR123C	YFR016C	P43597	1233 aa	Known RBP	4.44	□□□□□ -1.7
TFC1	YBR123C	SCY1	P53009	804 aa		4.44	□□□□□ -1.7
TFC1	YBR123C	SLX5	P32828	619 aa	Known RBP	4.43	□□□□□ -1.7
TFC1	YBR123C	AIM44	Q99299	758 aa		4.42	□□□□□ -1.7
TFC1	YBR123C	SIS2	P36024	562 aa		4.4	□□□□□ -1.71
TFC1	YBR123C	YRB30	P53107	440 aa	Predicted RBP	4.4	□□□□□ -1.71
TFC1	YBR123C	SAS10	Q12136	610 aa	Predicted RBP	4.38	□□□□□ -1.71
TFC1	YBR123C	KRI1	P42846	591 aa	Known RBP	4.38	□□□□□ -1.71
TFC1	YBR123C	SNU71	P53207	620 aa	Known RBP	4.38	□□□□□ -1.71
TFC1	YBR123C	RLF2	Q12495	606 aa		4.34	□□□□□ -1.71
TFC1	YBR123C	RIM101	P33400	625 aa		4.33	□□□□□ -1.72
TFC1	YBR123C	ATG36	P46983	293 aa		4.33	□□□□□ -1.72
TFC1	YBR123C	BCH2	P36122	765 aa		4.32	□□□□□ -1.72
TFC1	YBR123C	TOP1	P04786	769 aa		4.31	□□□□□ -1.72
TFC1	YBR123C	SWE1	P32944	819 aa		4.31	□□□□□ -1.72
TFC1	YBR123C	PTP3	P40048	928 aa		4.3	□□□□□ -1.72
TFC1	YBR123C	MDG1	P53885	366 aa		4.29	□□□□□ -1.72
TFC1	YBR123C	CWC22	P53333	577 aa	Known RBP	4.28	□□□□□ -1.72
TFC1	YBR123C	LAM6	Q08001	693 aa		4.27	□□□□□ -1.73
TFC1	YBR123C	RPN1	P38764	993 aa	Known RBP	4.26	□□□□□ -1.73
TFC1	YBR123C	YML020W	Q03722	664 aa		4.26	□□□□□ -1.73
TFC1	YBR123C	NOP8	Q08287	484 aa	Predicted RBP	4.24	□□□□□ -1.73
TFC1	YBR123C	EBP2	P36049	427 aa	Known RBP	4.22	□□□□□ -1.73
TFC1	YBR123C	TPO2	P53283	614 aa		4.22	□□□□□ -1.73
TFC1	YBR123C	BRL1	P38770	471 aa		4.21	□□□□□ -1.74
TFC1	YBR123C	EPS1	P40557	701 aa		4.2	□□□□□ -1.74
TFC1	YBR123C	YOR238W	Q08634	303 aa		4.2	□□□□□ -1.74
TFC1	YBR123C	YIL055C	P40523	627 aa	Known RBP	4.19	□□□□□ -1.74
TFC1	YBR123C	RPS0B	P46654	252 aa	Known RBP	4.19	□□□□□ -1.74
TFC1	YBR123C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TFC1	YBR123C	BDF1	P35817	686 aa		4.18	□□□□□ -1.74
TFC1	YBR123C	NUG1	P40010	520 aa	Known RBP	4.18	□□□□□ -1.74
TFC1	YBR123C	MST1	P07236	462 aa		4.17	□□□□□ -1.74
TFC1	YBR123C	CKB1	P43639	278 aa		4.17	□□□□□ -1.74
TFC1	YBR123C	GIN4	Q12263	1142 aa		4.17	□□□□□ -1.74
TFC1	YBR123C	RLP24	Q07915	199 aa	Known RBP	4.15	□□□□□ -1.74
TFC1	YBR123C	YBL029C-A	Q3E756	94 aa		4.15	□□□□□ -1.74
TFC1	YBR123C	OXP1	P28273	1286 aa		4.14	□□□□□ -1.75
TFC1	YBR123C	ISW1	P38144	1129 aa		4.14	□□□□□ -1.75
TFC1	YBR123C	BBC1	P47068	1157 aa		4.14	□□□□□ -1.75
TFC1	YBR123C	FAR11	P53917	953 aa		4.14	□□□□□ -1.75
TFC1	YBR123C	SSP1	P38871	571 aa		4.13	□□□□□ -1.75
TFC1	YBR123C	YJR008W	P47085	338 aa		4.13	□□□□□ -1.75
TFC1	YBR123C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
TFC1	YBR123C	SPC42	P36094	363 aa		4.12	□□□□□ -1.75
TFC1	YBR123C	YAP5	P40574	245 aa		4.11	□□□□□ -1.75
TFC1	YBR123C	VNX1	P42839	908 aa		4.11	□□□□□ -1.75
TFC1	YBR123C	BUD21	Q08492	214 aa	Predicted RBP	4.11	□□□□□ -1.75
TFC1	YBR123C	MRX12	P47084	519 aa		4.11	□□□□□ -1.75
TFC1	YBR123C	SPP1	Q03012	353 aa		4.11	□□□□□ -1.75
TFC1	YBR123C	SSF1	P38789	453 aa	Predicted RBP	4.1	□□□□□ -1.75
TFC1	YBR123C	SLX8	P40072	274 aa		4.1	□□□□□ -1.75
TFC1	YBR123C	PAM1	P37304	830 aa	Known RBP	4.09	□□□□□ -1.76
TFC1	YBR123C	RSM7	P47150	247 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms