Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.88■■■□□ 2.21
GBF1Q92538 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
GBF1Q92538 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
GBF1Q92538 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
GBF1Q92538 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
GBF1Q92538 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
GBF1Q92538 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
GBF1Q92538 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.2
GBF1Q92538 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
GBF1Q92538 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
GBF1Q92538 GPX1-201ENST00000419349 1106 ntBASIC28.81■■■□□ 2.2
GBF1Q92538 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
GBF1Q92538 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.8■■■□□ 2.2
GBF1Q92538 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.8■■■□□ 2.2
GBF1Q92538 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
GBF1Q92538 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.79■■■□□ 2.2
GBF1Q92538 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
GBF1Q92538 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
GBF1Q92538 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.77■■■□□ 2.2
GBF1Q92538 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
GBF1Q92538 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
GBF1Q92538 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
GBF1Q92538 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
GBF1Q92538 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.76■■■□□ 2.2
GBF1Q92538 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
GBF1Q92538 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
GBF1Q92538 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.76■■■□□ 2.19
GBF1Q92538 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.76■■■□□ 2.19
GBF1Q92538 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.76■■■□□ 2.19
GBF1Q92538 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
GBF1Q92538 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.74■■■□□ 2.19
GBF1Q92538 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
GBF1Q92538 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.71■■■□□ 2.19
GBF1Q92538 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
GBF1Q92538 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
GBF1Q92538 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.69■■■□□ 2.18
GBF1Q92538 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
GBF1Q92538 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
GBF1Q92538 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
GBF1Q92538 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.67■■■□□ 2.18
GBF1Q92538 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.66■■■□□ 2.18
GBF1Q92538 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.66■■■□□ 2.18
GBF1Q92538 AC012354.3-201ENST00000623734 483 ntBASIC28.66■■■□□ 2.18
GBF1Q92538 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
GBF1Q92538 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
GBF1Q92538 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.65■■■□□ 2.18
GBF1Q92538 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
GBF1Q92538 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
GBF1Q92538 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
GBF1Q92538 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.63■■■□□ 2.17
GBF1Q92538 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.63■■■□□ 2.17
GBF1Q92538 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
GBF1Q92538 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
GBF1Q92538 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
GBF1Q92538 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
GBF1Q92538 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
GBF1Q92538 NTF6A-201ENST00000591175 560 ntBASIC28.6■■■□□ 2.17
GBF1Q92538 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.6■■■□□ 2.17
GBF1Q92538 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
GBF1Q92538 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.6■■■□□ 2.17
GBF1Q92538 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
GBF1Q92538 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
GBF1Q92538 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
GBF1Q92538 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
GBF1Q92538 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.58■■■□□ 2.17
GBF1Q92538 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
GBF1Q92538 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
GBF1Q92538 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
GBF1Q92538 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
GBF1Q92538 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
GBF1Q92538 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
GBF1Q92538 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.53■■■□□ 2.16
GBF1Q92538 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.53■■■□□ 2.16
GBF1Q92538 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
GBF1Q92538 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
GBF1Q92538 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
GBF1Q92538 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
GBF1Q92538 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
GBF1Q92538 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
GBF1Q92538 RNF126P1-201ENST00000567452 1320 ntBASIC28.5■■■□□ 2.15
GBF1Q92538 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.49■■■□□ 2.15
GBF1Q92538 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
GBF1Q92538 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.48■■■□□ 2.15
GBF1Q92538 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
GBF1Q92538 LINC00273-201ENST00000539813 1452 ntBASIC28.47■■■□□ 2.15
GBF1Q92538 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.47■■■□□ 2.15
GBF1Q92538 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
GBF1Q92538 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.47■■■□□ 2.15
GBF1Q92538 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
GBF1Q92538 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
GBF1Q92538 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms