Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 AL137060.1-201ENST00000618151 2648 ntBASIC17.82■□□□□ 0.44
CDH20Q9HBT6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.81■□□□□ 0.44
CDH20Q9HBT6 AF201337.1-201ENST00000520239 748 ntBASIC17.81■□□□□ 0.44
CDH20Q9HBT6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH20Q9HBT6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 AC105036.2-201ENST00000569468 176 ntBASIC17.8■□□□□ 0.44
CDH20Q9HBT6 AL121832.2-201ENST00000610979 668 ntBASIC17.8■□□□□ 0.44
CDH20Q9HBT6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDH20Q9HBT6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 AC133552.2-202ENST00000575694 574 ntBASIC17.79■□□□□ 0.44
CDH20Q9HBT6 AL050303.2-201ENST00000619798 666 ntBASIC17.79■□□□□ 0.44
CDH20Q9HBT6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDH20Q9HBT6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 AC006128.1-201ENST00000624704 1661 ntBASIC17.78■□□□□ 0.44
CDH20Q9HBT6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 PGM5P4-201ENST00000421970 445 ntBASIC17.78■□□□□ 0.44
CDH20Q9HBT6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.78■□□□□ 0.44
CDH20Q9HBT6 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.78■□□□□ 0.44
CDH20Q9HBT6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 PLK5-205ENST00000642079 1969 ntBASIC17.78■□□□□ 0.44
CDH20Q9HBT6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH20Q9HBT6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms