Protein–RNA interactions for Protein: Q01560
NPL3, Nucleolar protein 3, yeast
Retrieved 100 of 1,038 protein–RNA pairs in 15 ms
NPL3, Nucleolar protein 3, yeast
Known RBP RIP-Chip data
Length 414 aa.
Protein | RNA | Prediction (catRAPID) | Interaction (RIP-Chip) | |||||
---|---|---|---|---|---|---|---|---|
Gene | UniProt Accession | Gene | Ensembl Transcript ID | Length | Transcript Status | Prediction Score | Prediction z-Score | Detected Interaction |
NPL3 | Q01560 | SCS3 | YGL126W | 1143 nt | 16.58 | ■□□□□ 0.24 | RIP-Chip | |
NPL3 | Q01560 | PKP1 | YIL042C | 1185 nt | 15.54 | ■□□□□ 0.08 | RIP-Chip | |
NPL3 | Q01560 | RTC3 | YHR087W | 336 nt | 14.92 | □□□□□ -0.02 | RIP-Chip | |
NPL3 | Q01560 | RRN5 | YLR141W | 1092 nt | 14.37 | □□□□□ -0.11 | RIP-Chip | |
NPL3 | Q01560 | DEP1 | YAL013W | 1218 nt | 13.95 | □□□□□ -0.18 | RIP-Chip | |
NPL3 | Q01560 | RPN10 | YHR200W | 807 nt | 13.79 | □□□□□ -0.2 | RIP-Chip | |
NPL3 | Q01560 | YNL208W | YNL208W | 600 nt | 13.74 | □□□□□ -0.21 | RIP-Chip | |
NPL3 | Q01560 | PUN1 | YLR414C | 792 nt | 13.36 | □□□□□ -0.27 | RIP-Chip | |
NPL3 | Q01560 | PTC2 | YER089C | 1395 nt | 13.17 | □□□□□ -0.3 | RIP-Chip | |
NPL3 | Q01560 | YGR021W | YGR021W | 873 nt | 12.84 | □□□□□ -0.35 | RIP-Chip | |
NPL3 | Q01560 | FIS1 | YIL065C | 468 nt | 12.79 | □□□□□ -0.36 | RIP-Chip | |
NPL3 | Q01560 | PHO4 | YFR034C | 939 nt | 12.71 | □□□□□ -0.37 | RIP-Chip | |
NPL3 | Q01560 | MNP1 | YGL068W | 585 nt | 12.7 | □□□□□ -0.38 | RIP-Chip | |
NPL3 | Q01560 | LSM3 | YLR438C-A | 270 nt | 12.63 | □□□□□ -0.39 | RIP-Chip | |
NPL3 | Q01560 | NPL3 | YDR432W | 1245 nt | 12.61 | □□□□□ -0.39 | RIP-Chip | |
NPL3 | Q01560 | ALF1 | YNL148C | 765 nt | 12.43 | □□□□□ -0.42 | RIP-Chip | |
NPL3 | Q01560 | WHI5 | YOR083W | 888 nt | 12.17 | □□□□□ -0.46 | RIP-Chip | |
NPL3 | Q01560 | YCH1 | YGR203W | 447 nt | 11.94 | □□□□□ -0.5 | RIP-Chip | |
NPL3 | Q01560 | IMP2' | YIL154C | 1041 nt | 11.94 | □□□□□ -0.5 | RIP-Chip | |
NPL3 | Q01560 | DSK2 | YMR276W | 1122 nt | 11.93 | □□□□□ -0.5 | RIP-Chip | |
NPL3 | Q01560 | EMI2 | YDR516C | 1503 nt | 11.91 | □□□□□ -0.5 | RIP-Chip | |
NPL3 | Q01560 | YDR433W | YDR433W | 441 nt | 11.7 | □□□□□ -0.54 | RIP-Chip | |
NPL3 | Q01560 | GIS3 | YLR094C | 1509 nt | 11.67 | □□□□□ -0.54 | RIP-Chip | |
NPL3 | Q01560 | CUE1 | YMR264W | 612 nt | 11.67 | □□□□□ -0.54 | RIP-Chip | |
NPL3 | Q01560 | LPX1 | YOR084W | 1164 nt | 11.66 | □□□□□ -0.54 | RIP-Chip | |
NPL3 | Q01560 | MRPL8 | YJL063C | 717 nt | 11.53 | □□□□□ -0.56 | RIP-Chip | |
NPL3 | Q01560 | YCL042W | YCL042W | 360 nt | 11.39 | □□□□□ -0.59 | RIP-Chip | |
NPL3 | Q01560 | FMP52 | YER004W | 696 nt | 11.38 | □□□□□ -0.59 | RIP-Chip | |
NPL3 | Q01560 | UBX6 | YJL048C | 1191 nt | 11.32 | □□□□□ -0.6 | RIP-Chip | |
NPL3 | Q01560 | SNF6 | YHL025W | 999 nt | 11.21 | □□□□□ -0.61 | RIP-Chip | |
NPL3 | Q01560 | RTG1 | YOL067C | 534 nt | 11.21 | □□□□□ -0.61 | RIP-Chip | |
NPL3 | Q01560 | PTH1 | YHR189W | 573 nt | 11.2 | □□□□□ -0.62 | RIP-Chip | |
NPL3 | Q01560 | HUA1 | YGR268C | 597 nt | 11.08 | □□□□□ -0.64 | RIP-Chip | |
NPL3 | Q01560 | YIH1 | YCR059C | 777 nt | 11.06 | □□□□□ -0.64 | RIP-Chip | |
NPL3 | Q01560 | RNQ1 | YCL028W | 1218 nt | 11.06 | □□□□□ -0.64 | RIP-Chip | |
NPL3 | Q01560 | BOP3 | YNL042W | 1191 nt | 10.94 | □□□□□ -0.66 | RIP-Chip | |
NPL3 | Q01560 | TRM5 | YHR070W | 1500 nt | 10.84 | □□□□□ -0.67 | RIP-Chip | |
NPL3 | Q01560 | DDR2 | YOL052C-A | 186 nt | 10.81 | □□□□□ -0.68 | RIP-Chip | |
NPL3 | Q01560 | SPC25 | YER018C | 666 nt | 10.73 | □□□□□ -0.69 | RIP-Chip | |
NPL3 | Q01560 | PTK1 | YKL198C | 1989 nt | 10.68 | □□□□□ -0.7 | RIP-Chip | |
NPL3 | Q01560 | VPS60 | YDR486C | 690 nt | 10.64 | □□□□□ -0.71 | RIP-Chip | |
NPL3 | Q01560 | PRE6 | YOL038W | 765 nt | 10.52 | □□□□□ -0.73 | RIP-Chip | |
NPL3 | Q01560 | MIC12 | YBR262C | 321 nt | 10.43 | □□□□□ -0.74 | RIP-Chip | |
NPL3 | Q01560 | HHO1 | YPL127C | 777 nt | 10.39 | □□□□□ -0.75 | RIP-Chip | |
NPL3 | Q01560 | GLK1 | YCL040W | 1503 nt | 10.32 | □□□□□ -0.76 | RIP-Chip | |
NPL3 | Q01560 | DUT1 | YBR252W | 444 nt | 10.13 | □□□□□ -0.79 | RIP-Chip | |
NPL3 | Q01560 | MRP20 | YDR405W | 792 nt | 9.94 | □□□□□ -0.82 | RIP-Chip | |
NPL3 | Q01560 | NDI1 | YML120C | 1542 nt | 9.9 | □□□□□ -0.82 | RIP-Chip | |
NPL3 | Q01560 | POM34 | YLR018C | 900 nt | 9.8 | □□□□□ -0.84 | RIP-Chip | |
NPL3 | Q01560 | TOM6 | YOR045W | 186 nt | 9.8 | □□□□□ -0.84 | RIP-Chip | |
NPL3 | Q01560 | PEX2 | YJL210W | 816 nt | 9.76 | □□□□□ -0.85 | RIP-Chip | |
NPL3 | Q01560 | CYT2 | YKL087C | 675 nt | 9.75 | □□□□□ -0.85 | RIP-Chip | |
NPL3 | Q01560 | SDH5 | YOL071W | 489 nt | 9.7 | □□□□□ -0.86 | RIP-Chip | |
NPL3 | Q01560 | TIF6 | YPR016C | 738 nt | 9.68 | □□□□□ -0.86 | RIP-Chip | |
NPL3 | Q01560 | SAM35 | YHR083W | 990 nt | 9.58 | □□□□□ -0.88 | RIP-Chip | |
NPL3 | Q01560 | CAB5 | YDR196C | 726 nt | 9.38 | □□□□□ -0.91 | RIP-Chip | |
NPL3 | Q01560 | LIP1 | YMR298W | 453 nt | 9.38 | □□□□□ -0.91 | RIP-Chip | |
NPL3 | Q01560 | APT2 | YDR441C | 546 nt | 9.26 | □□□□□ -0.93 | RIP-Chip | |
NPL3 | Q01560 | YPI1 | YFR003C | 468 nt | 9.26 | □□□□□ -0.93 | RIP-Chip | |
NPL3 | Q01560 | RIM8 | YGL045W | 1629 nt | 9.23 | □□□□□ -0.93 | RIP-Chip | |
NPL3 | Q01560 | SHY1 | YGR112W | 1170 nt | 9.21 | □□□□□ -0.94 | RIP-Chip | |
NPL3 | Q01560 | PET8 | YNL003C | 855 nt | 9.09 | □□□□□ -0.95 | RIP-Chip | |
NPL3 | Q01560 | COG1 | YGL223C | 1254 nt | 9.06 | □□□□□ -0.96 | RIP-Chip | |
NPL3 | Q01560 | PHO23 | YNL097C | 993 nt | 9.04 | □□□□□ -0.96 | RIP-Chip | |
NPL3 | Q01560 | ESS1 | YJR017C | 513 nt | 9.03 | □□□□□ -0.96 | RIP-Chip | |
NPL3 | Q01560 | YJL118W | YJL118W | 660 nt | 9 | □□□□□ -0.97 | RIP-Chip | |
NPL3 | Q01560 | CWC15 | YDR163W | 528 nt | 8.99 | □□□□□ -0.97 | RIP-Chip | |
NPL3 | Q01560 | FUB1 | YCR076C | 753 nt | 8.94 | □□□□□ -0.98 | RIP-Chip | |
NPL3 | Q01560 | CPD1 | YGR247W | 720 nt | 8.93 | □□□□□ -0.98 | RIP-Chip | |
NPL3 | Q01560 | YPS3 | YLR121C | 1527 nt | 8.91 | □□□□□ -0.98 | RIP-Chip | |
NPL3 | Q01560 | YTH1 | YPR107C | 627 nt | 8.85 | □□□□□ -0.99 | RIP-Chip | |
NPL3 | Q01560 | SEN2 | YLR105C | 1134 nt | 8.84 | □□□□□ -0.99 | RIP-Chip | |
NPL3 | Q01560 | HIS2 | YFR025C | 1008 nt | 8.83 | □□□□□ -1 | RIP-Chip | |
NPL3 | Q01560 | TAF13 | YML098W | 504 nt | 8.81 | □□□□□ -1 | RIP-Chip | |
NPL3 | Q01560 | LSM5 | YER146W | 282 nt | 8.8 | □□□□□ -1 | RIP-Chip | |
NPL3 | Q01560 | TOM20 | YGR082W | 552 nt | 8.76 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | GID7 | YCL039W | 2238 nt | 8.75 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | ASP3-1 | YLR155C | 1089 nt | 8.75 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | ASP3-2 | YLR157C | 1089 nt | 8.75 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | ASP3-3 | YLR158C | 1089 nt | 8.75 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | ASP3-4 | YLR160C | 1089 nt | 8.75 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | TPO4 | YOR273C | 1980 nt | 8.73 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | IML3 | YBR107C | 738 nt | 8.73 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | OPI10 | YOL032W | 741 nt | 8.72 | □□□□□ -1.01 | RIP-Chip | |
NPL3 | Q01560 | STP3 | YLR375W | 1032 nt | 8.65 | □□□□□ -1.02 | RIP-Chip | |
NPL3 | Q01560 | YHL008C | YHL008C | 1884 nt | 8.64 | □□□□□ -1.03 | RIP-Chip | |
NPL3 | Q01560 | DIG1 | YPL049C | 1359 nt | 8.63 | □□□□□ -1.03 | RIP-Chip | |
NPL3 | Q01560 | ENT4 | YLL038C | 744 nt | 8.63 | □□□□□ -1.03 | RIP-Chip | |
NPL3 | Q01560 | APS2 | YJR058C | 444 nt | 8.56 | □□□□□ -1.04 | RIP-Chip | |
NPL3 | Q01560 | TVP23 | YDR084C | 600 nt | 8.55 | □□□□□ -1.04 | RIP-Chip | |
NPL3 | Q01560 | URA8 | YJR103W | 1737 nt | 8.54 | □□□□□ -1.04 | RIP-Chip | |
NPL3 | Q01560 | OPI3 | YJR073C | 621 nt | 8.52 | □□□□□ -1.05 | RIP-Chip | |
NPL3 | Q01560 | IDP3 | YNL009W | 1263 nt | 8.51 | □□□□□ -1.05 | RIP-Chip | |
NPL3 | Q01560 | SPE2 | YOL052C | 1191 nt | 8.44 | □□□□□ -1.06 | RIP-Chip | |
NPL3 | Q01560 | IGD1 | YFR017C | 588 nt | 8.43 | □□□□□ -1.06 | RIP-Chip | |
NPL3 | Q01560 | SOD2 | YHR008C | 702 nt | 8.39 | □□□□□ -1.07 | RIP-Chip | |
NPL3 | Q01560 | FSH2 | YMR222C | 672 nt | 8.37 | □□□□□ -1.07 | RIP-Chip | |
NPL3 | Q01560 | YMR265C | YMR265C | 1386 nt | 8.36 | □□□□□ -1.07 | RIP-Chip | |
NPL3 | Q01560 | MGM101 | YJR144W | 810 nt | 8.36 | □□□□□ -1.07 | RIP-Chip | |
NPL3 | Q01560 | CDD1 | YLR245C | 429 nt | 8.34 | □□□□□ -1.07 | RIP-Chip |