RNA–Protein interactions for RNA: YPL106C

SSE1, Transcript of ATPase component of heat shock protein Hsp90 chaperone complex, yeastyeast

Gene SSE1, Length 2,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSE1YPL106C MTC1P47018 478 aaKnown RBP8.93□□□□□ -0.98
SSE1YPL106C FAP1P53971 965 aa8.47□□□□□ -1.05
SSE1YPL106C DRS1P32892 752 aaKnown RBP7.98□□□□□ -1.13
SSE1YPL106C PRY3P47033 881 aa7.96□□□□□ -1.14
SSE1YPL106C AAD16Q02895 342 aa7.76□□□□□ -1.17
SSE1YPL106C PRI1P10363 409 aa7.74□□□□□ -1.17
SSE1YPL106C ISW2Q08773 1120 aa7.53□□□□□ -1.2
SSE1YPL106C HAA1Q12753 694 aaKnown RBP7.49□□□□□ -1.21
SSE1YPL106C YCK3P39962 524 aa7.43□□□□□ -1.22
SSE1YPL106C RPG1P38249 964 aaKnown RBP7.42□□□□□ -1.22
SSE1YPL106C TSR3Q12094 313 aaKnown RBP7.28□□□□□ -1.24
SSE1YPL106C DIP2Q12220 943 aaPredicted RBP7.13□□□□□ -1.27
SSE1YPL106C MRPL32P25348 183 aa7.05□□□□□ -1.28
SSE1YPL106C RSE1Q04693 1361 aaKnown RBP7.03□□□□□ -1.28
SSE1YPL106C YGL015CP33199 130 aa6.88□□□□□ -1.31
SSE1YPL106C REB1P21538 810 aa6.83□□□□□ -1.32
SSE1YPL106C RPL17AP05740 184 aaKnown RBP6.81□□□□□ -1.32
SSE1YPL106C RPL17BP46990 184 aaKnown RBP6.81□□□□□ -1.32
SSE1YPL106C AVT3P36062 692 aa6.76□□□□□ -1.33
SSE1YPL106C CDC27P38042 758 aa6.56□□□□□ -1.36
SSE1YPL106C UBP10P53874 792 aaPredicted RBP6.48□□□□□ -1.37
SSE1YPL106C BFR2Q06631 534 aaKnown RBP6.48□□□□□ -1.37
SSE1YPL106C YKR023WP36119 530 aaKnown RBP6.46□□□□□ -1.37
SSE1YPL106C SPT21P35209 758 aa6.45□□□□□ -1.38
SSE1YPL106C BUD31P25337 157 aaPredicted RBP6.43□□□□□ -1.38
SSE1YPL106C MAP2P38174 421 aaKnown RBP6.41□□□□□ -1.38
SSE1YPL106C TFC8Q12308 588 aa6.34□□□□□ -1.39
SSE1YPL106C HOP09932 586 aa6.34□□□□□ -1.4
SSE1YPL106C DCD1P06773 312 aa6.29□□□□□ -1.4
SSE1YPL106C TIF4632P39936 914 aaKnown RBP6.25□□□□□ -1.41
SSE1YPL106C SCY1P53009 804 aa6.24□□□□□ -1.41
SSE1YPL106C TGL3P40308 642 aa6.21□□□□□ -1.41
SSE1YPL106C SLX5P32828 619 aaKnown RBP6.21□□□□□ -1.42
SSE1YPL106C TFA1P36100 482 aa6.18□□□□□ -1.42
SSE1YPL106C RIM101P33400 625 aa6.18□□□□□ -1.42
SSE1YPL106C UBP9P39967 754 aa6.17□□□□□ -1.42
SSE1YPL106C SIS1P25294 352 aaKnown RBP6.13□□□□□ -1.43
SSE1YPL106C BCH2P36122 765 aa6.11□□□□□ -1.43
SSE1YPL106C EPS1P40557 701 aa5.95□□□□□ -1.46
SSE1YPL106C OXP1P28273 1286 aa5.93□□□□□ -1.46
SSE1YPL106C BDF1P35817 686 aa5.93□□□□□ -1.46
SSE1YPL106C YIL055CP40523 627 aaKnown RBP5.91□□□□□ -1.46
SSE1YPL106C PTP3P40048 928 aa5.9□□□□□ -1.47
SSE1YPL106C MST1P07236 462 aa5.88□□□□□ -1.47
SSE1YPL106C YOR238WQ08634 303 aa5.88□□□□□ -1.47
SSE1YPL106C BBC1P47068 1157 aa5.83□□□□□ -1.48
SSE1YPL106C YBL029C-AQ3E756 94 aa5.83□□□□□ -1.48
SSE1YPL106C NSR1P27476 414 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
SSE1YPL106C RSM7P47150 247 aa5.81□□□□□ -1.48
SSE1YPL106C YAP5P40574 245 aa5.78□□□□□ -1.48
SSE1YPL106C VNX1P42839 908 aa5.77□□□□□ -1.49
SSE1YPL106C AI2P03876 854 aa5.76□□□□□ -1.49
SSE1YPL106C SPP1Q03012 353 aa5.75□□□□□ -1.49
SSE1YPL106C YAH1Q12184 172 aaKnown RBP5.72□□□□□ -1.49
SSE1YPL106C WSC3Q12215 556 aa5.71□□□□□ -1.5
SSE1YPL106C GTT3P39996 337 aa5.68□□□□□ -1.5
SSE1YPL106C TIF11P38912 153 aaKnown RBP5.67□□□□□ -1.5
SSE1YPL106C YJL171CP46992 396 aa5.65□□□□□ -1.51
SSE1YPL106C AIR2Q12476 344 aaKnown RBP5.62□□□□□ -1.51
SSE1YPL106C FKH1P40466 484 aa5.61□□□□□ -1.51
SSE1YPL106C YLR271WQ06152 274 aa5.59□□□□□ -1.51
SSE1YPL106C ULI1P43604 169 aa5.57□□□□□ -1.52
SSE1YPL106C PSD2P53037 1138 aaKnown RBP5.56□□□□□ -1.52
SSE1YPL106C LDB19Q12502 818 aa5.55□□□□□ -1.52
SSE1YPL106C PIB1Q06651 286 aa5.54□□□□□ -1.52
SSE1YPL106C IOC2Q12072 812 aa5.54□□□□□ -1.52
SSE1YPL106C MRM1P25270 412 aa5.53□□□□□ -1.52
SSE1YPL106C BMT6Q12291 365 aa5.53□□□□□ -1.52
SSE1YPL106C EAP1P36041 632 aaKnown RBP5.52□□□□□ -1.53
SSE1YPL106C MSB4Q12317 492 aa5.52□□□□□ -1.53
SSE1YPL106C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SSE1YPL106C SSP1P38871 571 aa5.47□□□□□ -1.53
SSE1YPL106C YMR1P47147 688 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
SSE1YPL106C RTG1P32607 177 aa5.45□□□□□ -1.54
SSE1YPL106C RQC2Q12532 1038 aaKnown RBP5.45□□□□□ -1.54
SSE1YPL106C YOL036WQ08206 761 aa5.44□□□□□ -1.54
SSE1YPL106C SET4P42948 560 aa5.44□□□□□ -1.54
SSE1YPL106C TRP5P00931 707 aaKnown RBP5.43□□□□□ -1.54
SSE1YPL106C NCR1Q12200 1170 aa5.43□□□□□ -1.54
SSE1YPL106C DBP1P24784 617 aaKnown RBP5.42□□□□□ -1.54
SSE1YPL106C RTG3P38165 486 aa5.41□□□□□ -1.54
SSE1YPL106C YNL035CP53962 389 aaKnown RBP5.41□□□□□ -1.54
SSE1YPL106C VPS29P38759 282 aa5.41□□□□□ -1.54
SSE1YPL106C SEC61P32915 480 aa5.39□□□□□ -1.55
SSE1YPL106C VMA1P17255 1071 aaKnown RBP5.38□□□□□ -1.55
SSE1YPL106C YFR006WP43590 535 aa5.38□□□□□ -1.55
SSE1YPL106C MGA2P40578 1113 aa5.38□□□□□ -1.55
SSE1YPL106C TFG1P41895 735 aaPredicted RBP5.38□□□□□ -1.55
SSE1YPL106C SAM3Q08986 587 aa5.38□□□□□ -1.55
SSE1YPL106C CST9Q06032 482 aa5.36□□□□□ -1.55
SSE1YPL106C STS1P38637 319 aa5.34□□□□□ -1.55
SSE1YPL106C ABP1P15891 592 aaKnown RBP5.33□□□□□ -1.56
SSE1YPL106C JIP4Q03361 876 aa5.32□□□□□ -1.56
SSE1YPL106C GYP5Q12344 894 aa5.3□□□□□ -1.56
SSE1YPL106C SAP30P38429 201 aa5.28□□□□□ -1.56
SSE1YPL106C DAN4P47179 1161 aa5.28□□□□□ -1.56
SSE1YPL106C HTA1P04911 132 aaKnown RBP5.27□□□□□ -1.57
SSE1YPL106C HTA2P04912 132 aa5.27□□□□□ -1.57
SSE1YPL106C YDL129WQ07555 291 aa5.27□□□□□ -1.57
SSE1YPL106C CHL1P22516 861 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms