RNA–Protein interactions for RNA: YKL138C-A

HSK3, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeastyeast

Gene HSK3, Length 210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSK3YKL138C-A MTC1P47018 478 aaKnown RBP10.49□□□□□ -0.73
HSK3YKL138C-A FAP1P53971 965 aa10.15□□□□□ -0.78
HSK3YKL138C-A PRY3P47033 881 aa9.58□□□□□ -0.88
HSK3YKL138C-A AAD16Q02895 342 aa9.22□□□□□ -0.93
HSK3YKL138C-A PRI1P10363 409 aa9.21□□□□□ -0.94
HSK3YKL138C-A DRS1P32892 752 aaKnown RBP9.11□□□□□ -0.95
HSK3YKL138C-A YCK3P39962 524 aa9.07□□□□□ -0.96
HSK3YKL138C-A HAA1Q12753 694 aaKnown RBP8.95□□□□□ -0.98
HSK3YKL138C-A ISW2Q08773 1120 aa8.81□□□□□ -1
HSK3YKL138C-A RPG1P38249 964 aaKnown RBP8.75□□□□□ -1.01
HSK3YKL138C-A TSR3Q12094 313 aaKnown RBP8.66□□□□□ -1.02
HSK3YKL138C-A MRPL32P25348 183 aa8.31□□□□□ -1.08
HSK3YKL138C-A DIP2Q12220 943 aaPredicted RBP8.22□□□□□ -1.09
HSK3YKL138C-A YGL015CP33199 130 aa8.15□□□□□ -1.1
HSK3YKL138C-A RSE1Q04693 1361 aaKnown RBP8.14□□□□□ -1.11
HSK3YKL138C-A REB1P21538 810 aa7.94□□□□□ -1.14
HSK3YKL138C-A RPL17AP05740 184 aaKnown RBP7.93□□□□□ -1.14
HSK3YKL138C-A RPL17BP46990 184 aaKnown RBP7.93□□□□□ -1.14
HSK3YKL138C-A CDC27P38042 758 aa7.81□□□□□ -1.16
HSK3YKL138C-A BUD31P25337 157 aaPredicted RBP7.79□□□□□ -1.16
HSK3YKL138C-A AVT3P36062 692 aa7.76□□□□□ -1.17
HSK3YKL138C-A UBP10P53874 792 aaPredicted RBP7.66□□□□□ -1.18
HSK3YKL138C-A MAP2P38174 421 aaKnown RBP7.64□□□□□ -1.19
HSK3YKL138C-A YKR023WP36119 530 aaKnown RBP7.62□□□□□ -1.19
HSK3YKL138C-A SPT21P35209 758 aa7.57□□□□□ -1.2
HSK3YKL138C-A TFC8Q12308 588 aa7.46□□□□□ -1.22
HSK3YKL138C-A DCD1P06773 312 aa7.45□□□□□ -1.22
HSK3YKL138C-A HOP09932 586 aa7.45□□□□□ -1.22
HSK3YKL138C-A SCY1P53009 804 aa7.36□□□□□ -1.23
HSK3YKL138C-A TIF4632P39936 914 aaKnown RBP7.34□□□□□ -1.23
HSK3YKL138C-A SIS1P25294 352 aaKnown RBP7.33□□□□□ -1.24
HSK3YKL138C-A TGL3P40308 642 aa7.32□□□□□ -1.24
HSK3YKL138C-A SLX5P32828 619 aaKnown RBP7.3□□□□□ -1.24
HSK3YKL138C-A UBP9P39967 754 aa7.29□□□□□ -1.24
HSK3YKL138C-A BFR2Q06631 534 aaKnown RBP7.25□□□□□ -1.25
HSK3YKL138C-A BCH2P36122 765 aa7.19□□□□□ -1.26
HSK3YKL138C-A RIM101P33400 625 aa7.14□□□□□ -1.27
HSK3YKL138C-A EPS1P40557 701 aa6.96□□□□□ -1.3
HSK3YKL138C-A MST1P07236 462 aa6.95□□□□□ -1.3
HSK3YKL138C-A BDF1P35817 686 aa6.95□□□□□ -1.3
HSK3YKL138C-A YBL029C-AQ3E756 94 aa6.94□□□□□ -1.3
HSK3YKL138C-A OXP1P28273 1286 aa6.88□□□□□ -1.31
HSK3YKL138C-A YOR238WQ08634 303 aa6.88□□□□□ -1.31
HSK3YKL138C-A VNX1P42839 908 aa6.84□□□□□ -1.31
HSK3YKL138C-A NSR1P27476 414 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
HSK3YKL138C-A PTP3P40048 928 aa6.78□□□□□ -1.32
HSK3YKL138C-A SPP1Q03012 353 aa6.75□□□□□ -1.33
HSK3YKL138C-A YIL055CP40523 627 aaKnown RBP6.74□□□□□ -1.33
HSK3YKL138C-A YAP5P40574 245 aa6.74□□□□□ -1.33
HSK3YKL138C-A WSC3Q12215 556 aa6.73□□□□□ -1.33
HSK3YKL138C-A BBC1P47068 1157 aa6.71□□□□□ -1.34
HSK3YKL138C-A AIR2Q12476 344 aaKnown RBP6.71□□□□□ -1.34
HSK3YKL138C-A FKH1P40466 484 aa6.68□□□□□ -1.34
HSK3YKL138C-A AI2P03876 854 aa6.67□□□□□ -1.34
HSK3YKL138C-A RSM7P47150 247 aa6.67□□□□□ -1.34
HSK3YKL138C-A TIF11P38912 153 aaKnown RBP6.66□□□□□ -1.34
HSK3YKL138C-A YJL171CP46992 396 aa6.65□□□□□ -1.34
HSK3YKL138C-A GTT3P39996 337 aa6.61□□□□□ -1.35
HSK3YKL138C-A YAH1Q12184 172 aaKnown RBP6.57□□□□□ -1.36
HSK3YKL138C-A LDB19Q12502 818 aa6.57□□□□□ -1.36
HSK3YKL138C-A ULI1P43604 169 aa6.54□□□□□ -1.36
HSK3YKL138C-A IOC2Q12072 812 aa6.54□□□□□ -1.36
HSK3YKL138C-A TFA1P36100 482 aa6.52□□□□□ -1.37
HSK3YKL138C-A BMT6Q12291 365 aa6.52□□□□□ -1.37
HSK3YKL138C-A PIB1Q06651 286 aa6.49□□□□□ -1.37
HSK3YKL138C-A YLR271WQ06152 274 aa6.45□□□□□ -1.38
HSK3YKL138C-A PSD2P53037 1138 aaKnown RBP6.44□□□□□ -1.38
HSK3YKL138C-A MSB4Q12317 492 aa6.44□□□□□ -1.38
HSK3YKL138C-A EAP1P36041 632 aaKnown RBP6.4□□□□□ -1.38
HSK3YKL138C-A MRM1P25270 412 aa6.39□□□□□ -1.39
HSK3YKL138C-A RTG1P32607 177 aa6.39□□□□□ -1.39
HSK3YKL138C-A YOL036WQ08206 761 aa6.38□□□□□ -1.39
HSK3YKL138C-A TRP5P00931 707 aaKnown RBP6.36□□□□□ -1.39
HSK3YKL138C-A SET4P42948 560 aa6.36□□□□□ -1.39
HSK3YKL138C-A NCR1Q12200 1170 aa6.35□□□□□ -1.39
HSK3YKL138C-A SEC61P32915 480 aa6.31□□□□□ -1.4
HSK3YKL138C-A YNL035CP53962 389 aaKnown RBP6.31□□□□□ -1.4
HSK3YKL138C-A YMR1P47147 688 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
HSK3YKL138C-A DBP1P24784 617 aaKnown RBP6.27□□□□□ -1.41
HSK3YKL138C-A VPS29P38759 282 aa6.27□□□□□ -1.41
HSK3YKL138C-A VMA1P17255 1071 aaKnown RBP6.26□□□□□ -1.41
HSK3YKL138C-A YFR006WP43590 535 aa6.26□□□□□ -1.41
HSK3YKL138C-A SAM3Q08986 587 aa6.25□□□□□ -1.41
HSK3YKL138C-A STS1P38637 319 aa6.23□□□□□ -1.41
HSK3YKL138C-A RTG3P38165 486 aa6.2□□□□□ -1.42
HSK3YKL138C-A SAP30P38429 201 aa6.2□□□□□ -1.42
HSK3YKL138C-A TFG1P41895 735 aaPredicted RBP6.2□□□□□ -1.42
HSK3YKL138C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
HSK3YKL138C-A BCK2P33306 851 aa6.19□□□□□ -1.42
HSK3YKL138C-A DAN4P47179 1161 aa6.19□□□□□ -1.42
HSK3YKL138C-A CST9Q06032 482 aa6.19□□□□□ -1.42
HSK3YKL138C-A SSP1P38871 571 aa6.18□□□□□ -1.42
HSK3YKL138C-A JIP4Q03361 876 aa6.17□□□□□ -1.42
HSK3YKL138C-A CHL1P22516 861 aaPredicted RBP6.15□□□□□ -1.42
HSK3YKL138C-A YDL129WQ07555 291 aa6.15□□□□□ -1.42
HSK3YKL138C-A ABP1P15891 592 aaKnown RBP6.13□□□□□ -1.43
HSK3YKL138C-A PRE3P38624 215 aa6.12□□□□□ -1.43
HSK3YKL138C-A GYP5Q12344 894 aa6.12□□□□□ -1.43
HSK3YKL138C-A RCR1P38212 213 aa6.11□□□□□ -1.43
HSK3YKL138C-A MGA2P40578 1113 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms