RNA–Protein interactions for RNA: YDL046W

NPC2, Transcript of Functional homolog of human NPC2/He1, yeastyeast

Gene NPC2, Length 522 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPC2YDL046W MTC1P47018 478 aaKnown RBP8.5□□□□□ -1.05
NPC2YDL046W DRS1P32892 752 aaKnown RBP8.02□□□□□ -1.13
NPC2YDL046W FAP1P53971 965 aa7.6□□□□□ -1.19
NPC2YDL046W PRI1P10363 409 aa7.13□□□□□ -1.27
NPC2YDL046W PRY3P47033 881 aa7.13□□□□□ -1.27
NPC2YDL046W AAD16Q02895 342 aa7.08□□□□□ -1.28
NPC2YDL046W ISW2Q08773 1120 aa7.03□□□□□ -1.28
NPC2YDL046W DIP2Q12220 943 aaPredicted RBP7.01□□□□□ -1.29
NPC2YDL046W RPG1P38249 964 aaKnown RBP6.97□□□□□ -1.29
NPC2YDL046W AVT3P36062 692 aa6.76□□□□□ -1.33
NPC2YDL046W TSR3Q12094 313 aaKnown RBP6.76□□□□□ -1.33
NPC2YDL046W RSE1Q04693 1361 aaKnown RBP6.75□□□□□ -1.33
NPC2YDL046W YCK3P39962 524 aa6.73□□□□□ -1.33
NPC2YDL046W BFR2Q06631 534 aaKnown RBP6.69□□□□□ -1.34
NPC2YDL046W HAA1Q12753 694 aaKnown RBP6.68□□□□□ -1.34
NPC2YDL046W RPL17AP05740 184 aaKnown RBP6.54□□□□□ -1.36
NPC2YDL046W RPL17BP46990 184 aaKnown RBP6.54□□□□□ -1.36
NPC2YDL046W REB1P21538 810 aa6.5□□□□□ -1.37
NPC2YDL046W MRPL32P25348 183 aa6.48□□□□□ -1.37
NPC2YDL046W SPT21P35209 758 aa6.25□□□□□ -1.41
NPC2YDL046W YGL015CP33199 130 aa6.2□□□□□ -1.42
NPC2YDL046W YKR023WP36119 530 aaKnown RBP6.18□□□□□ -1.42
NPC2YDL046W CDC27P38042 758 aa6.18□□□□□ -1.42
NPC2YDL046W HOP09932 586 aa6.06□□□□□ -1.44
NPC2YDL046W RIM101P33400 625 aa6.05□□□□□ -1.44
NPC2YDL046W TFC8Q12308 588 aa6.05□□□□□ -1.44
NPC2YDL046W DCD1P06773 312 aa6.04□□□□□ -1.44
NPC2YDL046W MAP2P38174 421 aaKnown RBP5.98□□□□□ -1.45
NPC2YDL046W UBP10P53874 792 aaPredicted RBP5.97□□□□□ -1.45
NPC2YDL046W TFA1P36100 482 aa5.92□□□□□ -1.46
NPC2YDL046W SCY1P53009 804 aa5.87□□□□□ -1.47
NPC2YDL046W OXP1P28273 1286 aa5.86□□□□□ -1.47
NPC2YDL046W BCH2P36122 765 aa5.86□□□□□ -1.47
NPC2YDL046W SLX5P32828 619 aaKnown RBP5.78□□□□□ -1.48
NPC2YDL046W PTP3P40048 928 aa5.77□□□□□ -1.49
NPC2YDL046W YIL055CP40523 627 aaKnown RBP5.77□□□□□ -1.49
NPC2YDL046W TIF4632P39936 914 aaKnown RBP5.74□□□□□ -1.49
NPC2YDL046W TGL3P40308 642 aa5.71□□□□□ -1.5
NPC2YDL046W EPS1P40557 701 aa5.71□□□□□ -1.5
NPC2YDL046W YAH1Q12184 172 aaKnown RBP5.7□□□□□ -1.5
NPC2YDL046W BDF1P35817 686 aa5.69□□□□□ -1.5
NPC2YDL046W RSM7P47150 247 aa5.68□□□□□ -1.5
NPC2YDL046W BUD31P25337 157 aaPredicted RBP5.64□□□□□ -1.51
NPC2YDL046W AI2P03876 854 aa5.63□□□□□ -1.51
NPC2YDL046W BBC1P47068 1157 aa5.62□□□□□ -1.51
NPC2YDL046W YLR271WQ06152 274 aa5.6□□□□□ -1.51
NPC2YDL046W SSP1P38871 571 aa5.54□□□□□ -1.52
NPC2YDL046W UBP9P39967 754 aa5.52□□□□□ -1.53
NPC2YDL046W PSD2P53037 1138 aaKnown RBP5.5□□□□□ -1.53
NPC2YDL046W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
NPC2YDL046W MST1P07236 462 aa5.47□□□□□ -1.53
NPC2YDL046W YOR238WQ08634 303 aa5.47□□□□□ -1.53
NPC2YDL046W NSR1P27476 414 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
NPC2YDL046W YAP5P40574 245 aa5.44□□□□□ -1.54
NPC2YDL046W MRM1P25270 412 aa5.43□□□□□ -1.54
NPC2YDL046W CST9Q06032 482 aa5.41□□□□□ -1.54
NPC2YDL046W MGA2P40578 1113 aa5.4□□□□□ -1.54
NPC2YDL046W SIS1P25294 352 aaKnown RBP5.39□□□□□ -1.55
NPC2YDL046W YBL029C-AQ3E756 94 aa5.39□□□□□ -1.55
NPC2YDL046W PIB1Q06651 286 aa5.35□□□□□ -1.55
NPC2YDL046W VNX1P42839 908 aa5.33□□□□□ -1.56
NPC2YDL046W WSC3Q12215 556 aa5.33□□□□□ -1.56
NPC2YDL046W RTG3P38165 486 aa5.32□□□□□ -1.56
NPC2YDL046W GTT3P39996 337 aa5.32□□□□□ -1.56
NPC2YDL046W VPS29P38759 282 aa5.3□□□□□ -1.56
NPC2YDL046W RCR1P38212 213 aa5.29□□□□□ -1.56
NPC2YDL046W YMR1P47147 688 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
NPC2YDL046W SPP1Q03012 353 aa5.29□□□□□ -1.56
NPC2YDL046W DBP1P24784 617 aaKnown RBP5.27□□□□□ -1.57
NPC2YDL046W YFR006WP43590 535 aa5.26□□□□□ -1.57
NPC2YDL046W STS1P38637 319 aa5.25□□□□□ -1.57
NPC2YDL046W TIF11P38912 153 aaKnown RBP5.24□□□□□ -1.57
NPC2YDL046W VMA1P17255 1071 aaKnown RBP5.2□□□□□ -1.58
NPC2YDL046W ULI1P43604 169 aa5.19□□□□□ -1.58
NPC2YDL046W SET4P42948 560 aa5.18□□□□□ -1.58
NPC2YDL046W YOL036WQ08206 761 aa5.18□□□□□ -1.58
NPC2YDL046W MSB4Q12317 492 aa5.18□□□□□ -1.58
NPC2YDL046W IOC2Q12072 812 aa5.17□□□□□ -1.58
NPC2YDL046W LDB19Q12502 818 aa5.16□□□□□ -1.58
NPC2YDL046W EAP1P36041 632 aaKnown RBP5.15□□□□□ -1.59
NPC2YDL046W SAM3Q08986 587 aa5.15□□□□□ -1.59
NPC2YDL046W FKH1P40466 484 aa5.14□□□□□ -1.59
NPC2YDL046W AIR2Q12476 344 aaKnown RBP5.14□□□□□ -1.59
NPC2YDL046W TRP5P00931 707 aaKnown RBP5.13□□□□□ -1.59
NPC2YDL046W RAM2P29703 316 aa5.13□□□□□ -1.59
NPC2YDL046W MAK11P20484 414 aaKnown RBP5.1□□□□□ -1.59
NPC2YDL046W YJL171CP46992 396 aa5.1□□□□□ -1.59
NPC2YDL046W GYP5Q12344 894 aa5.1□□□□□ -1.59
NPC2YDL046W RTG1P32607 177 aa5.09□□□□□ -1.59
NPC2YDL046W MIF2P35201 549 aa5.08□□□□□ -1.6
NPC2YDL046W DCW1P36091 449 aa5.07□□□□□ -1.6
NPC2YDL046W YNL035CP53962 389 aaKnown RBP5.06□□□□□ -1.6
NPC2YDL046W HTA1P04911 132 aaKnown RBP5.05□□□□□ -1.6
NPC2YDL046W HTA2P04912 132 aa5.05□□□□□ -1.6
NPC2YDL046W ABP1P15891 592 aaKnown RBP5.05□□□□□ -1.6
NPC2YDL046W EDS1P38073 919 aa5.05□□□□□ -1.6
NPC2YDL046W NCR1Q12200 1170 aa5.05□□□□□ -1.6
NPC2YDL046W COQ8P27697 501 aa5.04□□□□□ -1.6
NPC2YDL046W BMT6Q12291 365 aa5.04□□□□□ -1.6
NPC2YDL046W SEC61P32915 480 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms