Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 UNC93B3-201ENST00000308076 687 ntBASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 AC245052.3-201ENST00000450182 901 ntBASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 TSPY26P-201ENST00000476365 1326 ntBASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM56-RWDD3S4R434 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 TNXA-203ENST00000507684 2038 ntBASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 AC116050.2-201ENST00000612102 1779 ntBASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 KRT16P2-201ENST00000414673 1423 ntBASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM56-RWDD3S4R434 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 MIR572-201ENST00000384983 95 ntBASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 AC024257.2-201ENST00000549699 147 ntBASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM56-RWDD3S4R434 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 AL691432.2-201ENST00000607222 2038 ntBASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM56-RWDD3S4R434 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms