Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 HLA-B-256ENST00000639848 1089 ntBASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
SNAP47Q5SQN1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 PNMA6B-201ENST00000538162 1200 ntBASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 AC105020.6-201ENST00000621523 1217 ntBASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 AC073648.6-201ENST00000641589 218 ntBASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNAP47Q5SQN1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNAP47Q5SQN1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 AL391422.3-201ENST00000603791 2761 ntBASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 GCSHP5-201ENST00000443090 522 ntBASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.7■□□□□ 0.74
SNAP47Q5SQN1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms