Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 TEN1YLR010C 483 nt2.59□□□□□ -1.99
VPS4P52917 YLR154W-FYLR154W-F 141 nt2.59□□□□□ -1.99
VPS4P52917 TSC3YBR058C-A 243 nt2.59□□□□□ -1.99
VPS4P52917 SAP190YKR028W 3102 nt2.59□□□□□ -2
VPS4P52917 SVL3YPL032C 2478 nt2.59□□□□□ -2
VPS4P52917 SCD5YOR329C 2619 nt2.58□□□□□ -2
VPS4P52917 YRB1YDR002W 606 nt2.58□□□□□ -2
VPS4P52917 GCN4YEL009C 846 nt2.58□□□□□ -2
VPS4P52917 YLR458WYLR458W 381 nt2.58□□□□□ -2
VPS4P52917 AIM32YML050W 936 nt2.58□□□□□ -2
VPS4P52917 SEN15YMR059W 387 nt2.58□□□□□ -2
VPS4P52917 CRS5YOR031W 210 nt2.58□□□□□ -2
VPS4P52917 MSS18YPR134W 807 nt2.58□□□□□ -2
VPS4P52917 KSP1YHR082C 3090 nt2.58□□□□□ -2
VPS4P52917 TRA1YHR099W 11235 nt2.58□□□□□ -2
VPS4P52917 CLN3YAL040C 1743 nt2.57□□□□□ -2
VPS4P52917 YIL080WYIL080W 4722 nt2.57□□□□□ -2
VPS4P52917 PES4YFR023W 1836 nt2.57□□□□□ -2
VPS4P52917 YER188C-AYER188C-A 300 nt2.57□□□□□ -2
VPS4P52917 YJL202CYJL202C 348 nt2.57□□□□□ -2
VPS4P52917 RPS22BYLR367W 393 nt2.57□□□□□ -2
VPS4P52917 CDC33YOL139C 642 nt2.57□□□□□ -2
VPS4P52917 VMA9YCL005W-A 222 nt2.57□□□□□ -2
VPS4P52917 TOR1YJR066W 7413 nt2.57□□□□□ -2
VPS4P52917 PRP6YBR055C 2700 nt2.57□□□□□ -2
VPS4P52917 RRP12YPL012W 3687 nt2.56□□□□□ -2
VPS4P52917 IRC8YJL051W 2469 nt2.56□□□□□ -2
VPS4P52917 YDR194W-AYDR194W-A 153 nt2.56□□□□□ -2
VPS4P52917 YER135CYER135C 393 nt2.56□□□□□ -2
VPS4P52917 tT(UGU)Q1tT(UGU)Q1 76 nt2.56□□□□□ -2
VPS4P52917 RPL40AYIL148W 387 nt2.56□□□□□ -2
VPS4P52917 IRC19YLL033W 693 nt2.56□□□□□ -2
VPS4P52917 YLR031WYLR031W 561 nt2.56□□□□□ -2
VPS4P52917 NUP82YJL061W 2142 nt2.56□□□□□ -2
VPS4P52917 UBP2YOR124C 3819 nt2.55□□□□□ -2
VPS4P52917 YDL068WYDL068W 330 nt2.55□□□□□ -2
VPS4P52917 YHR214W-AYHR214W-A 486 nt2.55□□□□□ -2
VPS4P52917 NCE101YJL205C 162 nt2.55□□□□□ -2
VPS4P52917 YAR068WYAR068W 486 nt2.55□□□□□ -2
VPS4P52917 YBR032WYBR032W 303 nt2.55□□□□□ -2
VPS4P52917 YPR039WYPR039W 336 nt2.55□□□□□ -2
VPS4P52917 SPO23YBR250W 1572 nt2.55□□□□□ -2
VPS4P52917 KIP1YBL063W 3336 nt2.55□□□□□ -2
VPS4P52917 ALK2YBL009W 2031 nt2.54□□□□□ -2
VPS4P52917 AMS1YGL156W 3252 nt2.54□□□□□ -2
VPS4P52917 YDR157WYDR157W 402 nt2.54□□□□□ -2
VPS4P52917 BTT1YDR252W 450 nt2.54□□□□□ -2
VPS4P52917 YGR025WYGR025W 303 nt2.54□□□□□ -2
VPS4P52917 YGR050CYGR050C 357 nt2.54□□□□□ -2
VPS4P52917 HRD3YLR207W 2502 nt2.54□□□□□ -2
VPS4P52917 YJL016WYJL016W 1686 nt2.53□□□□□ -2
VPS4P52917 RGA2YDR379W 3030 nt2.53□□□□□ -2
VPS4P52917 IES5YER092W 378 nt2.53□□□□□ -2
VPS4P52917 CRG1YHR209W 876 nt2.53□□□□□ -2
VPS4P52917 YMR001C-AYMR001C-A 231 nt2.53□□□□□ -2
VPS4P52917 snR13snR13 124 nt2.53□□□□□ -2
VPS4P52917 MCD1YDL003W 1701 nt2.53□□□□□ -2
VPS4P52917 HOS4YIL112W 3252 nt2.52□□□□□ -2.01
VPS4P52917 UTP22YGR090W 3714 nt2.52□□□□□ -2.01
VPS4P52917 ACB1YGR037C 264 nt2.52□□□□□ -2.01
VPS4P52917 YHR139C-AYHR139C-A 312 nt2.52□□□□□ -2.01
VPS4P52917 YLR154W-EYLR154W-E 204 nt2.52□□□□□ -2.01
VPS4P52917 COX7YMR256C 183 nt2.52□□□□□ -2.01
VPS4P52917 LEE1YPL054W 906 nt2.52□□□□□ -2.01
VPS4P52917 ELG1YOR144C 2376 nt2.52□□□□□ -2.01
VPS4P52917 PEX8YGR077C 1770 nt2.51□□□□□ -2.01
VPS4P52917 YDR118W-AYDR118W-A 117 nt2.51□□□□□ -2.01
VPS4P52917 ATP17YDR377W 306 nt2.51□□□□□ -2.01
VPS4P52917 YGL014C-AYGL014C-A 162 nt2.51□□□□□ -2.01
VPS4P52917 INP51YIL002C 2841 nt2.5□□□□□ -2.01
VPS4P52917 NIC96YFR002W 2520 nt2.5□□□□□ -2.01
VPS4P52917 SNU114YKL173W 3027 nt2.5□□□□□ -2.01
VPS4P52917 UBP11YKR098C 2154 nt2.5□□□□□ -2.01
VPS4P52917 VPS16YPL045W 2397 nt2.5□□□□□ -2.01
VPS4P52917 VPS52YDR484W 1926 nt2.5□□□□□ -2.01
VPS4P52917 PTC5YOR090C 1719 nt2.49□□□□□ -2.01
VPS4P52917 snR56snR56 88 nt2.49□□□□□ -2.01
VPS4P52917 YDL025W-AYDL025W-A 105 nt2.49□□□□□ -2.01
VPS4P52917 RRF1YHR038W 693 nt2.49□□□□□ -2.01
VPS4P52917 REV1YOR346W 2958 nt2.49□□□□□ -2.01
VPS4P52917 SEC16YPL085W 6588 nt2.49□□□□□ -2.01
VPS4P52917 HSC82YMR186W 2118 nt2.48□□□□□ -2.01
VPS4P52917 AFI1YOR129C 2682 nt2.48□□□□□ -2.01
VPS4P52917 MZM1YDR493W 372 nt2.48□□□□□ -2.01
VPS4P52917 YER068C-AYER068C-A 432 nt2.48□□□□□ -2.01
VPS4P52917 YER079WYER079W 633 nt2.48□□□□□ -2.01
VPS4P52917 PET191YJR034W 327 nt2.48□□□□□ -2.01
VPS4P52917 LSM7YNL147W 348 nt2.48□□□□□ -2.01
VPS4P52917 YBR277CYBR277C 402 nt2.48□□□□□ -2.01
VPS4P52917 PRK1YIL095W 2433 nt2.48□□□□□ -2.01
VPS4P52917 NCL1YBL024W 2055 nt2.48□□□□□ -2.01
VPS4P52917 SAC3YDR159W 3906 nt2.48□□□□□ -2.01
VPS4P52917 STH1YIL126W 4080 nt2.47□□□□□ -2.01
VPS4P52917 YNL018CYNL018C 1839 nt2.47□□□□□ -2.01
VPS4P52917 NOP14YDL148C 2433 nt2.47□□□□□ -2.01
VPS4P52917 YDL041WYDL041W 354 nt2.47□□□□□ -2.01
VPS4P52917 YDR269CYDR269C 324 nt2.47□□□□□ -2.01
VPS4P52917 YFR056CYFR056C 369 nt2.47□□□□□ -2.01
VPS4P52917 SHE2YKL130C 741 nt2.47□□□□□ -2.01
VPS4P52917 YML084WYML084W 309 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 58.1 ms