Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 RPA190YOR341W 4995 nt3.43□□□□□ -1.86
UFD2P54860 MPH1YIR002C 2982 nt3.43□□□□□ -1.86
UFD2P54860 CHS2YBR038W 2892 nt3.42□□□□□ -1.86
UFD2P54860 BAS1YKR099W 2436 nt3.42□□□□□ -1.86
UFD2P54860 ENA5YDR038C 3276 nt3.42□□□□□ -1.86
UFD2P54860 GPG1YGL121C 381 nt3.42□□□□□ -1.86
UFD2P54860 RGM1YMR182C 636 nt3.42□□□□□ -1.86
UFD2P54860 DOT6YER088C 2013 nt3.42□□□□□ -1.86
UFD2P54860 SKP2YNL311C 2292 nt3.42□□□□□ -1.86
UFD2P54860 SPO14YKR031C 5052 nt3.42□□□□□ -1.86
UFD2P54860 NCL1YBL024W 2055 nt3.42□□□□□ -1.86
UFD2P54860 PEX1YKL197C 3132 nt3.41□□□□□ -1.86
UFD2P54860 YDL025W-AYDL025W-A 105 nt3.41□□□□□ -1.86
UFD2P54860 NPC2YDL046W 522 nt3.41□□□□□ -1.86
UFD2P54860 RPL23BYER117W 414 nt3.41□□□□□ -1.86
UFD2P54860 GRX8YLR364W 330 nt3.41□□□□□ -1.86
UFD2P54860 PSY2YNL201C 2577 nt3.41□□□□□ -1.86
UFD2P54860 MVP1YMR004W 1536 nt3.4□□□□□ -1.86
UFD2P54860 AI2Q0055 2565 nt3.4□□□□□ -1.86
UFD2P54860 ORC1YML065W 2745 nt3.4□□□□□ -1.86
UFD2P54860 YDL185C-AYDL185C-A 228 nt3.4□□□□□ -1.87
UFD2P54860 RPL38YLR325C 237 nt3.4□□□□□ -1.87
UFD2P54860 YOR302WYOR302W 78 nt3.4□□□□□ -1.87
UFD2P54860 NAB3YPL190C 2409 nt3.4□□□□□ -1.87
UFD2P54860 YSP2YDR326C 4317 nt3.4□□□□□ -1.87
UFD2P54860 snR60snR60 104 nt3.39□□□□□ -1.87
UFD2P54860 snR76snR76 109 nt3.39□□□□□ -1.87
UFD2P54860 YHL005CYHL005C 393 nt3.39□□□□□ -1.87
UFD2P54860 CYB5YNL111C 363 nt3.39□□□□□ -1.87
UFD2P54860 DFG16YOR030W 1860 nt3.39□□□□□ -1.87
UFD2P54860 SGD1YLR336C 2700 nt3.38□□□□□ -1.87
UFD2P54860 YAK1YJL141C 2424 nt3.38□□□□□ -1.87
UFD2P54860 YER039C-AYER039C-A 219 nt3.38□□□□□ -1.87
UFD2P54860 SQS1YNL224C 2304 nt3.38□□□□□ -1.87
UFD2P54860 DBP10YDL031W 2988 nt3.38□□□□□ -1.87
UFD2P54860 VAS1YGR094W 3315 nt3.37□□□□□ -1.87
UFD2P54860 TAF2YCR042C 4224 nt3.37□□□□□ -1.87
UFD2P54860 DRS2YAL026C 4068 nt3.37□□□□□ -1.87
UFD2P54860 COX14YML129C 213 nt3.37□□□□□ -1.87
UFD2P54860 YNL338WYNL338W 159 nt3.37□□□□□ -1.87
UFD2P54860 PAN3YKL025C 2040 nt3.37□□□□□ -1.87
UFD2P54860 SCW11YGL028C 1629 nt3.37□□□□□ -1.87
UFD2P54860 ECM21YBL101C 3354 nt3.37□□□□□ -1.87
UFD2P54860 STT4YLR305C 5703 nt3.37□□□□□ -1.87
UFD2P54860 SNU114YKL173W 3027 nt3.36□□□□□ -1.87
UFD2P54860 PAU2YEL049W 363 nt3.36□□□□□ -1.87
UFD2P54860 HDA3YPR179C 1968 nt3.36□□□□□ -1.87
UFD2P54860 YGR250CYGR250C 2346 nt3.36□□□□□ -1.87
UFD2P54860 DSE4YNR067C 3354 nt3.35□□□□□ -1.87
UFD2P54860 CSR2YPR030W 3366 nt3.35□□□□□ -1.87
UFD2P54860 TOF2YKR010C 2316 nt3.35□□□□□ -1.87
UFD2P54860 PRE4YFR050C 801 nt3.35□□□□□ -1.87
UFD2P54860 GUP1YGL084C 1683 nt3.35□□□□□ -1.87
UFD2P54860 BCH1YMR237W 2175 nt3.35□□□□□ -1.87
UFD2P54860 BFA1YJR053W 1725 nt3.34□□□□□ -1.87
UFD2P54860 YGL052WYGL052W 306 nt3.34□□□□□ -1.87
UFD2P54860 PCC1YKR095W-A 267 nt3.34□□□□□ -1.87
UFD2P54860 RPL6AYML073C 531 nt3.34□□□□□ -1.87
UFD2P54860 YMR141W-AYMR141W-A 225 nt3.34□□□□□ -1.87
UFD2P54860 VPS35YJL154C 2835 nt3.34□□□□□ -1.87
UFD2P54860 DNL4YOR005C 2835 nt3.34□□□□□ -1.87
UFD2P54860 ILS1YBL076C 3219 nt3.34□□□□□ -1.88
UFD2P54860 FUN30YAL019W 3396 nt3.34□□□□□ -1.88
UFD2P54860 RPN1YHR027C 2982 nt3.33□□□□□ -1.88
UFD2P54860 PTC5YOR090C 1719 nt3.33□□□□□ -1.88
UFD2P54860 ALK2YBL009W 2031 nt3.33□□□□□ -1.88
UFD2P54860 YDL007C-AYDL007C-A 258 nt3.33□□□□□ -1.88
UFD2P54860 YML007C-AYML007C-A 111 nt3.33□□□□□ -1.88
UFD2P54860 YML037CYML037C 1023 nt3.33□□□□□ -1.88
UFD2P54860 UBP11YKR098C 2154 nt3.33□□□□□ -1.88
UFD2P54860 YIL169CYIL169C 2988 nt3.33□□□□□ -1.88
UFD2P54860 TFC1YBR123C 1950 nt3.32□□□□□ -1.88
UFD2P54860 MDM20YOL076W 2391 nt3.32□□□□□ -1.88
UFD2P54860 tF(GAA)QtF(GAA)Q 75 nt3.32□□□□□ -1.88
UFD2P54860 UPS1YLR193C 528 nt3.32□□□□□ -1.88
UFD2P54860 NUT2YPR168W 474 nt3.32□□□□□ -1.88
UFD2P54860 TMN3YER113C 2121 nt3.32□□□□□ -1.88
UFD2P54860 KSP1YHR082C 3090 nt3.32□□□□□ -1.88
UFD2P54860 RGR1YLR071C 3249 nt3.32□□□□□ -1.88
UFD2P54860 YRB1YDR002W 606 nt3.31□□□□□ -1.88
UFD2P54860 YLR154C-HYLR154C-H 132 nt3.31□□□□□ -1.88
UFD2P54860 YLR156C-AYLR156C-A 132 nt3.31□□□□□ -1.88
UFD2P54860 YLR157C-CYLR157C-C 132 nt3.31□□□□□ -1.88
UFD2P54860 YLR159C-AYLR159C-A 132 nt3.31□□□□□ -1.88
UFD2P54860 YNL028WYNL028W 318 nt3.31□□□□□ -1.88
UFD2P54860 MSB2YGR014W 3921 nt3.3□□□□□ -1.88
UFD2P54860 YPR089WYPR089W 2667 nt3.3□□□□□ -1.88
UFD2P54860 RPS12YOR369C 432 nt3.3□□□□□ -1.88
UFD2P54860 PSK1YAL017W 4071 nt3.3□□□□□ -1.88
UFD2P54860 FLO1YAR050W 4614 nt3.3□□□□□ -1.88
UFD2P54860 PMR1YGL167C 2853 nt3.3□□□□□ -1.88
UFD2P54860 YDR426CYDR426C 378 nt3.29□□□□□ -1.88
UFD2P54860 FPR1YNL135C 345 nt3.29□□□□□ -1.88
UFD2P54860 VMA9YCL005W-A 222 nt3.29□□□□□ -1.88
UFD2P54860 NET1YJL076W 3570 nt3.28□□□□□ -1.88
UFD2P54860 HRD3YLR207W 2502 nt3.28□□□□□ -1.88
UFD2P54860 YJL150WYJL150W 303 nt3.28□□□□□ -1.88
UFD2P54860 YLR120W-AYLR120W-A 102 nt3.28□□□□□ -1.88
UFD2P54860 YLR255CYLR255C 354 nt3.28□□□□□ -1.88
UFD2P54860 SNC2YOR327C 348 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 82.1 ms