Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 YDL025W-AYDL025W-A 105 nt3.61□□□□□ -1.83
SSF1P38789 MBB1YJL199C 327 nt3.61□□□□□ -1.83
SSF1P38789 MCM22YJR135C 720 nt3.61□□□□□ -1.83
SSF1P38789 YPR010C-AYPR010C-A 219 nt3.61□□□□□ -1.83
SSF1P38789 YBR085C-AYBR085C-A 258 nt3.61□□□□□ -1.83
SSF1P38789 GCD6YDR211W 2139 nt3.6□□□□□ -1.83
SSF1P38789 GCN4YEL009C 846 nt3.6□□□□□ -1.83
SSF1P38789 TIM13YGR181W 318 nt3.6□□□□□ -1.83
SSF1P38789 YME2YMR302C 2553 nt3.6□□□□□ -1.83
SSF1P38789 DUG2YBR281C 2637 nt3.6□□□□□ -1.83
SSF1P38789 NCL1YBL024W 2055 nt3.59□□□□□ -1.83
SSF1P38789 YSP2YDR326C 4317 nt3.59□□□□□ -1.83
SSF1P38789 PTC5YOR090C 1719 nt3.59□□□□□ -1.83
SSF1P38789 RLI1YDR091C 1827 nt3.59□□□□□ -1.83
SSF1P38789 YGL024WYGL024W 336 nt3.59□□□□□ -1.83
SSF1P38789 LSO2YGR169C-A 279 nt3.59□□□□□ -1.83
SSF1P38789 RPL14BYHL001W 417 nt3.59□□□□□ -1.83
SSF1P38789 SKP2YNL311C 2292 nt3.59□□□□□ -1.84
SSF1P38789 IPT1YDR072C 1584 nt3.59□□□□□ -1.84
SSF1P38789 SGO1YOR073W 1773 nt3.58□□□□□ -1.84
SSF1P38789 PRP6YBR055C 2700 nt3.58□□□□□ -1.84
SSF1P38789 FRE2YKL220C 2136 nt3.58□□□□□ -1.84
SSF1P38789 YPL216WYPL216W 3309 nt3.58□□□□□ -1.84
SSF1P38789 YEL057CYEL057C 702 nt3.58□□□□□ -1.84
SSF1P38789 YHL005CYHL005C 393 nt3.58□□□□□ -1.84
SSF1P38789 RSN1YMR266W 2862 nt3.58□□□□□ -1.84
SSF1P38789 GCV2YMR189W 3105 nt3.58□□□□□ -1.84
SSF1P38789 NMD2YHR077C 3270 nt3.58□□□□□ -1.84
SSF1P38789 UBP11YKR098C 2154 nt3.57□□□□□ -1.84
SSF1P38789 YOR050CYOR050C 348 nt3.57□□□□□ -1.84
SSF1P38789 MPH1YIR002C 2982 nt3.57□□□□□ -1.84
SSF1P38789 HEH2YDR458C 1992 nt3.56□□□□□ -1.84
SSF1P38789 FLO1YAR050W 4614 nt3.56□□□□□ -1.84
SSF1P38789 JIP5YPR169W 1479 nt3.56□□□□□ -1.84
SSF1P38789 YJL070CYJL070C 2667 nt3.56□□□□□ -1.84
SSF1P38789 MSB2YGR014W 3921 nt3.56□□□□□ -1.84
SSF1P38789 YFL065CYFL065C 309 nt3.56□□□□□ -1.84
SSF1P38789 COA4YLR218C 453 nt3.56□□□□□ -1.84
SSF1P38789 FPR1YNL135C 345 nt3.56□□□□□ -1.84
SSF1P38789 CRS5YOR031W 210 nt3.56□□□□□ -1.84
SSF1P38789 YOR072W-AYOR072W-A 249 nt3.56□□□□□ -1.84
SSF1P38789 FIR1YER032W 2631 nt3.56□□□□□ -1.84
SSF1P38789 SSN2YDR443C 4263 nt3.56□□□□□ -1.84
SSF1P38789 NUP120YKL057C 3114 nt3.55□□□□□ -1.84
SSF1P38789 DIS3YOL021C 3006 nt3.55□□□□□ -1.84
SSF1P38789 RRM3YHR031C 2172 nt3.55□□□□□ -1.84
SSF1P38789 YGL149WYGL149W 306 nt3.55□□□□□ -1.84
SSF1P38789 PEX4YGR133W 552 nt3.55□□□□□ -1.84
SSF1P38789 YJL222W-BYJL222W-B 138 nt3.55□□□□□ -1.84
SSF1P38789 RPS27AYKL156W 249 nt3.55□□□□□ -1.84
SSF1P38789 TAR1YLR154W-C 375 nt3.55□□□□□ -1.84
SSF1P38789 TMA10YLR327C 261 nt3.55□□□□□ -1.84
SSF1P38789 GRX8YLR364W 330 nt3.55□□□□□ -1.84
SSF1P38789 LSM7YNL147W 348 nt3.55□□□□□ -1.84
SSF1P38789 YBR121C-AYBR121C-A 159 nt3.55□□□□□ -1.84
SSF1P38789 YIL169CYIL169C 2988 nt3.54□□□□□ -1.84
SSF1P38789 SGD1YLR336C 2700 nt3.54□□□□□ -1.84
SSF1P38789 HCH1YNL281W 462 nt3.54□□□□□ -1.84
SSF1P38789 OSW7YFR039C 1533 nt3.54□□□□□ -1.84
SSF1P38789 SPO14YKR031C 5052 nt3.53□□□□□ -1.84
SSF1P38789 QCR7YDR529C 384 nt3.53□□□□□ -1.84
SSF1P38789 RPL23BYER117W 414 nt3.52□□□□□ -1.85
SSF1P38789 RTC6YPL183W-A 282 nt3.52□□□□□ -1.85
SSF1P38789 CSR2YPR030W 3366 nt3.52□□□□□ -1.85
SSF1P38789 SDC25YLL016W 3147 nt3.51□□□□□ -1.85
SSF1P38789 SMA2YML066C 1110 nt3.51□□□□□ -1.85
SSF1P38789 RPL6AYML073C 531 nt3.51□□□□□ -1.85
SSF1P38789 COX14YML129C 213 nt3.51□□□□□ -1.85
SSF1P38789 SPO71YDR104C 3738 nt3.51□□□□□ -1.85
SSF1P38789 DOT6YER088C 2013 nt3.51□□□□□ -1.85
SSF1P38789 SOK2YMR016C 2358 nt3.51□□□□□ -1.85
SSF1P38789 TCB2YNL087W 3537 nt3.5□□□□□ -1.85
SSF1P38789 FMP16YDR070C 282 nt3.5□□□□□ -1.85
SSF1P38789 RGA2YDR379W 3030 nt3.49□□□□□ -1.85
SSF1P38789 SNU114YKL173W 3027 nt3.49□□□□□ -1.85
SSF1P38789 RPL35AYDL191W 363 nt3.49□□□□□ -1.85
SSF1P38789 HOP2YGL033W 657 nt3.49□□□□□ -1.85
SSF1P38789 snR51snR51 107 nt3.49□□□□□ -1.85
SSF1P38789 HRD3YLR207W 2502 nt3.49□□□□□ -1.85
SSF1P38789 RBK1YCR036W 1002 nt3.48□□□□□ -1.85
SSF1P38789 RPL32YBL092W 393 nt3.48□□□□□ -1.85
SSF1P38789 RPS12YOR369C 432 nt3.48□□□□□ -1.85
SSF1P38789 ILS1YBL076C 3219 nt3.47□□□□□ -1.85
SSF1P38789 YJL015CYJL015C 285 nt3.47□□□□□ -1.85
SSF1P38789 HTB2YBL002W 396 nt3.47□□□□□ -1.85
SSF1P38789 YPR099CYPR099C 357 nt3.47□□□□□ -1.85
SSF1P38789 STT4YLR305C 5703 nt3.47□□□□□ -1.85
SSF1P38789 RCY1YJL204C 2523 nt3.47□□□□□ -1.85
SSF1P38789 PAC1YOR269W 1485 nt3.47□□□□□ -1.85
SSF1P38789 SPG3YDR504C 384 nt3.46□□□□□ -1.86
SSF1P38789 SNC2YOR327C 348 nt3.46□□□□□ -1.86
SSF1P38789 SIN3YOL004W 4611 nt3.46□□□□□ -1.86
SSF1P38789 UTP14YML093W 2700 nt3.46□□□□□ -1.86
SSF1P38789 VPS35YJL154C 2835 nt3.46□□□□□ -1.86
SSF1P38789 MMS22YLR320W 4365 nt3.46□□□□□ -1.86
SSF1P38789 BUD4YJR092W 4344 nt3.46□□□□□ -1.86
SSF1P38789 DFG16YOR030W 1860 nt3.45□□□□□ -1.86
SSF1P38789 YDR186CYDR186C 2634 nt3.45□□□□□ -1.86
SSF1P38789 CSN9YDR179C 489 nt3.45□□□□□ -1.86
SSF1P38789 YIL059CYIL059C 366 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 53.7 ms