RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C FAP1P53971 965 aa11.77□□□□□ -0.53
CSN9YDR179C MTC1P47018 478 aaKnown RBP11.29□□□□□ -0.6
CSN9YDR179C PRY3P47033 881 aa11.17□□□□□ -0.62
CSN9YDR179C YCK3P39962 524 aa10.75□□□□□ -0.69
CSN9YDR179C AAD16Q02895 342 aa10.5□□□□□ -0.73
CSN9YDR179C PRI1P10363 409 aa10.41□□□□□ -0.74
CSN9YDR179C HAA1Q12753 694 aaKnown RBP10.41□□□□□ -0.74
CSN9YDR179C TSR3Q12094 313 aaKnown RBP9.74□□□□□ -0.85
CSN9YDR179C RPG1P38249 964 aaKnown RBP9.62□□□□□ -0.87
CSN9YDR179C ISW2Q08773 1120 aa9.6□□□□□ -0.87
CSN9YDR179C YGL015CP33199 130 aa9.35□□□□□ -0.91
CSN9YDR179C BUD31P25337 157 aaPredicted RBP9.3□□□□□ -0.92
CSN9YDR179C MRPL32P25348 183 aa9.28□□□□□ -0.92
CSN9YDR179C DRS1P32892 752 aaKnown RBP8.96□□□□□ -0.98
CSN9YDR179C CDC27P38042 758 aa8.68□□□□□ -1.02
CSN9YDR179C SIS1P25294 352 aaKnown RBP8.61□□□□□ -1.03
CSN9YDR179C RSE1Q04693 1361 aaKnown RBP8.56□□□□□ -1.04
CSN9YDR179C MAP2P38174 421 aaKnown RBP8.54□□□□□ -1.04
CSN9YDR179C UBP10P53874 792 aaPredicted RBP8.54□□□□□ -1.04
CSN9YDR179C DIP2Q12220 943 aaPredicted RBP8.44□□□□□ -1.06
CSN9YDR179C REB1P21538 810 aa8.43□□□□□ -1.06
CSN9YDR179C RPL17AP05740 184 aaKnown RBP8.4□□□□□ -1.06
CSN9YDR179C RPL17BP46990 184 aaKnown RBP8.4□□□□□ -1.06
CSN9YDR179C UBP9P39967 754 aa8.32□□□□□ -1.08
CSN9YDR179C YKR023WP36119 530 aaKnown RBP8.3□□□□□ -1.08
CSN9YDR179C TGL3P40308 642 aa8.21□□□□□ -1.1
CSN9YDR179C TIF4632P39936 914 aaKnown RBP8.12□□□□□ -1.11
CSN9YDR179C DCD1P06773 312 aa8.1□□□□□ -1.11
CSN9YDR179C TFC8Q12308 588 aa8.09□□□□□ -1.11
CSN9YDR179C HOP09932 586 aa8.07□□□□□ -1.12
CSN9YDR179C SCY1P53009 804 aa8.06□□□□□ -1.12
CSN9YDR179C SPT21P35209 758 aa8.04□□□□□ -1.12
CSN9YDR179C SLX5P32828 619 aaKnown RBP8.01□□□□□ -1.13
CSN9YDR179C YBL029C-AQ3E756 94 aa7.8□□□□□ -1.16
CSN9YDR179C AVT3P36062 692 aa7.78□□□□□ -1.16
CSN9YDR179C MST1P07236 462 aa7.77□□□□□ -1.17
CSN9YDR179C BCH2P36122 765 aa7.77□□□□□ -1.17
CSN9YDR179C VNX1P42839 908 aa7.67□□□□□ -1.18
CSN9YDR179C AIR2Q12476 344 aaKnown RBP7.64□□□□□ -1.19
CSN9YDR179C YOR238WQ08634 303 aa7.54□□□□□ -1.2
CSN9YDR179C FKH1P40466 484 aa7.53□□□□□ -1.2
CSN9YDR179C SPP1Q03012 353 aa7.53□□□□□ -1.2
CSN9YDR179C YJL171CP46992 396 aa7.49□□□□□ -1.21
CSN9YDR179C BDF1P35817 686 aa7.46□□□□□ -1.22
CSN9YDR179C EPS1P40557 701 aa7.43□□□□□ -1.22
CSN9YDR179C NSR1P27476 414 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
CSN9YDR179C RIM101P33400 625 aa7.4□□□□□ -1.22
CSN9YDR179C WSC3Q12215 556 aa7.4□□□□□ -1.22
CSN9YDR179C TIF11P38912 153 aaKnown RBP7.38□□□□□ -1.23
CSN9YDR179C BMT6Q12291 365 aa7.31□□□□□ -1.24
CSN9YDR179C YAP5P40574 245 aa7.27□□□□□ -1.25
CSN9YDR179C IOC2Q12072 812 aa7.27□□□□□ -1.25
CSN9YDR179C LDB19Q12502 818 aa7.27□□□□□ -1.25
CSN9YDR179C BFR2Q06631 534 aaKnown RBP7.19□□□□□ -1.26
CSN9YDR179C ULI1P43604 169 aa7.18□□□□□ -1.26
CSN9YDR179C OXP1P28273 1286 aa7.14□□□□□ -1.27
CSN9YDR179C RGA2Q06407 1009 aa7.14□□□□□ -1.27
CSN9YDR179C GTT3P39996 337 aa7.08□□□□□ -1.28
CSN9YDR179C RTG1P32607 177 aa7□□□□□ -1.29
CSN9YDR179C NCR1Q12200 1170 aa6.99□□□□□ -1.29
CSN9YDR179C BCK2P33306 851 aa6.94□□□□□ -1.3
CSN9YDR179C PIB1Q06651 286 aa6.93□□□□□ -1.3
CSN9YDR179C MSB4Q12317 492 aa6.93□□□□□ -1.3
CSN9YDR179C BBC1P47068 1157 aa6.92□□□□□ -1.3
CSN9YDR179C TRP5P00931 707 aaKnown RBP6.91□□□□□ -1.3
CSN9YDR179C PTP3P40048 928 aa6.91□□□□□ -1.3
CSN9YDR179C AI2P03876 854 aa6.9□□□□□ -1.3
CSN9YDR179C EAP1P36041 632 aaKnown RBP6.9□□□□□ -1.3
CSN9YDR179C SEC61P32915 480 aa6.88□□□□□ -1.31
CSN9YDR179C YNL035CP53962 389 aaKnown RBP6.87□□□□□ -1.31
CSN9YDR179C YIL055CP40523 627 aaKnown RBP6.85□□□□□ -1.31
CSN9YDR179C RSM7P47150 247 aa6.85□□□□□ -1.31
CSN9YDR179C YOL036WQ08206 761 aa6.84□□□□□ -1.31
CSN9YDR179C SET4P42948 560 aa6.83□□□□□ -1.32
CSN9YDR179C CHL1P22516 861 aaPredicted RBP6.79□□□□□ -1.32
CSN9YDR179C RGA1P39083 1007 aa6.79□□□□□ -1.32
CSN9YDR179C SAP30P38429 201 aa6.77□□□□□ -1.33
CSN9YDR179C DAN4P47179 1161 aa6.74□□□□□ -1.33
CSN9YDR179C PRE3P38624 215 aa6.73□□□□□ -1.33
CSN9YDR179C XDJ1P39102 459 aa6.71□□□□□ -1.34
CSN9YDR179C TFG1P41895 735 aaPredicted RBP6.67□□□□□ -1.34
CSN9YDR179C YDL129WQ07555 291 aa6.67□□□□□ -1.34
CSN9YDR179C SAM3Q08986 587 aa6.63□□□□□ -1.35
CSN9YDR179C VRP1P37370 817 aa6.62□□□□□ -1.35
CSN9YDR179C SRC1Q03707 834 aa6.61□□□□□ -1.35
CSN9YDR179C DPS1P04802 557 aaKnown RBP6.6□□□□□ -1.35
CSN9YDR179C YDR344CQ05510 147 aa6.6□□□□□ -1.35
CSN9YDR179C VMA1P17255 1071 aaKnown RBP6.59□□□□□ -1.35
CSN9YDR179C PSD2P53037 1138 aaKnown RBP6.59□□□□□ -1.35
CSN9YDR179C JIP4Q03361 876 aa6.59□□□□□ -1.35
CSN9YDR179C YAH1Q12184 172 aaKnown RBP6.58□□□□□ -1.36
CSN9YDR179C MRM1P25270 412 aa6.57□□□□□ -1.36
CSN9YDR179C DBP1P24784 617 aaKnown RBP6.55□□□□□ -1.36
CSN9YDR179C VPS29P38759 282 aa6.53□□□□□ -1.36
CSN9YDR179C YFR006WP43590 535 aa6.52□□□□□ -1.37
CSN9YDR179C YMR1P47147 688 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
CSN9YDR179C YLR271WQ06152 274 aa6.51□□□□□ -1.37
CSN9YDR179C STS1P38637 319 aa6.5□□□□□ -1.37
CSN9YDR179C PTC4P38089 393 aa6.46□□□□□ -1.38
CSN9YDR179C YEL023CP39992 682 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms