Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHCHD1Q96BP2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHCHD1Q96BP2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHCHD1Q96BP2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CHCHD1Q96BP2 DRD5P2-201ENST00000421395 2012 ntBASIC19.27■□□□□ 0.67
CHCHD1Q96BP2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHCHD1Q96BP2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHCHD1Q96BP2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHCHD1Q96BP2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHCHD1Q96BP2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHCHD1Q96BP2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHCHD1Q96BP2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHCHD1Q96BP2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHCHD1Q96BP2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHCHD1Q96BP2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHCHD1Q96BP2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHCHD1Q96BP2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHCHD1Q96BP2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.23■□□□□ 0.67
CHCHD1Q96BP2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.23■□□□□ 0.67
CHCHD1Q96BP2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.23■□□□□ 0.67
CHCHD1Q96BP2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHCHD1Q96BP2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHCHD1Q96BP2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CHCHD1Q96BP2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHCHD1Q96BP2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHCHD1Q96BP2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.21■□□□□ 0.67
CHCHD1Q96BP2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHCHD1Q96BP2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHCHD1Q96BP2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.21■□□□□ 0.67
CHCHD1Q96BP2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHCHD1Q96BP2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHCHD1Q96BP2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHCHD1Q96BP2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHCHD1Q96BP2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHCHD1Q96BP2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHCHD1Q96BP2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHCHD1Q96BP2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHCHD1Q96BP2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHCHD1Q96BP2 AL135925.1-201ENST00000605920 1701 ntBASIC19.16■□□□□ 0.66
CHCHD1Q96BP2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHCHD1Q96BP2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHCHD1Q96BP2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.16■□□□□ 0.66
CHCHD1Q96BP2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHCHD1Q96BP2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHCHD1Q96BP2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CHCHD1Q96BP2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CHCHD1Q96BP2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.13■□□□□ 0.65
CHCHD1Q96BP2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHCHD1Q96BP2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHCHD1Q96BP2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHCHD1Q96BP2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.12■□□□□ 0.65
CHCHD1Q96BP2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHCHD1Q96BP2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHCHD1Q96BP2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHCHD1Q96BP2 AL139393.2-201ENST00000608721 2025 ntBASIC19.12■□□□□ 0.65
CHCHD1Q96BP2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHCHD1Q96BP2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHCHD1Q96BP2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHCHD1Q96BP2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHCHD1Q96BP2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHCHD1Q96BP2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CHCHD1Q96BP2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.1■□□□□ 0.65
CHCHD1Q96BP2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.1■□□□□ 0.65
CHCHD1Q96BP2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHCHD1Q96BP2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHCHD1Q96BP2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHCHD1Q96BP2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHCHD1Q96BP2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CHCHD1Q96BP2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CHCHD1Q96BP2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CHCHD1Q96BP2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CHCHD1Q96BP2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHCHD1Q96BP2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHCHD1Q96BP2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.08■□□□□ 0.64
CHCHD1Q96BP2 AL449106.1-201ENST00000608517 1980 ntBASIC19.08■□□□□ 0.64
CHCHD1Q96BP2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHCHD1Q96BP2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHCHD1Q96BP2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHCHD1Q96BP2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHCHD1Q96BP2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHCHD1Q96BP2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHCHD1Q96BP2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHCHD1Q96BP2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHCHD1Q96BP2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHCHD1Q96BP2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHCHD1Q96BP2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.03■□□□□ 0.64
CHCHD1Q96BP2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHCHD1Q96BP2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHCHD1Q96BP2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.01■□□□□ 0.63
CHCHD1Q96BP2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHCHD1Q96BP2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHCHD1Q96BP2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHCHD1Q96BP2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHCHD1Q96BP2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19■□□□□ 0.63
CHCHD1Q96BP2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19■□□□□ 0.63
CHCHD1Q96BP2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHCHD1Q96BP2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19■□□□□ 0.63
CHCHD1Q96BP2 BX255925.1-201ENST00000566954 1854 ntBASIC18.99■□□□□ 0.63
CHCHD1Q96BP2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHCHD1Q96BP2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms