Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.47■□□□□ 0.23
VMA21Q3ZAQ7 AC073314.1-201ENST00000568729 2216 ntBASIC16.47■□□□□ 0.23
VMA21Q3ZAQ7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VMA21Q3ZAQ7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VMA21Q3ZAQ7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VMA21Q3ZAQ7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VMA21Q3ZAQ7 AC020907.5-201ENST00000624372 1936 ntBASIC16.47■□□□□ 0.23
VMA21Q3ZAQ7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 AC007322.3-201ENST00000426526 701 ntBASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 CDV3P1-201ENST00000471403 739 ntBASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VMA21Q3ZAQ7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 AC019069.1-201ENST00000610008 1333 ntBASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 RBM17P2-201ENST00000616397 1405 ntBASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VMA21Q3ZAQ7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 NTF6G-201ENST00000591094 616 ntBASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 MYCNOS-205ENST00000641950 531 ntBASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VMA21Q3ZAQ7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 AC092720.2-201ENST00000602388 1665 ntBASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 AC091799.1-201ENST00000422823 811 ntBASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 AC097381.1-201ENST00000429019 1296 ntBASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 UBE2DNL-204ENST00000602536 740 ntBASIC16.43■□□□□ 0.22
VMA21Q3ZAQ7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms