RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W MTC1P47018 478 aaKnown RBP14.23□□□□□ -0.13
SDC1YDR469W FAP1P53971 965 aa13.64□□□□□ -0.23
SDC1YDR469W PRY3P47033 881 aa12.84□□□□□ -0.35
SDC1YDR469W DRS1P32892 752 aaKnown RBP12.64□□□□□ -0.39
SDC1YDR469W AAD16Q02895 342 aa12.4□□□□□ -0.42
SDC1YDR469W PRI1P10363 409 aa12.39□□□□□ -0.43
SDC1YDR469W YCK3P39962 524 aa12.09□□□□□ -0.47
SDC1YDR469W HAA1Q12753 694 aaKnown RBP11.95□□□□□ -0.5
SDC1YDR469W ISW2Q08773 1120 aa11.94□□□□□ -0.5
SDC1YDR469W RPG1P38249 964 aaKnown RBP11.88□□□□□ -0.51
SDC1YDR469W TSR3Q12094 313 aaKnown RBP11.72□□□□□ -0.53
SDC1YDR469W DIP2Q12220 943 aaPredicted RBP11.32□□□□□ -0.6
SDC1YDR469W MRPL32P25348 183 aa11.22□□□□□ -0.61
SDC1YDR469W RSE1Q04693 1361 aaKnown RBP11.12□□□□□ -0.63
SDC1YDR469W YGL015CP33199 130 aa10.93□□□□□ -0.66
SDC1YDR469W REB1P21538 810 aa10.85□□□□□ -0.67
SDC1YDR469W RPL17AP05740 184 aaKnown RBP10.84□□□□□ -0.67
SDC1YDR469W RPL17BP46990 184 aaKnown RBP10.84□□□□□ -0.67
SDC1YDR469W AVT3P36062 692 aa10.7□□□□□ -0.7
SDC1YDR469W CDC27P38042 758 aa10.56□□□□□ -0.72
SDC1YDR469W YKR023WP36119 530 aaKnown RBP10.36□□□□□ -0.75
SDC1YDR469W BUD31P25337 157 aaPredicted RBP10.32□□□□□ -0.76
SDC1YDR469W MAP2P38174 421 aaKnown RBP10.31□□□□□ -0.76
SDC1YDR469W SPT21P35209 758 aa10.29□□□□□ -0.76
SDC1YDR469W UBP10P53874 792 aaPredicted RBP10.29□□□□□ -0.76
SDC1YDR469W HOP09932 586 aa10.18□□□□□ -0.78
SDC1YDR469W BFR2Q06631 534 aaKnown RBP10.18□□□□□ -0.78
SDC1YDR469W DCD1P06773 312 aa10.17□□□□□ -0.78
SDC1YDR469W TFC8Q12308 588 aa10.13□□□□□ -0.79
SDC1YDR469W SCY1P53009 804 aa9.98□□□□□ -0.81
SDC1YDR469W TIF4632P39936 914 aaKnown RBP9.88□□□□□ -0.83
SDC1YDR469W SLX5P32828 619 aaKnown RBP9.87□□□□□ -0.83
SDC1YDR469W TGL3P40308 642 aa9.84□□□□□ -0.83
SDC1YDR469W SIS1P25294 352 aaKnown RBP9.78□□□□□ -0.84
SDC1YDR469W BCH2P36122 765 aa9.78□□□□□ -0.84
SDC1YDR469W RIM101P33400 625 aa9.77□□□□□ -0.85
SDC1YDR469W UBP9P39967 754 aa9.75□□□□□ -0.85
SDC1YDR469W EPS1P40557 701 aa9.49□□□□□ -0.89
SDC1YDR469W BDF1P35817 686 aa9.47□□□□□ -0.89
SDC1YDR469W OXP1P28273 1286 aa9.45□□□□□ -0.9
SDC1YDR469W YBL029C-AQ3E756 94 aa9.36□□□□□ -0.91
SDC1YDR469W PTP3P40048 928 aa9.34□□□□□ -0.91
SDC1YDR469W MST1P07236 462 aa9.33□□□□□ -0.92
SDC1YDR469W YIL055CP40523 627 aaKnown RBP9.31□□□□□ -0.92
SDC1YDR469W YOR238WQ08634 303 aa9.31□□□□□ -0.92
SDC1YDR469W VNX1P42839 908 aa9.2□□□□□ -0.94
SDC1YDR469W BBC1P47068 1157 aa9.18□□□□□ -0.94
SDC1YDR469W NSR1P27476 414 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
SDC1YDR469W RSM7P47150 247 aa9.16□□□□□ -0.94
SDC1YDR469W AI2P03876 854 aa9.14□□□□□ -0.95
SDC1YDR469W YAP5P40574 245 aa9.14□□□□□ -0.95
SDC1YDR469W SPP1Q03012 353 aa9.13□□□□□ -0.95
SDC1YDR469W WSC3Q12215 556 aa9.13□□□□□ -0.95
SDC1YDR469W YAH1Q12184 172 aaKnown RBP9.11□□□□□ -0.95
SDC1YDR469W TIF11P38912 153 aaKnown RBP8.98□□□□□ -0.97
SDC1YDR469W GTT3P39996 337 aa8.98□□□□□ -0.97
SDC1YDR469W AIR2Q12476 344 aaKnown RBP8.98□□□□□ -0.97
SDC1YDR469W FKH1P40466 484 aa8.94□□□□□ -0.98
SDC1YDR469W YJL171CP46992 396 aa8.94□□□□□ -0.98
SDC1YDR469W PIB1Q06651 286 aa8.91□□□□□ -0.98
SDC1YDR469W YLR271WQ06152 274 aa8.9□□□□□ -0.98
SDC1YDR469W LDB19Q12502 818 aa8.87□□□□□ -0.99
SDC1YDR469W ULI1P43604 169 aa8.85□□□□□ -0.99
SDC1YDR469W PSD2P53037 1138 aaKnown RBP8.83□□□□□ -1
SDC1YDR469W IOC2Q12072 812 aa8.82□□□□□ -1
SDC1YDR469W MRM1P25270 412 aa8.79□□□□□ -1
SDC1YDR469W BMT6Q12291 365 aa8.76□□□□□ -1.01
SDC1YDR469W MSB4Q12317 492 aa8.69□□□□□ -1.02
SDC1YDR469W SET4P42948 560 aa8.67□□□□□ -1.02
SDC1YDR469W EAP1P36041 632 aaKnown RBP8.66□□□□□ -1.02
SDC1YDR469W TFA1P36100 482 aa8.66□□□□□ -1.02
SDC1YDR469W YOL036WQ08206 761 aa8.66□□□□□ -1.02
SDC1YDR469W RTG1P32607 177 aa8.65□□□□□ -1.02
SDC1YDR469W TRP5P00931 707 aaKnown RBP8.63□□□□□ -1.03
SDC1YDR469W DBP1P24784 617 aaKnown RBP8.61□□□□□ -1.03
SDC1YDR469W YFR006WP43590 535 aa8.61□□□□□ -1.03
SDC1YDR469W YMR1P47147 688 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
SDC1YDR469W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
SDC1YDR469W VPS29P38759 282 aa8.59□□□□□ -1.03
SDC1YDR469W SSP1P38871 571 aa8.59□□□□□ -1.03
SDC1YDR469W NCR1Q12200 1170 aa8.59□□□□□ -1.03
SDC1YDR469W CST9Q06032 482 aa8.56□□□□□ -1.04
SDC1YDR469W VMA1P17255 1071 aaKnown RBP8.54□□□□□ -1.04
SDC1YDR469W YNL035CP53962 389 aaKnown RBP8.54□□□□□ -1.04
SDC1YDR469W STS1P38637 319 aa8.53□□□□□ -1.04
SDC1YDR469W RTG3P38165 486 aa8.52□□□□□ -1.05
SDC1YDR469W SEC61P32915 480 aa8.5□□□□□ -1.05
SDC1YDR469W SAM3Q08986 587 aa8.48□□□□□ -1.05
SDC1YDR469W MGA2P40578 1113 aa8.45□□□□□ -1.06
SDC1YDR469W RCR1P38212 213 aa8.43□□□□□ -1.06
SDC1YDR469W TFG1P41895 735 aaPredicted RBP8.42□□□□□ -1.06
SDC1YDR469W SAP30P38429 201 aa8.41□□□□□ -1.06
SDC1YDR469W DAN4P47179 1161 aa8.39□□□□□ -1.07
SDC1YDR469W GYP5Q12344 894 aa8.36□□□□□ -1.07
SDC1YDR469W JIP4Q03361 876 aa8.35□□□□□ -1.07
SDC1YDR469W DCW1P36091 449 aa8.33□□□□□ -1.08
SDC1YDR469W YDL129WQ07555 291 aa8.32□□□□□ -1.08
SDC1YDR469W HTA1P04911 132 aaKnown RBP8.31□□□□□ -1.08
SDC1YDR469W HTA2P04912 132 aa8.31□□□□□ -1.08
SDC1YDR469W ABP1P15891 592 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms