RNA–Protein interactions for RNA: YKL220C

FRE2, Transcript of Ferric reductase and cupric reductase, yeastyeast

Gene FRE2, Length 2,136 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE2YKL220C FAP1P53971 965 aa8.39□□□□□ -1.07
FRE2YKL220C PRY3P47033 881 aa7.94□□□□□ -1.14
FRE2YKL220C MTC1P47018 478 aaKnown RBP7.57□□□□□ -1.2
FRE2YKL220C HAA1Q12753 694 aaKnown RBP7.43□□□□□ -1.22
FRE2YKL220C YCK3P39962 524 aa7.37□□□□□ -1.23
FRE2YKL220C AAD16Q02895 342 aa7.32□□□□□ -1.24
FRE2YKL220C PRI1P10363 409 aa7.16□□□□□ -1.26
FRE2YKL220C TSR3Q12094 313 aaKnown RBP6.67□□□□□ -1.34
FRE2YKL220C BUD31P25337 157 aaPredicted RBP6.66□□□□□ -1.34
FRE2YKL220C ISW2Q08773 1120 aa6.62□□□□□ -1.35
FRE2YKL220C YGL015CP33199 130 aa6.61□□□□□ -1.35
FRE2YKL220C RPG1P38249 964 aaKnown RBP6.54□□□□□ -1.36
FRE2YKL220C MRPL32P25348 183 aa6.48□□□□□ -1.37
FRE2YKL220C SIS1P25294 352 aaKnown RBP6.23□□□□□ -1.41
FRE2YKL220C DRS1P32892 752 aaKnown RBP6.23□□□□□ -1.41
FRE2YKL220C UBP9P39967 754 aa5.99□□□□□ -1.45
FRE2YKL220C UBP10P53874 792 aaPredicted RBP5.93□□□□□ -1.46
FRE2YKL220C CDC27P38042 758 aa5.83□□□□□ -1.48
FRE2YKL220C MAP2P38174 421 aaKnown RBP5.83□□□□□ -1.48
FRE2YKL220C REB1P21538 810 aa5.73□□□□□ -1.49
FRE2YKL220C TIF4632P39936 914 aaKnown RBP5.72□□□□□ -1.49
FRE2YKL220C RSE1Q04693 1361 aaKnown RBP5.72□□□□□ -1.49
FRE2YKL220C TGL3P40308 642 aa5.69□□□□□ -1.5
FRE2YKL220C RPL17AP05740 184 aaKnown RBP5.6□□□□□ -1.51
FRE2YKL220C RPL17BP46990 184 aaKnown RBP5.6□□□□□ -1.51
FRE2YKL220C SLX5P32828 619 aaKnown RBP5.52□□□□□ -1.53
FRE2YKL220C DIP2Q12220 943 aaPredicted RBP5.5□□□□□ -1.53
FRE2YKL220C YKR023WP36119 530 aaKnown RBP5.48□□□□□ -1.53
FRE2YKL220C SCY1P53009 804 aa5.47□□□□□ -1.53
FRE2YKL220C TFC8Q12308 588 aa5.38□□□□□ -1.55
FRE2YKL220C YBL029C-AQ3E756 94 aa5.38□□□□□ -1.55
FRE2YKL220C HOP09932 586 aa5.36□□□□□ -1.55
FRE2YKL220C YJL171CP46992 396 aa5.36□□□□□ -1.55
FRE2YKL220C DCD1P06773 312 aa5.35□□□□□ -1.55
FRE2YKL220C AIR2Q12476 344 aaKnown RBP5.29□□□□□ -1.56
FRE2YKL220C VNX1P42839 908 aa5.28□□□□□ -1.56
FRE2YKL220C MST1P07236 462 aa5.27□□□□□ -1.57
FRE2YKL220C SPP1Q03012 353 aa5.25□□□□□ -1.57
FRE2YKL220C FKH1P40466 484 aa5.23□□□□□ -1.57
FRE2YKL220C SPT21P35209 758 aa5.23□□□□□ -1.57
FRE2YKL220C AVT3P36062 692 aa5.23□□□□□ -1.57
FRE2YKL220C YOR238WQ08634 303 aa5.2□□□□□ -1.58
FRE2YKL220C BMT6Q12291 365 aa5.16□□□□□ -1.58
FRE2YKL220C RGA2Q06407 1009 aa5.14□□□□□ -1.59
FRE2YKL220C BCH2P36122 765 aa5.14□□□□□ -1.59
FRE2YKL220C BFR2Q06631 534 aaKnown RBP5.12□□□□□ -1.59
FRE2YKL220C TIF11P38912 153 aaKnown RBP5.11□□□□□ -1.59
FRE2YKL220C WSC3Q12215 556 aa5.1□□□□□ -1.59
FRE2YKL220C RQC2Q12532 1038 aaKnown RBP5.09□□□□□ -1.59
FRE2YKL220C NSR1P27476 414 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
FRE2YKL220C LDB19Q12502 818 aa5.01□□□□□ -1.61
FRE2YKL220C YAP5P40574 245 aa4.97□□□□□ -1.61
FRE2YKL220C ULI1P43604 169 aa4.94□□□□□ -1.62
FRE2YKL220C BDF1P35817 686 aa4.93□□□□□ -1.62
FRE2YKL220C GTT3P39996 337 aa4.93□□□□□ -1.62
FRE2YKL220C EPS1P40557 701 aa4.93□□□□□ -1.62
FRE2YKL220C IOC2Q12072 812 aa4.92□□□□□ -1.62
FRE2YKL220C BCK2P33306 851 aa4.88□□□□□ -1.63
FRE2YKL220C RGA1P39083 1007 aa4.85□□□□□ -1.63
FRE2YKL220C NCR1Q12200 1170 aa4.81□□□□□ -1.64
FRE2YKL220C RTG1P32607 177 aa4.8□□□□□ -1.64
FRE2YKL220C EAP1P36041 632 aaKnown RBP4.79□□□□□ -1.64
FRE2YKL220C MSB4Q12317 492 aa4.76□□□□□ -1.65
FRE2YKL220C RIM101P33400 625 aa4.75□□□□□ -1.65
FRE2YKL220C SEC61P32915 480 aa4.73□□□□□ -1.65
FRE2YKL220C TAF7Q05021 590 aa4.72□□□□□ -1.65
FRE2YKL220C CHL1P22516 861 aaPredicted RBP4.7□□□□□ -1.66
FRE2YKL220C YNL035CP53962 389 aaKnown RBP4.7□□□□□ -1.66
FRE2YKL220C TFG1P41895 735 aaPredicted RBP4.69□□□□□ -1.66
FRE2YKL220C TRP5P00931 707 aaKnown RBP4.67□□□□□ -1.66
FRE2YKL220C XDJ1P39102 459 aa4.67□□□□□ -1.66
FRE2YKL220C BBC1P47068 1157 aa4.65□□□□□ -1.67
FRE2YKL220C TFA1P36100 482 aa4.64□□□□□ -1.67
FRE2YKL220C DPS1P04802 557 aaKnown RBP4.64□□□□□ -1.67
FRE2YKL220C SAP30P38429 201 aa4.63□□□□□ -1.67
FRE2YKL220C PRE3P38624 215 aa4.63□□□□□ -1.67
FRE2YKL220C YOL036WQ08206 761 aa4.6□□□□□ -1.67
FRE2YKL220C SET4P42948 560 aa4.58□□□□□ -1.68
FRE2YKL220C PIB1Q06651 286 aa4.58□□□□□ -1.68
FRE2YKL220C VRP1P37370 817 aa4.57□□□□□ -1.68
FRE2YKL220C YIL055CP40523 627 aaKnown RBP4.57□□□□□ -1.68
FRE2YKL220C OXP1P28273 1286 aa4.57□□□□□ -1.68
FRE2YKL220C PTP3P40048 928 aa4.57□□□□□ -1.68
FRE2YKL220C YDL129WQ07555 291 aa4.56□□□□□ -1.68
FRE2YKL220C SRC1Q03707 834 aa4.51□□□□□ -1.69
FRE2YKL220C AI2P03876 854 aa4.5□□□□□ -1.69
FRE2YKL220C JIP4Q03361 876 aa4.49□□□□□ -1.69
FRE2YKL220C DAN4P47179 1161 aa4.48□□□□□ -1.69
FRE2YKL220C RSM7P47150 247 aa4.46□□□□□ -1.69
FRE2YKL220C YAH1Q12184 172 aaKnown RBP4.45□□□□□ -1.7
FRE2YKL220C URN1Q06525 465 aaKnown RBP4.41□□□□□ -1.7
FRE2YKL220C ELP4Q02884 456 aaKnown RBP4.39□□□□□ -1.71
FRE2YKL220C SAM3Q08986 587 aa4.39□□□□□ -1.71
FRE2YKL220C ABP1P15891 592 aaKnown RBP4.37□□□□□ -1.71
FRE2YKL220C VMA1P17255 1071 aaKnown RBP4.34□□□□□ -1.71
FRE2YKL220C YPL062WQ02781 134 aa4.34□□□□□ -1.71
FRE2YKL220C YLR271WQ06152 274 aa4.33□□□□□ -1.72
FRE2YKL220C PTC4P38089 393 aa4.33□□□□□ -1.72
FRE2YKL220C HTA1P04911 132 aaKnown RBP4.31□□□□□ -1.72
FRE2YKL220C HTA2P04912 132 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms