RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C FAP1P53971 965 aa15.39■□□□□ 0.05
SPG3YDR504C MTC1P47018 478 aaKnown RBP14.92□□□□□ -0.02
SPG3YDR504C PRY3P47033 881 aa14.52□□□□□ -0.09
SPG3YDR504C AAD16Q02895 342 aa13.69□□□□□ -0.22
SPG3YDR504C YCK3P39962 524 aa13.65□□□□□ -0.22
SPG3YDR504C PRI1P10363 409 aa13.55□□□□□ -0.24
SPG3YDR504C HAA1Q12753 694 aaKnown RBP13.51□□□□□ -0.25
SPG3YDR504C ISW2Q08773 1120 aa12.75□□□□□ -0.37
SPG3YDR504C TSR3Q12094 313 aaKnown RBP12.74□□□□□ -0.37
SPG3YDR504C RPG1P38249 964 aaKnown RBP12.69□□□□□ -0.38
SPG3YDR504C DRS1P32892 752 aaKnown RBP12.27□□□□□ -0.45
SPG3YDR504C MRPL32P25348 183 aa12.23□□□□□ -0.45
SPG3YDR504C YGL015CP33199 130 aa12.21□□□□□ -0.45
SPG3YDR504C BUD31P25337 157 aaPredicted RBP11.91□□□□□ -0.5
SPG3YDR504C RSE1Q04693 1361 aaKnown RBP11.46□□□□□ -0.57
SPG3YDR504C DIP2Q12220 943 aaPredicted RBP11.38□□□□□ -0.59
SPG3YDR504C REB1P21538 810 aa11.32□□□□□ -0.6
SPG3YDR504C CDC27P38042 758 aa11.32□□□□□ -0.6
SPG3YDR504C RPL17AP05740 184 aaKnown RBP11.22□□□□□ -0.61
SPG3YDR504C RPL17BP46990 184 aaKnown RBP11.22□□□□□ -0.61
SPG3YDR504C SIS1P25294 352 aaKnown RBP11.21□□□□□ -0.61
SPG3YDR504C UBP10P53874 792 aaPredicted RBP11.17□□□□□ -0.62
SPG3YDR504C MAP2P38174 421 aaKnown RBP11.16□□□□□ -0.62
SPG3YDR504C UBP9P39967 754 aa10.93□□□□□ -0.66
SPG3YDR504C YKR023WP36119 530 aaKnown RBP10.88□□□□□ -0.67
SPG3YDR504C TIF4632P39936 914 aaKnown RBP10.75□□□□□ -0.69
SPG3YDR504C TGL3P40308 642 aa10.74□□□□□ -0.69
SPG3YDR504C DCD1P06773 312 aa10.68□□□□□ -0.7
SPG3YDR504C HOP09932 586 aa10.68□□□□□ -0.7
SPG3YDR504C SCY1P53009 804 aa10.64□□□□□ -0.71
SPG3YDR504C TFC8Q12308 588 aa10.64□□□□□ -0.71
SPG3YDR504C SLX5P32828 619 aaKnown RBP10.59□□□□□ -0.71
SPG3YDR504C SPT21P35209 758 aa10.57□□□□□ -0.72
SPG3YDR504C AVT3P36062 692 aa10.47□□□□□ -0.73
SPG3YDR504C BCH2P36122 765 aa10.25□□□□□ -0.77
SPG3YDR504C YBL029C-AQ3E756 94 aa10.2□□□□□ -0.78
SPG3YDR504C MST1P07236 462 aa10.08□□□□□ -0.8
SPG3YDR504C VNX1P42839 908 aa10.02□□□□□ -0.81
SPG3YDR504C YOR238WQ08634 303 aa9.98□□□□□ -0.81
SPG3YDR504C SPP1Q03012 353 aa9.93□□□□□ -0.82
SPG3YDR504C YJL171CP46992 396 aa9.92□□□□□ -0.82
SPG3YDR504C AIR2Q12476 344 aaKnown RBP9.9□□□□□ -0.82
SPG3YDR504C BDF1P35817 686 aa9.87□□□□□ -0.83
SPG3YDR504C RIM101P33400 625 aa9.85□□□□□ -0.83
SPG3YDR504C EPS1P40557 701 aa9.85□□□□□ -0.83
SPG3YDR504C WSC3Q12215 556 aa9.81□□□□□ -0.84
SPG3YDR504C FKH1P40466 484 aa9.78□□□□□ -0.84
SPG3YDR504C NSR1P27476 414 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
SPG3YDR504C TIF11P38912 153 aaKnown RBP9.69□□□□□ -0.86
SPG3YDR504C YAP5P40574 245 aa9.65□□□□□ -0.86
SPG3YDR504C BMT6Q12291 365 aa9.62□□□□□ -0.87
SPG3YDR504C LDB19Q12502 818 aa9.56□□□□□ -0.88
SPG3YDR504C GTT3P39996 337 aa9.5□□□□□ -0.89
SPG3YDR504C OXP1P28273 1286 aa9.49□□□□□ -0.89
SPG3YDR504C ULI1P43604 169 aa9.49□□□□□ -0.89
SPG3YDR504C BFR2Q06631 534 aaKnown RBP9.48□□□□□ -0.89
SPG3YDR504C IOC2Q12072 812 aa9.48□□□□□ -0.89
SPG3YDR504C PTP3P40048 928 aa9.4□□□□□ -0.9
SPG3YDR504C BBC1P47068 1157 aa9.37□□□□□ -0.91
SPG3YDR504C YIL055CP40523 627 aaKnown RBP9.36□□□□□ -0.91
SPG3YDR504C AI2P03876 854 aa9.26□□□□□ -0.93
SPG3YDR504C RTG1P32607 177 aa9.25□□□□□ -0.93
SPG3YDR504C PIB1Q06651 286 aa9.24□□□□□ -0.93
SPG3YDR504C NCR1Q12200 1170 aa9.24□□□□□ -0.93
SPG3YDR504C RSM7P47150 247 aa9.22□□□□□ -0.93
SPG3YDR504C EAP1P36041 632 aaKnown RBP9.19□□□□□ -0.94
SPG3YDR504C MSB4Q12317 492 aa9.18□□□□□ -0.94
SPG3YDR504C TRP5P00931 707 aaKnown RBP9.12□□□□□ -0.95
SPG3YDR504C BCK2P33306 851 aa9.1□□□□□ -0.95
SPG3YDR504C SEC61P32915 480 aa9.08□□□□□ -0.96
SPG3YDR504C YNL035CP53962 389 aaKnown RBP9.08□□□□□ -0.96
SPG3YDR504C SET4P42948 560 aa9.07□□□□□ -0.96
SPG3YDR504C YOL036WQ08206 761 aa9.05□□□□□ -0.96
SPG3YDR504C TFG1P41895 735 aaPredicted RBP8.98□□□□□ -0.97
SPG3YDR504C YAH1Q12184 172 aaKnown RBP8.98□□□□□ -0.97
SPG3YDR504C RGA2Q06407 1009 aa8.97□□□□□ -0.97
SPG3YDR504C SAP30P38429 201 aa8.96□□□□□ -0.98
SPG3YDR504C CHL1P22516 861 aaPredicted RBP8.94□□□□□ -0.98
SPG3YDR504C PRE3P38624 215 aa8.86□□□□□ -0.99
SPG3YDR504C MRM1P25270 412 aa8.85□□□□□ -0.99
SPG3YDR504C DAN4P47179 1161 aa8.83□□□□□ -1
SPG3YDR504C YDL129WQ07555 291 aa8.82□□□□□ -1
SPG3YDR504C XDJ1P39102 459 aa8.79□□□□□ -1
SPG3YDR504C PSD2P53037 1138 aaKnown RBP8.79□□□□□ -1
SPG3YDR504C DBP1P24784 617 aaKnown RBP8.77□□□□□ -1.01
SPG3YDR504C JIP4Q03361 876 aa8.77□□□□□ -1.01
SPG3YDR504C VMA1P17255 1071 aaKnown RBP8.76□□□□□ -1.01
SPG3YDR504C SAM3Q08986 587 aa8.76□□□□□ -1.01
SPG3YDR504C VRP1P37370 817 aa8.75□□□□□ -1.01
SPG3YDR504C YMR1P47147 688 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
SPG3YDR504C YLR271WQ06152 274 aa8.75□□□□□ -1.01
SPG3YDR504C YFR006WP43590 535 aa8.74□□□□□ -1.01
SPG3YDR504C DPS1P04802 557 aaKnown RBP8.69□□□□□ -1.02
SPG3YDR504C VPS29P38759 282 aa8.68□□□□□ -1.02
SPG3YDR504C RGA1P39083 1007 aa8.67□□□□□ -1.02
SPG3YDR504C STS1P38637 319 aa8.63□□□□□ -1.03
SPG3YDR504C PTC4P38089 393 aa8.61□□□□□ -1.03
SPG3YDR504C ABP1P15891 592 aaKnown RBP8.58□□□□□ -1.04
SPG3YDR504C YDR344CQ05510 147 aa8.58□□□□□ -1.04
SPG3YDR504C GYP5Q12344 894 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms