Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CFAP54Q96N23 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.52■■□□□ 1.84
CFAP54Q96N23 AC108673.1-201ENST00000510422 1159 ntBASIC26.52■■□□□ 1.84
CFAP54Q96N23 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFAP54Q96N23 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.51■■□□□ 1.83
CFAP54Q96N23 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CFAP54Q96N23 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CFAP54Q96N23 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP54Q96N23 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP54Q96N23 WASH5P-204ENST00000632292 975 ntBASIC26.5■■□□□ 1.83
CFAP54Q96N23 RARRES2P1-201ENST00000474487 481 ntBASIC26.5■■□□□ 1.83
CFAP54Q96N23 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFAP54Q96N23 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CFAP54Q96N23 MIR935-201ENST00000401179 91 ntBASIC26.49■■□□□ 1.83
CFAP54Q96N23 AL035685.1-201ENST00000636663 812 ntBASIC26.49■■□□□ 1.83
CFAP54Q96N23 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.48■■□□□ 1.83
CFAP54Q96N23 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.48■■□□□ 1.83
CFAP54Q96N23 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CFAP54Q96N23 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.47■■□□□ 1.83
CFAP54Q96N23 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP54Q96N23 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CFAP54Q96N23 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.47■■□□□ 1.83
CFAP54Q96N23 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.47■■□□□ 1.83
CFAP54Q96N23 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.47■■□□□ 1.83
CFAP54Q96N23 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CFAP54Q96N23 TSPY13P-201ENST00000338964 914 ntBASIC26.46■■□□□ 1.83
CFAP54Q96N23 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.46■■□□□ 1.83
CFAP54Q96N23 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.45■■□□□ 1.83
CFAP54Q96N23 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
CFAP54Q96N23 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CFAP54Q96N23 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.44■■□□□ 1.82
CFAP54Q96N23 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CFAP54Q96N23 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.43■■□□□ 1.82
CFAP54Q96N23 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CFAP54Q96N23 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.42■■□□□ 1.82
CFAP54Q96N23 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CFAP54Q96N23 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CFAP54Q96N23 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
CFAP54Q96N23 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CFAP54Q96N23 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.39■■□□□ 1.81
CFAP54Q96N23 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.38■■□□□ 1.81
CFAP54Q96N23 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CFAP54Q96N23 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CFAP54Q96N23 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CFAP54Q96N23 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.36■■□□□ 1.81
CFAP54Q96N23 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.36■■□□□ 1.81
CFAP54Q96N23 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP54Q96N23 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.34■■□□□ 1.81
CFAP54Q96N23 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP54Q96N23 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CFAP54Q96N23 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CFAP54Q96N23 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP54Q96N23 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CFAP54Q96N23 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CFAP54Q96N23 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFAP54Q96N23 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.3■■□□□ 1.8
CFAP54Q96N23 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP54Q96N23 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.29■■□□□ 1.8
CFAP54Q96N23 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP54Q96N23 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CFAP54Q96N23 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFAP54Q96N23 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CFAP54Q96N23 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.28■■□□□ 1.8
CFAP54Q96N23 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.28■■□□□ 1.8
CFAP54Q96N23 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CFAP54Q96N23 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.28■■□□□ 1.8
CFAP54Q96N23 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.27■■□□□ 1.8
CFAP54Q96N23 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.27■■□□□ 1.8
CFAP54Q96N23 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CFAP54Q96N23 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP54Q96N23 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP54Q96N23 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CFAP54Q96N23 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP54Q96N23 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP54Q96N23 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP54Q96N23 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP54Q96N23 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP54Q96N23 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CFAP54Q96N23 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.24■■□□□ 1.79
CFAP54Q96N23 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CFAP54Q96N23 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CFAP54Q96N23 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CFAP54Q96N23 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
CFAP54Q96N23 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.22■■□□□ 1.79
CFAP54Q96N23 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CFAP54Q96N23 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.21■■□□□ 1.79
CFAP54Q96N23 AL451085.2-201ENST00000605085 799 ntBASIC26.21■■□□□ 1.79
CFAP54Q96N23 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.21■■□□□ 1.79
CFAP54Q96N23 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFAP54Q96N23 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.2■■□□□ 1.79
CFAP54Q96N23 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.2■■□□□ 1.79
CFAP54Q96N23 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFAP54Q96N23 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP54Q96N23 U85056.1-201ENST00000616429 682 ntBASIC26.18■■□□□ 1.78
CFAP54Q96N23 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.18■■□□□ 1.78
CFAP54Q96N23 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFAP54Q96N23 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CFAP54Q96N23 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP54Q96N23 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFAP54Q96N23 KRT18P60-201ENST00000312876 1297 ntBASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms