Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 PTC5YOR090C 1719 nt1.8□□□□□ -2.12
SHE3P38272 NCL1YBL024W 2055 nt1.8□□□□□ -2.12
SHE3P38272 YCR001WYCR001W 315 nt1.8□□□□□ -2.12
SHE3P38272 YFR056CYFR056C 369 nt1.8□□□□□ -2.12
SHE3P38272 YGL024WYGL024W 336 nt1.8□□□□□ -2.12
SHE3P38272 NOP10YHR072W-A 177 nt1.8□□□□□ -2.12
SHE3P38272 ASM4YDL088C 1587 nt1.8□□□□□ -2.12
SHE3P38272 IPT1YDR072C 1584 nt1.8□□□□□ -2.12
SHE3P38272 CFT1YDR301W 4074 nt1.8□□□□□ -2.12
SHE3P38272 YDL068WYDL068W 330 nt1.79□□□□□ -2.12
SHE3P38272 SDC1YDR469W 528 nt1.79□□□□□ -2.12
SHE3P38272 YHR130CYHR130C 336 nt1.79□□□□□ -2.12
SHE3P38272 YLR171WYLR171W 390 nt1.79□□□□□ -2.12
SHE3P38272 SYM1YLR251W 594 nt1.79□□□□□ -2.12
SHE3P38272 RUF22RUF22 515 nt1.79□□□□□ -2.12
SHE3P38272 CDC33YOL139C 642 nt1.79□□□□□ -2.12
SHE3P38272 EGD1YPL037C 474 nt1.79□□□□□ -2.12
SHE3P38272 NAN1YPL126W 2691 nt1.79□□□□□ -2.12
SHE3P38272 VPS52YDR484W 1926 nt1.78□□□□□ -2.12
SHE3P38272 VPS15YBR097W 4365 nt1.78□□□□□ -2.12
SHE3P38272 FMP16YDR070C 282 nt1.78□□□□□ -2.12
SHE3P38272 YDR509WYDR509W 348 nt1.78□□□□□ -2.12
SHE3P38272 YER188C-AYER188C-A 300 nt1.78□□□□□ -2.12
SHE3P38272 LSO2YGR169C-A 279 nt1.78□□□□□ -2.12
SHE3P38272 BIG1YHR101C 1008 nt1.78□□□□□ -2.12
SHE3P38272 tT(UGU)Q1tT(UGU)Q1 76 nt1.78□□□□□ -2.12
SHE3P38272 YML108WYML108W 318 nt1.78□□□□□ -2.12
SHE3P38272 SEN15YMR059W 387 nt1.78□□□□□ -2.12
SHE3P38272 RPB5YBR154C 648 nt1.78□□□□□ -2.12
SHE3P38272 PDR8YLR266C 2106 nt1.78□□□□□ -2.13
SHE3P38272 PPN1YDR452W 2025 nt1.78□□□□□ -2.13
SHE3P38272 MZM1YDR493W 372 nt1.77□□□□□ -2.13
SHE3P38272 TMA7YLR262C-A 195 nt1.77□□□□□ -2.13
SHE3P38272 YMR052C-AYMR052C-A 366 nt1.77□□□□□ -2.13
SHE3P38272 RTC6YPL183W-A 282 nt1.77□□□□□ -2.13
SHE3P38272 IRC10YOL015W 1761 nt1.77□□□□□ -2.13
SHE3P38272 ATG9YDL149W 2994 nt1.77□□□□□ -2.13
SHE3P38272 YEL043WYEL043W 2871 nt1.77□□□□□ -2.13
SHE3P38272 GRX8YLR364W 330 nt1.76□□□□□ -2.13
SHE3P38272 YOR248WYOR248W 303 nt1.76□□□□□ -2.13
SHE3P38272 DFG16YOR030W 1860 nt1.75□□□□□ -2.13
SHE3P38272 CDC50YCR094W 1176 nt1.75□□□□□ -2.13
SHE3P38272 YDL041WYDL041W 354 nt1.75□□□□□ -2.13
SHE3P38272 SMD1YGR074W 441 nt1.75□□□□□ -2.13
SHE3P38272 VOA1YGR106C 798 nt1.75□□□□□ -2.13
SHE3P38272 TEN1YLR010C 483 nt1.75□□□□□ -2.13
SHE3P38272 VTI1YMR197C 654 nt1.75□□□□□ -2.13
SHE3P38272 TIF11YMR260C 462 nt1.75□□□□□ -2.13
SHE3P38272 ROX1YPR065W 1107 nt1.75□□□□□ -2.13
SHE3P38272 MGA2YIR033W 3342 nt1.75□□□□□ -2.13
SHE3P38272 RTP1YMR185W 2946 nt1.75□□□□□ -2.13
SHE3P38272 VPS8YAL002W 3825 nt1.75□□□□□ -2.13
SHE3P38272 LRE1YCL051W 1752 nt1.75□□□□□ -2.13
SHE3P38272 VAR1Q0140 1197 nt1.74□□□□□ -2.13
SHE3P38272 YGR025WYGR025W 303 nt1.74□□□□□ -2.13
SHE3P38272 YNL010WYNL010W 726 nt1.74□□□□□ -2.13
SHE3P38272 TSC3YBR058C-A 243 nt1.74□□□□□ -2.13
SHE3P38272 YPL205CYPL205C 345 nt1.74□□□□□ -2.13
SHE3P38272 YPR039WYPR039W 336 nt1.74□□□□□ -2.13
SHE3P38272 SLM6YBR266C 453 nt1.74□□□□□ -2.13
SHE3P38272 snR79snR79 84 nt1.73□□□□□ -2.13
SHE3P38272 YHL037CYHL037C 402 nt1.73□□□□□ -2.13
SHE3P38272 CRG1YHR209W 876 nt1.73□□□□□ -2.13
SHE3P38272 COA6YMR244C-A 315 nt1.73□□□□□ -2.13
SHE3P38272 CMC2YBL059C-A 330 nt1.73□□□□□ -2.13
SHE3P38272 YOR394C-AYOR394C-A 168 nt1.73□□□□□ -2.13
SHE3P38272 YPR177CYPR177C 372 nt1.73□□□□□ -2.13
SHE3P38272 YLR422WYLR422W 5799 nt1.73□□□□□ -2.13
SHE3P38272 SWT1YOR166C 1377 nt1.72□□□□□ -2.13
SHE3P38272 LYS9YNR050C 1341 nt1.72□□□□□ -2.13
SHE3P38272 YBR012W-AYBR012W-A 1323 nt1.72□□□□□ -2.13
SHE3P38272 YOR142W-AYOR142W-A 1323 nt1.72□□□□□ -2.13
SHE3P38272 YPR158W-AYPR158W-A 1323 nt1.72□□□□□ -2.13
SHE3P38272 HOP2YGL033W 657 nt1.72□□□□□ -2.13
SHE3P38272 HUR1YGL168W 333 nt1.72□□□□□ -2.13
SHE3P38272 ECL1YGR146C 636 nt1.72□□□□□ -2.13
SHE3P38272 NBL1YHR199C-A 222 nt1.72□□□□□ -2.13
SHE3P38272 YHR210CYHR210C 1026 nt1.72□□□□□ -2.13
SHE3P38272 YLR222C-AYLR222C-A 231 nt1.72□□□□□ -2.13
SHE3P38272 SEC22YLR268W 645 nt1.72□□□□□ -2.13
SHE3P38272 YMR153C-AYMR153C-A 336 nt1.72□□□□□ -2.13
SHE3P38272 YOR146WYOR146W 306 nt1.72□□□□□ -2.13
SHE3P38272 MEC1YBR136W 7107 nt1.72□□□□□ -2.13
SHE3P38272 RTT101YJL047C 2529 nt1.71□□□□□ -2.14
SHE3P38272 KAR3YPR141C 2190 nt1.71□□□□□ -2.14
SHE3P38272 RUD3YOR216C 1455 nt1.71□□□□□ -2.14
SHE3P38272 HMLALPHA2YCL067C 633 nt1.71□□□□□ -2.14
SHE3P38272 MATALPHA2YCR039C 633 nt1.71□□□□□ -2.14
SHE3P38272 YHR125WYHR125W 306 nt1.71□□□□□ -2.14
SHE3P38272 YJL007CYJL007C 315 nt1.71□□□□□ -2.14
SHE3P38272 snR13snR13 124 nt1.71□□□□□ -2.14
SHE3P38272 YBR076C-AYBR076C-A 267 nt1.71□□□□□ -2.14
SHE3P38272 SPO22YIL073C 2928 nt1.71□□□□□ -2.14
SHE3P38272 BUD2YKL092C 3315 nt1.71□□□□□ -2.14
SHE3P38272 CHS1YNL192W 3396 nt1.7□□□□□ -2.14
SHE3P38272 COX1Q0045 1605 nt1.7□□□□□ -2.14
SHE3P38272 YNL144CYNL144C 2223 nt1.7□□□□□ -2.14
SHE3P38272 RBK1YCR036W 1002 nt1.7□□□□□ -2.14
SHE3P38272 tT(UGU)HtT(UGU)H 72 nt1.7□□□□□ -2.14
SHE3P38272 YLR101CYLR101C 396 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms