Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 HTL1YCR020W-B 237 nt3.05□□□□□ -1.92
NPL3Q01560 RPL20AYMR242C 519 nt3.05□□□□□ -1.92 RIP-Chip
NPL3Q01560 YBR064WYBR064W 429 nt3.05□□□□□ -1.92
NPL3Q01560 KAR3YPR141C 2190 nt3.04□□□□□ -1.92
NPL3Q01560 YDR048CYDR048C 315 nt3.04□□□□□ -1.92
NPL3Q01560 YGL239CYGL239C 315 nt3.04□□□□□ -1.92
NPL3Q01560 LSO2YGR169C-A 279 nt3.04□□□□□ -1.92 RIP-Chip
NPL3Q01560 tQ(UUG)BtQ(UUG)B 72 nt3.04□□□□□ -1.92
NPL3Q01560 HSK3YKL138C-A 210 nt3.04□□□□□ -1.92
NPL3Q01560 YOR008C-AYOR008C-A 225 nt3.04□□□□□ -1.92
NPL3Q01560 AIM9YER080W 1884 nt3.04□□□□□ -1.92
NPL3Q01560 SPO71YDR104C 3738 nt3.04□□□□□ -1.92
NPL3Q01560 SGO1YOR073W 1773 nt3.04□□□□□ -1.92
NPL3Q01560 KAP104YBR017C 2757 nt3.04□□□□□ -1.92
NPL3Q01560 GCV2YMR189W 3105 nt3.03□□□□□ -1.92
NPL3Q01560 MAK21YDR060W 3078 nt3.03□□□□□ -1.92
NPL3Q01560 PTC5YOR090C 1719 nt3.03□□□□□ -1.92
NPL3Q01560 snR55snR55 98 nt3.03□□□□□ -1.92
NPL3Q01560 YDL025W-AYDL025W-A 105 nt3.03□□□□□ -1.92
NPL3Q01560 CSN9YDR179C 489 nt3.03□□□□□ -1.92
NPL3Q01560 YLR342W-AYLR342W-A 174 nt3.03□□□□□ -1.92
NPL3Q01560 FPR1YNL135C 345 nt3.03□□□□□ -1.92
NPL3Q01560 snR48snR48 113 nt3.03□□□□□ -1.92
NPL3Q01560 NCL1YBL024W 2055 nt3.03□□□□□ -1.92
NPL3Q01560 IPT1YDR072C 1584 nt3.03□□□□□ -1.92
NPL3Q01560 DBP6YNR038W 1890 nt3.03□□□□□ -1.93
NPL3Q01560 RLI1YDR091C 1827 nt3.03□□□□□ -1.93
NPL3Q01560 CHS2YBR038W 2892 nt3.02□□□□□ -1.93
NPL3Q01560 YJL020W-AYJL020W-A 258 nt3.02□□□□□ -1.93
NPL3Q01560 LSM7YNL147W 348 nt3.02□□□□□ -1.93
NPL3Q01560 YOR072W-AYOR072W-A 249 nt3.02□□□□□ -1.93
NPL3Q01560 MVP1YMR004W 1536 nt3.02□□□□□ -1.93
NPL3Q01560 CDC20YGL116W 1833 nt3.02□□□□□ -1.93
NPL3Q01560 SAK1YER129W 3429 nt3.02□□□□□ -1.93
NPL3Q01560 ECM21YBL101C 3354 nt3.01□□□□□ -1.93
NPL3Q01560 PRP6YBR055C 2700 nt3.01□□□□□ -1.93
NPL3Q01560 SCW11YGL028C 1629 nt3.01□□□□□ -1.93
NPL3Q01560 FIR1YER032W 2631 nt3.01□□□□□ -1.93
NPL3Q01560 NPR2YEL062W 1848 nt3.01□□□□□ -1.93
NPL3Q01560 YGL024WYGL024W 336 nt3.01□□□□□ -1.93
NPL3Q01560 TIM13YGR181W 318 nt3.01□□□□□ -1.93 RIP-Chip
NPL3Q01560 YJL150WYJL150W 303 nt3.01□□□□□ -1.93
NPL3Q01560 MPH1YIR002C 2982 nt3.01□□□□□ -1.93
NPL3Q01560 RRM3YHR031C 2172 nt3.01□□□□□ -1.93
NPL3Q01560 UBP11YKR098C 2154 nt3.01□□□□□ -1.93
NPL3Q01560 GCD6YDR211W 2139 nt3.01□□□□□ -1.93
NPL3Q01560 YJL070CYJL070C 2667 nt3□□□□□ -1.93
NPL3Q01560 RPL14BYHL001W 417 nt3□□□□□ -1.93
NPL3Q01560 MF(ALPHA)1YPL187W 498 nt3□□□□□ -1.93
NPL3Q01560 YBR121C-AYBR121C-A 159 nt3□□□□□ -1.93
NPL3Q01560 SPO14YKR031C 5052 nt3□□□□□ -1.93
NPL3Q01560 MET6YER091C 2304 nt3□□□□□ -1.93
NPL3Q01560 YER088C-AYER088C-A 324 nt2.99□□□□□ -1.93
NPL3Q01560 GRX8YLR364W 330 nt2.99□□□□□ -1.93
NPL3Q01560 YMR194C-AYMR194C-A 225 nt2.99□□□□□ -1.93
NPL3Q01560 YMR230W-AYMR230W-A 189 nt2.99□□□□□ -1.93
NPL3Q01560 CRS5YOR031W 210 nt2.99□□□□□ -1.93
NPL3Q01560 RGC1YPR115W 3252 nt2.99□□□□□ -1.93
NPL3Q01560 YPP1YGR198W 2454 nt2.99□□□□□ -1.93
NPL3Q01560 YGL052WYGL052W 306 nt2.98□□□□□ -1.93
NPL3Q01560 YIL032CYIL032C 357 nt2.98□□□□□ -1.93
NPL3Q01560 YIL102CYIL102C 306 nt2.98□□□□□ -1.93
NPL3Q01560 HTB2YBL002W 396 nt2.98□□□□□ -1.93 RIP-Chip
NPL3Q01560 YMR141W-AYMR141W-A 225 nt2.98□□□□□ -1.93
NPL3Q01560 RTC6YPL183W-A 282 nt2.98□□□□□ -1.93
NPL3Q01560 YLL032CYLL032C 2478 nt2.98□□□□□ -1.93
NPL3Q01560 TAO3YIL129C 7131 nt2.97□□□□□ -1.93
NPL3Q01560 QCR7YDR529C 384 nt2.97□□□□□ -1.93 RIP-Chip
NPL3Q01560 PRE4YFR050C 801 nt2.97□□□□□ -1.93
NPL3Q01560 YJL135WYJL135W 318 nt2.97□□□□□ -1.93
NPL3Q01560 YOR302WYOR302W 78 nt2.97□□□□□ -1.93 RIP-Chip
NPL3Q01560 YKU70YMR284W 1809 nt2.97□□□□□ -1.93
NPL3Q01560 SGD1YLR336C 2700 nt2.97□□□□□ -1.93
NPL3Q01560 YLR278CYLR278C 4026 nt2.96□□□□□ -1.93
NPL3Q01560 PRP39YML046W 1890 nt2.96□□□□□ -1.93
NPL3Q01560 GPG1YGL121C 381 nt2.96□□□□□ -1.94
NPL3Q01560 YBR178WYBR178W 375 nt2.96□□□□□ -1.94
NPL3Q01560 SDC25YLL016W 3147 nt2.96□□□□□ -1.94
NPL3Q01560 RIM20YOR275C 1986 nt2.96□□□□□ -1.94
NPL3Q01560 SSN2YDR443C 4263 nt2.96□□□□□ -1.94
NPL3Q01560 HRD3YLR207W 2502 nt2.95□□□□□ -1.94
NPL3Q01560 RRP12YPL012W 3687 nt2.95□□□□□ -1.94
NPL3Q01560 DIS3YOL021C 3006 nt2.95□□□□□ -1.94
NPL3Q01560 FMP16YDR070C 282 nt2.95□□□□□ -1.94
NPL3Q01560 YEL014CYEL014C 306 nt2.95□□□□□ -1.94
NPL3Q01560 YHL042WYHL042W 453 nt2.95□□□□□ -1.94
NPL3Q01560 RPS27AYKL156W 249 nt2.95□□□□□ -1.94 RIP-Chip
NPL3Q01560 RPL36AYMR194W 303 nt2.95□□□□□ -1.94
NPL3Q01560 RPL36BYPL249C-A 303 nt2.95□□□□□ -1.94
NPL3Q01560 COG8YML071C 1824 nt2.95□□□□□ -1.94
NPL3Q01560 VIK1YPL253C 1944 nt2.95□□□□□ -1.94
NPL3Q01560 SNU114YKL173W 3027 nt2.95□□□□□ -1.94
NPL3Q01560 DOT6YER088C 2013 nt2.94□□□□□ -1.94
NPL3Q01560 YIL082W-AYIL082W-A 4497 nt2.94□□□□□ -1.94
NPL3Q01560 YHL005CYHL005C 393 nt2.94□□□□□ -1.94
NPL3Q01560 YPL216WYPL216W 3309 nt2.93□□□□□ -1.94
NPL3Q01560 SOK2YMR016C 2358 nt2.93□□□□□ -1.94
NPL3Q01560 SLH1YGR271W 5904 nt2.93□□□□□ -1.94
NPL3Q01560 INP52YNL106C 3552 nt2.93□□□□□ -1.94
NPL3Q01560 NUP120YKL057C 3114 nt2.93□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms