RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR048CYDR048C FAP1P53971 965 aa13.4□□□□□ -0.26
YDR048CYDR048C PRY3P47033 881 aa12.7□□□□□ -0.38
YDR048CYDR048C YCK3P39962 524 aa12□□□□□ -0.49
YDR048CYDR048C MTC1P47018 478 aaKnown RBP11.93□□□□□ -0.5
YDR048CYDR048C HAA1Q12753 694 aaKnown RBP11.78□□□□□ -0.52
YDR048CYDR048C AAD16Q02895 342 aa11.62□□□□□ -0.55
YDR048CYDR048C PRI1P10363 409 aa11.41□□□□□ -0.58
YDR048CYDR048C BUD31P25337 157 aaPredicted RBP10.67□□□□□ -0.7
YDR048CYDR048C TSR3Q12094 313 aaKnown RBP10.64□□□□□ -0.71
YDR048CYDR048C YGL015CP33199 130 aa10.46□□□□□ -0.73
YDR048CYDR048C ISW2Q08773 1120 aa10.39□□□□□ -0.75
YDR048CYDR048C RPG1P38249 964 aaKnown RBP10.36□□□□□ -0.75
YDR048CYDR048C MRPL32P25348 183 aa10.21□□□□□ -0.77
YDR048CYDR048C SIS1P25294 352 aaKnown RBP9.89□□□□□ -0.83
YDR048CYDR048C UBP9P39967 754 aa9.4□□□□□ -0.9
YDR048CYDR048C UBP10P53874 792 aaPredicted RBP9.34□□□□□ -0.91
YDR048CYDR048C CDC27P38042 758 aa9.32□□□□□ -0.92
YDR048CYDR048C MAP2P38174 421 aaKnown RBP9.29□□□□□ -0.92
YDR048CYDR048C TGL3P40308 642 aa8.97□□□□□ -0.97
YDR048CYDR048C TIF4632P39936 914 aaKnown RBP8.96□□□□□ -0.98
YDR048CYDR048C REB1P21538 810 aa8.94□□□□□ -0.98
YDR048CYDR048C RSE1Q04693 1361 aaKnown RBP8.9□□□□□ -0.98
YDR048CYDR048C RPL17AP05740 184 aaKnown RBP8.78□□□□□ -1
YDR048CYDR048C RPL17BP46990 184 aaKnown RBP8.78□□□□□ -1
YDR048CYDR048C DRS1P32892 752 aaKnown RBP8.74□□□□□ -1.01
YDR048CYDR048C YKR023WP36119 530 aaKnown RBP8.71□□□□□ -1.02
YDR048CYDR048C SLX5P32828 619 aaKnown RBP8.69□□□□□ -1.02
YDR048CYDR048C SCY1P53009 804 aa8.67□□□□□ -1.02
YDR048CYDR048C YBL029C-AQ3E756 94 aa8.58□□□□□ -1.04
YDR048CYDR048C DCD1P06773 312 aa8.57□□□□□ -1.04
YDR048CYDR048C DIP2Q12220 943 aaPredicted RBP8.53□□□□□ -1.04
YDR048CYDR048C TFC8Q12308 588 aa8.53□□□□□ -1.04
YDR048CYDR048C HOP09932 586 aa8.52□□□□□ -1.05
YDR048CYDR048C AIR2Q12476 344 aaKnown RBP8.42□□□□□ -1.06
YDR048CYDR048C YJL171CP46992 396 aa8.41□□□□□ -1.06
YDR048CYDR048C VNX1P42839 908 aa8.37□□□□□ -1.07
YDR048CYDR048C MST1P07236 462 aa8.35□□□□□ -1.07
YDR048CYDR048C FKH1P40466 484 aa8.29□□□□□ -1.08
YDR048CYDR048C RGA2Q06407 1009 aa8.29□□□□□ -1.08
YDR048CYDR048C SPT21P35209 758 aa8.27□□□□□ -1.09
YDR048CYDR048C SPP1Q03012 353 aa8.27□□□□□ -1.09
YDR048CYDR048C BCH2P36122 765 aa8.16□□□□□ -1.1
YDR048CYDR048C YOR238WQ08634 303 aa8.16□□□□□ -1.1
YDR048CYDR048C BMT6Q12291 365 aa8.1□□□□□ -1.11
YDR048CYDR048C WSC3Q12215 556 aa8.04□□□□□ -1.12
YDR048CYDR048C TIF11P38912 153 aaKnown RBP8.02□□□□□ -1.13
YDR048CYDR048C LDB19Q12502 818 aa7.93□□□□□ -1.14
YDR048CYDR048C NSR1P27476 414 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
YDR048CYDR048C BDF1P35817 686 aa7.81□□□□□ -1.16
YDR048CYDR048C IOC2Q12072 812 aa7.81□□□□□ -1.16
YDR048CYDR048C EPS1P40557 701 aa7.77□□□□□ -1.17
YDR048CYDR048C YAP5P40574 245 aa7.76□□□□□ -1.17
YDR048CYDR048C ULI1P43604 169 aa7.76□□□□□ -1.17
YDR048CYDR048C RGA1P39083 1007 aa7.73□□□□□ -1.17
YDR048CYDR048C BCK2P33306 851 aa7.66□□□□□ -1.18
YDR048CYDR048C GTT3P39996 337 aa7.65□□□□□ -1.18
YDR048CYDR048C AVT3P36062 692 aa7.57□□□□□ -1.2
YDR048CYDR048C RTG1P32607 177 aa7.54□□□□□ -1.2
YDR048CYDR048C NCR1Q12200 1170 aa7.54□□□□□ -1.2
YDR048CYDR048C RIM101P33400 625 aa7.43□□□□□ -1.22
YDR048CYDR048C EAP1P36041 632 aaKnown RBP7.42□□□□□ -1.22
YDR048CYDR048C MSB4Q12317 492 aa7.4□□□□□ -1.22
YDR048CYDR048C SEC61P32915 480 aa7.39□□□□□ -1.23
YDR048CYDR048C CHL1P22516 861 aaPredicted RBP7.37□□□□□ -1.23
YDR048CYDR048C TRP5P00931 707 aaKnown RBP7.35□□□□□ -1.23
YDR048CYDR048C YNL035CP53962 389 aaKnown RBP7.35□□□□□ -1.23
YDR048CYDR048C XDJ1P39102 459 aa7.33□□□□□ -1.24
YDR048CYDR048C DPS1P04802 557 aaKnown RBP7.29□□□□□ -1.24
YDR048CYDR048C SAP30P38429 201 aa7.29□□□□□ -1.24
YDR048CYDR048C PRE3P38624 215 aa7.26□□□□□ -1.25
YDR048CYDR048C PIB1Q06651 286 aa7.26□□□□□ -1.25
YDR048CYDR048C TFG1P41895 735 aaPredicted RBP7.24□□□□□ -1.25
YDR048CYDR048C SET4P42948 560 aa7.22□□□□□ -1.25
YDR048CYDR048C SRC1Q03707 834 aa7.22□□□□□ -1.25
YDR048CYDR048C YOL036WQ08206 761 aa7.21□□□□□ -1.26
YDR048CYDR048C VRP1P37370 817 aa7.2□□□□□ -1.26
YDR048CYDR048C BBC1P47068 1157 aa7.18□□□□□ -1.26
YDR048CYDR048C BFR2Q06631 534 aaKnown RBP7.17□□□□□ -1.26
YDR048CYDR048C YDL129WQ07555 291 aa7.13□□□□□ -1.27
YDR048CYDR048C OXP1P28273 1286 aa7.12□□□□□ -1.27
YDR048CYDR048C DAN4P47179 1161 aa7.08□□□□□ -1.28
YDR048CYDR048C PTP3P40048 928 aa7.06□□□□□ -1.28
YDR048CYDR048C AI2P03876 854 aa7.03□□□□□ -1.28
YDR048CYDR048C JIP4Q03361 876 aa6.97□□□□□ -1.29
YDR048CYDR048C YIL055CP40523 627 aaKnown RBP6.96□□□□□ -1.3
YDR048CYDR048C YDR344CQ05510 147 aa6.92□□□□□ -1.3
YDR048CYDR048C RSM7P47150 247 aa6.9□□□□□ -1.3
YDR048CYDR048C SAM3Q08986 587 aa6.86□□□□□ -1.31
YDR048CYDR048C YPL062WQ02781 134 aa6.84□□□□□ -1.31
YDR048CYDR048C ELP4Q02884 456 aaKnown RBP6.81□□□□□ -1.32
YDR048CYDR048C VMA1P17255 1071 aaKnown RBP6.8□□□□□ -1.32
YDR048CYDR048C PTC4P38089 393 aa6.75□□□□□ -1.33
YDR048CYDR048C ABP1P15891 592 aaKnown RBP6.71□□□□□ -1.34
YDR048CYDR048C DBP1P24784 617 aaKnown RBP6.71□□□□□ -1.34
YDR048CYDR048C YEL023CP39992 682 aa6.7□□□□□ -1.34
YDR048CYDR048C HTA1P04911 132 aaKnown RBP6.67□□□□□ -1.34
YDR048CYDR048C HTA2P04912 132 aa6.67□□□□□ -1.34
YDR048CYDR048C YMR1P47147 688 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
YDR048CYDR048C YFR006WP43590 535 aa6.66□□□□□ -1.34
YDR048CYDR048C MRM1P25270 412 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms