RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 NISCHQ9Y2I1 1504 aa49.87■■■■■ 5.57
CCDC107-206ENST00000426546 ABCC9O60706 1549 aa44.88■■■■■ 4.78
CCDC107-206ENST00000426546 CCDC180Q9P1Z9 1646 aa44.71■■■■■ 4.75
CCDC107-206ENST00000426546 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
CCDC107-206ENST00000426546 DNAJC5BQ9UF47 199 aa42.38■■■■■ 4.37
CCDC107-206ENST00000426546 NACADO15069 1562 aa42.24■■■■■ 4.35
CCDC107-206ENST00000426546 DCAF8L2P0C7V8 631 aa41.92■■■■■ 4.3
CCDC107-206ENST00000426546 PABPN1Q86U42 306 aaKnown RBP eCLIP41.74■■■■■ 4.27
CCDC107-206ENST00000426546 MYO15BQ96JP2 1530 aa41.71■■■■■ 4.27
CCDC107-206ENST00000426546 UNC13AQ9UPW8 1703 aa41.66■■■■■ 4.26
CCDC107-206ENST00000426546 ZCCHC6Q5VYS8 1495 aaKnown RBP41.41■■■■■ 4.22
CCDC107-206ENST00000426546 BICRAQ9NZM4 1560 aa41.41■■■■■ 4.22
CCDC107-206ENST00000426546 DCAF1Q9Y4B6 1507 aa41.28■■■■■ 4.2
CCDC107-206ENST00000426546 SHROOM4Q9ULL8 1493 aa40.79■■■■■ 4.12
CCDC107-206ENST00000426546 SCRIBQ14160 1630 aa40.66■■■■■ 4.1
CCDC107-206ENST00000426546 CC2D2AQ9P2K1 1620 aa40.53■■■■■ 4.08
CCDC107-206ENST00000426546 CECR2Q9BXF3 1484 aa40.45■■■■■ 4.07
CCDC107-206ENST00000426546 EIF4G1Q04637 1599 aaKnown RBP40.39■■■■■ 4.06
CCDC107-206ENST00000426546 DNAJC5Q9H3Z4 198 aa39.08■■■■□ 3.85
CCDC107-206ENST00000426546 NCAPD3P42695 1498 aa39.01■■■■□ 3.84
CCDC107-206ENST00000426546 ATAD2BQ9ULI0 1458 aa38.86■■■■□ 3.81
CCDC107-206ENST00000426546 SMARCA4P51532 1647 aa38.85■■■■□ 3.81
CCDC107-206ENST00000426546 CUX2O14529 1486 aa38.79■■■■□ 3.8
CCDC107-206ENST00000426546 SMARCA2P51531 1590 aa38.74■■■■□ 3.79
CCDC107-206ENST00000426546 ERCC6Q03468 1493 aa38.74■■■■□ 3.79
CCDC107-206ENST00000426546 BAZ1AQ9NRL2 1556 aaPredicted RBP38.72■■■■□ 3.79
CCDC107-206ENST00000426546 HMGXB3Q12766 1538 aa38.69■■■■□ 3.78
CCDC107-206ENST00000426546 PEG3Q9GZU2 1588 aa38.52■■■■□ 3.76
CCDC107-206ENST00000426546 NESP48681 1621 aa38.49■■■■□ 3.75
CCDC107-206ENST00000426546 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
CCDC107-206ENST00000426546 MROH2BQ7Z745 1585 aa38.4■■■■□ 3.74
CCDC107-206ENST00000426546 THOC2Q8NI27 1593 aaKnown RBP38.16■■■■□ 3.7
CCDC107-206ENST00000426546 LAMC3Q9Y6N6 1575 aa38.16■■■■□ 3.7
CCDC107-206ENST00000426546 KIF21AQ7Z4S6 1674 aa37.98■■■■□ 3.67
CCDC107-206ENST00000426546 WIZO95785 1651 aa37.97■■■■□ 3.67
CCDC107-206ENST00000426546 PDS5BQ9NTI5 1447 aa37.94■■■■□ 3.66
CCDC107-206ENST00000426546 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
CCDC107-206ENST00000426546 RSF1Q96T23 1441 aaPredicted RBP37.71■■■■□ 3.63
CCDC107-206ENST00000426546 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
CCDC107-206ENST00000426546 WDR62O43379 1518 aa37.57■■■■□ 3.61
CCDC107-206ENST00000426546 TOP2AP11388 1531 aaKnown RBP37.55■■■■□ 3.6
CCDC107-206ENST00000426546 CEP164Q9UPV0 1460 aa37.43■■■■□ 3.58
CCDC107-206ENST00000426546 FANCD2Q9BXW9 1451 aa37.38■■■■□ 3.57
CCDC107-206ENST00000426546 CFTRP13569 1480 aa37.34■■■■□ 3.57
CCDC107-206ENST00000426546 TRIM41Q8WV44 630 aa37.23■■■■□ 3.55
CCDC107-206ENST00000426546 URB2Q14146 1524 aaKnown RBP37.1■■■■□ 3.53
CCDC107-206ENST00000426546 PRDM2Q13029 1718 aa37.1■■■■□ 3.53
CCDC107-206ENST00000426546 CCDC88BA6NC98 1476 aa37.06■■■■□ 3.52
CCDC107-206ENST00000426546 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
CCDC107-206ENST00000426546 IFT140Q96RY7 1462 aa36.7■■■■□ 3.47
CCDC107-206ENST00000426546 ZNF608Q9ULD9 1512 aaPredicted RBP36.69■■■■□ 3.46
CCDC107-206ENST00000426546 TOPBP1Q92547 1522 aa36.64■■■■□ 3.46
CCDC107-206ENST00000426546 ABCC8Q09428 1581 aa36.58■■■■□ 3.45
CCDC107-206ENST00000426546 RIMBP3CA6NJZ7 1639 aa36.53■■■■□ 3.44
CCDC107-206ENST00000426546 RIMBP3BA6NNM3 1639 aa36.53■■■■□ 3.44
CCDC107-206ENST00000426546 RIMBP3Q9UFD9 1639 aa36.53■■■■□ 3.44
CCDC107-206ENST00000426546 DNMBPQ6XZF7 1577 aa36.53■■■■□ 3.44
CCDC107-206ENST00000426546 EIF4G3O43432 1585 aaKnown RBP36.46■■■■□ 3.43
CCDC107-206ENST00000426546 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
CCDC107-206ENST00000426546 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
CCDC107-206ENST00000426546 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.42e-8■■■■□ 19.7
CCDC107-206ENST00000426546 POLA1P09884 1462 aaPredicted RBP36.25■■■■□ 3.39
CCDC107-206ENST00000426546 CHD1O14646 1710 aa36.24■■■■□ 3.39
CCDC107-206ENST00000426546 SUPT5HO00267 1087 aaKnown RBP36.16■■■■□ 3.38
CCDC107-206ENST00000426546 RAD54L2Q9Y4B4 1467 aa36.12■■■■□ 3.37
CCDC107-206ENST00000426546 CYB5RLQ6IPT4 315 aa36.11■■■■□ 3.37
CCDC107-206ENST00000426546 FBLN2P98095 1184 aa36.09■■■■□ 3.37
CCDC107-206ENST00000426546 CUX1P39880 1505 aa36.08■■■■□ 3.37
CCDC107-206ENST00000426546 SOGA1O94964 1423 aa36.07■■■■□ 3.36
CCDC107-206ENST00000426546 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
CCDC107-206ENST00000426546 TDRD9Q8NDG6 1382 aaKnown RBP36.04■■■■□ 3.36
CCDC107-206ENST00000426546 ARAP1Q96P48 1450 aa36.02■■■■□ 3.36
CCDC107-206ENST00000426546 WDR97A6NE52 1622 aa36.01■■■■□ 3.35
CCDC107-206ENST00000426546 SNAPC4Q5SXM2 1469 aa35.93■■■■□ 3.34
CCDC107-206ENST00000426546 CLASP1Q7Z460 1538 aa35.83■■■■□ 3.33
CCDC107-206ENST00000426546 MAGI1Q96QZ7 1491 aaPredicted RBP35.82■■■■□ 3.32
CCDC107-206ENST00000426546 CHMP7Q8WUX9 453 aaPredicted RBP35.79■■■■□ 3.32
CCDC107-206ENST00000426546 GRIN2BQ13224 1484 aa35.79■■■■□ 3.32
CCDC107-206ENST00000426546 TRHP20396 242 aaPredicted RBP35.78■■■■□ 3.32
CCDC107-206ENST00000426546 SYNJ1O43426 1573 aa35.76■■■■□ 3.31
CCDC107-206ENST00000426546 SYNJ2O15056 1496 aa35.71■■■■□ 3.31
CCDC107-206ENST00000426546 ABCA10Q8WWZ4 1543 aa35.69■■■■□ 3.3
CCDC107-206ENST00000426546 PBRM1Q86U86 1689 aa35.68■■■■□ 3.3
CCDC107-206ENST00000426546 GAPVD1Q14C86 1478 aa35.65■■■■□ 3.3
CCDC107-206ENST00000426546 ABCA5Q8WWZ7 1642 aa35.64■■■■□ 3.3
CCDC107-206ENST00000426546 BIVM-ERCC5R4GMW8 1640 aa35.64■■■■□ 3.3
CCDC107-206ENST00000426546 TOP2BQ02880 1626 aa35.62■■■■□ 3.29
CCDC107-206ENST00000426546 WRNQ14191 1432 aaPredicted RBP eCLIP35.59■■■■□ 3.29
CCDC107-206ENST00000426546 GRIN2AQ12879 1464 aa35.34■■■■□ 3.25
CCDC107-206ENST00000426546 ADAMTS12P58397 1594 aa35.34■■■■□ 3.25
CCDC107-206ENST00000426546 ERICH3Q5RHP9 1530 aa35.27■■■■□ 3.24
CCDC107-206ENST00000426546 ERCC6L2Q5T890 1561 aa35.26■■■■□ 3.24
CCDC107-206ENST00000426546 NUP160Q12769 1436 aa35.24■■■■□ 3.23
CCDC107-206ENST00000426546 CEP170Q5SW79 1584 aa35.24■■■■□ 3.23
CCDC107-206ENST00000426546 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
CCDC107-206ENST00000426546 SHROOM2Q13796 1616 aa35.12■■■■□ 3.21
CCDC107-206ENST00000426546 AEBP2Q6ZN18 517 aaPredicted RBP34.92■■■■□ 3.18
CCDC107-206ENST00000426546 PRG4Q92954 1404 aaPredicted RBP34.9■■■■□ 3.18
CCDC107-206ENST00000426546 KIF27Q86VH2 1401 aa34.89■■■■□ 3.18
CCDC107-206ENST00000426546 JPH4Q96JJ6 628 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms