Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YKR033CYKR033C 426 nt3.71□□□□□ -1.82
UFD2P54860 snR42snR42 351 nt3.71□□□□□ -1.82
UFD2P54860 MGR1YCL044C 1254 nt3.71□□□□□ -1.82
UFD2P54860 PKH1YDR490C 2301 nt3.71□□□□□ -1.82
UFD2P54860 AIM9YER080W 1884 nt3.71□□□□□ -1.82
UFD2P54860 RPN2YIL075C 2838 nt3.71□□□□□ -1.82
UFD2P54860 LCL2YLR104W 396 nt3.7□□□□□ -1.82
UFD2P54860 YCK3YER123W 1575 nt3.7□□□□□ -1.82
UFD2P54860 SKT5YBL061C 2091 nt3.7□□□□□ -1.82
UFD2P54860 SSE1YPL106C 2082 nt3.69□□□□□ -1.82
UFD2P54860 CCW14YLR390W-A 717 nt3.69□□□□□ -1.82
UFD2P54860 RPL20BYOR312C 519 nt3.69□□□□□ -1.82
UFD2P54860 PRP22YER013W 3438 nt3.69□□□□□ -1.82
UFD2P54860 AUS1YOR011W 4185 nt3.69□□□□□ -1.82
UFD2P54860 VPS64YDR200C 1815 nt3.69□□□□□ -1.82
UFD2P54860 ECM25YJL201W 1800 nt3.69□□□□□ -1.82
UFD2P54860 ARP7YPR034W 1434 nt3.69□□□□□ -1.82
UFD2P54860 BNA4YBL098W 1383 nt3.68□□□□□ -1.82
UFD2P54860 DOA4YDR069C 2781 nt3.68□□□□□ -1.82
UFD2P54860 FAP7YDL166C 594 nt3.68□□□□□ -1.82
UFD2P54860 YIL066W-AYIL066W-A 444 nt3.68□□□□□ -1.82
UFD2P54860 TRM7YBR061C 933 nt3.68□□□□□ -1.82
UFD2P54860 YPR146CYPR146C 330 nt3.68□□□□□ -1.82
UFD2P54860 YIL166CYIL166C 1629 nt3.68□□□□□ -1.82
UFD2P54860 STE6YKL209C 3873 nt3.68□□□□□ -1.82
UFD2P54860 PAC1YOR269W 1485 nt3.67□□□□□ -1.82
UFD2P54860 YMR317WYMR317W 3423 nt3.67□□□□□ -1.82
UFD2P54860 FUS1YCL027W 1539 nt3.67□□□□□ -1.82
UFD2P54860 YDL062WYDL062W 426 nt3.67□□□□□ -1.82
UFD2P54860 tF(GAA)DtF(GAA)D 73 nt3.67□□□□□ -1.82
UFD2P54860 tF(GAA)NtF(GAA)N 73 nt3.67□□□□□ -1.82
UFD2P54860 YER121WYER121W 345 nt3.67□□□□□ -1.82
UFD2P54860 YJL197C-AYJL197C-A 282 nt3.67□□□□□ -1.82
UFD2P54860 HTB2YBL002W 396 nt3.67□□□□□ -1.82
UFD2P54860 ARO1YDR127W 4767 nt3.67□□□□□ -1.82
UFD2P54860 RAD5YLR032W 3510 nt3.67□□□□□ -1.82
UFD2P54860 YDR210W-BYDR210W-B 5313 nt3.66□□□□□ -1.82
UFD2P54860 YDR261W-BYDR261W-B 5313 nt3.66□□□□□ -1.82
UFD2P54860 YFL002W-AYFL002W-A 5313 nt3.66□□□□□ -1.82
UFD2P54860 YGR161W-BYGR161W-B 5313 nt3.66□□□□□ -1.82
UFD2P54860 YLR410W-BYLR410W-B 5313 nt3.66□□□□□ -1.82
UFD2P54860 YCL019WYCL019W 5313 nt3.66□□□□□ -1.82
UFD2P54860 YEL020C-BYEL020C-B 198 nt3.66□□□□□ -1.82
UFD2P54860 YGL041CYGL041C 204 nt3.66□□□□□ -1.82
UFD2P54860 ABF2YMR072W 552 nt3.66□□□□□ -1.82
UFD2P54860 MF(ALPHA)1YPL187W 498 nt3.66□□□□□ -1.82
UFD2P54860 DAD3YBR233W-A 285 nt3.66□□□□□ -1.82
UFD2P54860 snR49snR49 165 nt3.66□□□□□ -1.82
UFD2P54860 EXO84YBR102C 2262 nt3.66□□□□□ -1.82
UFD2P54860 DIA2YOR080W 2199 nt3.66□□□□□ -1.82
UFD2P54860 TCP1YDR212W 1680 nt3.65□□□□□ -1.82
UFD2P54860 MTR4YJL050W 3222 nt3.65□□□□□ -1.82
UFD2P54860 YDR048CYDR048C 315 nt3.65□□□□□ -1.83
UFD2P54860 YFL065CYFL065C 309 nt3.65□□□□□ -1.83
UFD2P54860 AYR1YIL124W 894 nt3.65□□□□□ -1.83
UFD2P54860 YMR307C-AYMR307C-A 195 nt3.65□□□□□ -1.83
UFD2P54860 RPL32YBL092W 393 nt3.65□□□□□ -1.83
UFD2P54860 BOI1YBL085W 2943 nt3.65□□□□□ -1.83
UFD2P54860 RLF2YPR018W 1821 nt3.65□□□□□ -1.83
UFD2P54860 ZDS2YML109W 2829 nt3.65□□□□□ -1.83
UFD2P54860 SMC3YJL074C 3693 nt3.65□□□□□ -1.83
UFD2P54860 MET10YFR030W 3108 nt3.64□□□□□ -1.83
UFD2P54860 MDV1YJL112W 2145 nt3.64□□□□□ -1.83
UFD2P54860 CIN8YEL061C 3003 nt3.64□□□□□ -1.83
UFD2P54860 YGL239CYGL239C 315 nt3.64□□□□□ -1.83
UFD2P54860 RPL40AYIL148W 387 nt3.64□□□□□ -1.83
UFD2P54860 YAL059C-AYAL059C-A 423 nt3.64□□□□□ -1.83
UFD2P54860 SDH2YLL041C 801 nt3.64□□□□□ -1.83
UFD2P54860 FAR1YJL157C 2493 nt3.64□□□□□ -1.83
UFD2P54860 MCD1YDL003W 1701 nt3.64□□□□□ -1.83
UFD2P54860 YHR080CYHR080C 4038 nt3.63□□□□□ -1.83
UFD2P54860 TIM13YGR181W 318 nt3.63□□□□□ -1.83
UFD2P54860 APQ12YIL040W 417 nt3.63□□□□□ -1.83
UFD2P54860 YMR324CYMR324C 243 nt3.63□□□□□ -1.83
UFD2P54860 RPL36BYPL249C-A 303 nt3.63□□□□□ -1.83
UFD2P54860 YCL023CYCL023C 348 nt3.63□□□□□ -1.83
UFD2P54860 NTO1YPR031W 2247 nt3.62□□□□□ -1.83
UFD2P54860 SET1YHR119W 3243 nt3.62□□□□□ -1.83
UFD2P54860 APC9YLR102C 798 nt3.62□□□□□ -1.83
UFD2P54860 GIS2YNL255C 462 nt3.62□□□□□ -1.83
UFD2P54860 STE23YLR389C 3084 nt3.62□□□□□ -1.83
UFD2P54860 DBP6YNR038W 1890 nt3.62□□□□□ -1.83
UFD2P54860 RRP5YMR229C 5190 nt3.61□□□□□ -1.83
UFD2P54860 YFH1YDL120W 525 nt3.61□□□□□ -1.83
UFD2P54860 PAM16YJL104W 450 nt3.61□□□□□ -1.83
UFD2P54860 SIZ1YDR409W 2715 nt3.61□□□□□ -1.83
UFD2P54860 RAD61YDR014W 1944 nt3.6□□□□□ -1.83
UFD2P54860 SPB1YCL054W 2526 nt3.6□□□□□ -1.83
UFD2P54860 TIM11YDR322C-A 291 nt3.6□□□□□ -1.83
UFD2P54860 YIL102CYIL102C 306 nt3.6□□□□□ -1.83
UFD2P54860 YOR008C-AYOR008C-A 225 nt3.6□□□□□ -1.83
UFD2P54860 VTC4YJL012C 2166 nt3.6□□□□□ -1.83
UFD2P54860 APC2YLR127C 2562 nt3.59□□□□□ -1.83
UFD2P54860 HCS1YKL017C 2052 nt3.59□□□□□ -1.83
UFD2P54860 ISD11YER048W-A 285 nt3.59□□□□□ -1.83
UFD2P54860 RAM2YKL019W 951 nt3.59□□□□□ -1.83
UFD2P54860 YOL155W-AYOL155W-A 135 nt3.59□□□□□ -1.83
UFD2P54860 YBR121C-AYBR121C-A 159 nt3.59□□□□□ -1.83
UFD2P54860 PSO2YMR137C 1986 nt3.59□□□□□ -1.83
UFD2P54860 POM152YMR129W 4014 nt3.59□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 71 ms