RNA–Protein interactions for RNA: ENST00000611428.5

CD99-210, Transcript of CD99 molecule (Xg blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD99, Length 1,243 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-210ENST00000611428 NISCHQ9Y2I1 1504 aa49.09■■■■■ 5.45
CD99-210ENST00000611428 CCDC180Q9P1Z9 1646 aa43.73■■■■■ 4.59
CD99-210ENST00000611428 ABCC9O60706 1549 aa42.87■■■■■ 4.45
CD99-210ENST00000611428 RB1CC1Q8TDY2 1594 aa41.25■■■■■ 4.19
CD99-210ENST00000611428 NACADO15069 1562 aa41.17■■■■■ 4.18
CD99-210ENST00000611428 DCAF8L2P0C7V8 631 aa41.09■■■■■ 4.17
CD99-210ENST00000611428 MYO15BQ96JP2 1530 aa40.9■■■■■ 4.14
CD99-210ENST00000611428 ZCCHC6Q5VYS8 1495 aaKnown RBP40.87■■■■■ 4.13
CD99-210ENST00000611428 DCAF1Q9Y4B6 1507 aa40.66■■■■■ 4.1
CD99-210ENST00000611428 UNC13AQ9UPW8 1703 aa40.18■■■■■ 4.02
CD99-210ENST00000611428 PABPN1Q86U42 306 aaKnown RBP eCLIP40.02■■■■■ 44e-8■■■■■ 30
CD99-210ENST00000611428 BICRAQ9NZM4 1560 aa39.89■■■■□ 3.98
CD99-210ENST00000611428 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
CD99-210ENST00000611428 SHROOM4Q9ULL8 1493 aa39.64■■■■□ 3.94
CD99-210ENST00000611428 DNAJC5BQ9UF47 199 aa39.38■■■■□ 3.89
CD99-210ENST00000611428 EIF4G1Q04637 1599 aaKnown RBP38.92■■■■□ 3.82
CD99-210ENST00000611428 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
CD99-210ENST00000611428 CECR2Q9BXF3 1484 aa38.58■■■■□ 3.77
CD99-210ENST00000611428 SMARCA4P51532 1647 aa38.11■■■■□ 3.69
CD99-210ENST00000611428 BAZ1AQ9NRL2 1556 aaPredicted RBP38.1■■■■□ 3.69
CD99-210ENST00000611428 NCAPD3P42695 1498 aa37.97■■■■□ 3.67
CD99-210ENST00000611428 SMARCA2P51531 1590 aa37.96■■■■□ 3.67
CD99-210ENST00000611428 ATAD2BQ9ULI0 1458 aa37.95■■■■□ 3.67
CD99-210ENST00000611428 HMGXB3Q12766 1538 aa37.79■■■■□ 3.64
CD99-210ENST00000611428 MROH2BQ7Z745 1585 aa37.78■■■■□ 3.64
CD99-210ENST00000611428 PEG3Q9GZU2 1588 aa37.76■■■■□ 3.64
CD99-210ENST00000611428 BAZ1BQ9UIG0 1483 aaKnown RBP37.67■■■■□ 3.62
CD99-210ENST00000611428 WIZO95785 1651 aa37.36■■■■□ 3.57
CD99-210ENST00000611428 RSF1Q96T23 1441 aaPredicted RBP37.33■■■■□ 3.57
CD99-210ENST00000611428 ERCC6Q03468 1493 aa37.05■■■■□ 3.52
CD99-210ENST00000611428 TOP2AP11388 1531 aaKnown RBP37.02■■■■□ 3.52
CD99-210ENST00000611428 NESP48681 1621 aa37.02■■■■□ 3.52
CD99-210ENST00000611428 LAMC3Q9Y6N6 1575 aa37.01■■■■□ 3.52
CD99-210ENST00000611428 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
CD99-210ENST00000611428 PDS5BQ9NTI5 1447 aa36.81■■■■□ 3.48
CD99-210ENST00000611428 CUX2O14529 1486 aa36.71■■■■□ 3.47
CD99-210ENST00000611428 CFTRP13569 1480 aa36.61■■■■□ 3.45
CD99-210ENST00000611428 KIF21AQ7Z4S6 1674 aa36.59■■■■□ 3.45
CD99-210ENST00000611428 CCDC88BA6NC98 1476 aa36.56■■■■□ 3.44
CD99-210ENST00000611428 THOC2Q8NI27 1593 aaKnown RBP36.52■■■■□ 3.44
CD99-210ENST00000611428 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
CD99-210ENST00000611428 CEP164Q9UPV0 1460 aa36.43■■■■□ 3.42
CD99-210ENST00000611428 MRC2Q9UBG0 1479 aa36.39■■■■□ 3.42
CD99-210ENST00000611428 PRDM2Q13029 1718 aa36.3■■■■□ 3.4
CD99-210ENST00000611428 SUPT5HO00267 1087 aaKnown RBP36.29■■■■□ 3.4
CD99-210ENST00000611428 WDR62O43379 1518 aa36.26■■■■□ 3.4
CD99-210ENST00000611428 URB2Q14146 1524 aaKnown RBP36.03■■■■□ 3.36
CD99-210ENST00000611428 ABCC8Q09428 1581 aa35.9■■■■□ 3.34
CD99-210ENST00000611428 TOPBP1Q92547 1522 aa35.82■■■■□ 3.32
CD99-210ENST00000611428 DNMBPQ6XZF7 1577 aa35.78■■■■□ 3.32
CD99-210ENST00000611428 DNAJC5Q9H3Z4 198 aa35.69■■■■□ 3.3
CD99-210ENST00000611428 IFT140Q96RY7 1462 aa35.67■■■■□ 3.3
CD99-210ENST00000611428 POLA1P09884 1462 aaPredicted RBP35.5■■■■□ 3.27
CD99-210ENST00000611428 CUX1P39880 1505 aa35.47■■■■□ 3.27
CD99-210ENST00000611428 ZNF608Q9ULD9 1512 aaPredicted RBP35.43■■■■□ 3.26
CD99-210ENST00000611428 TARBP1Q13395 1621 aaKnown RBP35.41■■■■□ 3.26
CD99-210ENST00000611428 FGD5Q6ZNL6 1462 aa35.4■■■■□ 3.26
CD99-210ENST00000611428 SOGA1O94964 1423 aa35.38■■■■□ 3.25
CD99-210ENST00000611428 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
CD99-210ENST00000611428 RAD54L2Q9Y4B4 1467 aa35.31■■■■□ 3.24
CD99-210ENST00000611428 WRNQ14191 1432 aaPredicted RBP eCLIP35.25■■■■□ 3.23
CD99-210ENST00000611428 AQRO60306 1485 aaKnown RBP eCLIP35.24■■■■□ 3.237e-6■■□□□ 13.1
CD99-210ENST00000611428 WDR97A6NE52 1622 aa35.24■■■■□ 3.23
CD99-210ENST00000611428 TDRD9Q8NDG6 1382 aaKnown RBP35.16■■■■□ 3.22
CD99-210ENST00000611428 OSCARQ8IYS5 282 aa35.16■■■■□ 3.22
CD99-210ENST00000611428 TOP2BQ02880 1626 aa35.16■■■■□ 3.22
CD99-210ENST00000611428 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
CD99-210ENST00000611428 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
CD99-210ENST00000611428 ABCA10Q8WWZ4 1543 aa35.07■■■■□ 3.21
CD99-210ENST00000611428 GRIN2BQ13224 1484 aa35.01■■■■□ 3.19
CD99-210ENST00000611428 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
CD99-210ENST00000611428 SNAPC4Q5SXM2 1469 aa34.94■■■■□ 3.18
CD99-210ENST00000611428 MAGI1Q96QZ7 1491 aaPredicted RBP34.94■■■■□ 3.18
CD99-210ENST00000611428 ABCA5Q8WWZ7 1642 aa34.91■■■■□ 3.18
CD99-210ENST00000611428 FBLN2P98095 1184 aa34.9■■■■□ 3.18
CD99-210ENST00000611428 CHD1O14646 1710 aa34.87■■■■□ 3.17
CD99-210ENST00000611428 PBRM1Q86U86 1689 aa34.86■■■■□ 3.17
CD99-210ENST00000611428 CHMP7Q8WUX9 453 aaPredicted RBP34.81■■■■□ 3.16
CD99-210ENST00000611428 SYNJ2O15056 1496 aa34.78■■■■□ 3.16
CD99-210ENST00000611428 ERICH3Q5RHP9 1530 aa34.67■■■■□ 3.14
CD99-210ENST00000611428 ADAMTS12P58397 1594 aa34.6■■■■□ 3.13
CD99-210ENST00000611428 FHAD1B1AJZ9 1412 aa34.58■■■■□ 3.13
CD99-210ENST00000611428 KIF27Q86VH2 1401 aa34.56■■■■□ 3.12
CD99-210ENST00000611428 ARHGEF11O15085 1522 aa34.54■■■■□ 3.12
CD99-210ENST00000611428 GRIN2AQ12879 1464 aa34.53■■■■□ 3.12
CD99-210ENST00000611428 RIMBP3CA6NJZ7 1639 aa34.53■■■■□ 3.12
CD99-210ENST00000611428 RIMBP3BA6NNM3 1639 aa34.53■■■■□ 3.12
CD99-210ENST00000611428 RIMBP3Q9UFD9 1639 aa34.53■■■■□ 3.12
CD99-210ENST00000611428 CLASP1Q7Z460 1538 aa34.52■■■■□ 3.12
CD99-210ENST00000611428 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
CD99-210ENST00000611428 NUP160Q12769 1436 aa34.38■■■■□ 3.09
CD99-210ENST00000611428 IGF1RP08069 1367 aa34.36■■■■□ 3.09
CD99-210ENST00000611428 CUL7Q14999 1698 aa34.33■■■■□ 3.09
CD99-210ENST00000611428 CEP170Q5SW79 1584 aa34.32■■■■□ 3.08
CD99-210ENST00000611428 CYB5RLQ6IPT4 315 aa34.24■■■■□ 3.07
CD99-210ENST00000611428 ARAP1Q96P48 1450 aa34.23■■■■□ 3.07
CD99-210ENST00000611428 CARMIL1Q5VZK9 1371 aa34.2■■■■□ 3.07
CD99-210ENST00000611428 SHROOM2Q13796 1616 aa34.11■■■■□ 3.05
CD99-210ENST00000611428 RUSC2Q8N2Y8 1516 aa34.09■■■■□ 3.05
CD99-210ENST00000611428 JPH4Q96JJ6 628 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms