Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
CT55Q8WUE5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CT55Q8WUE5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CT55Q8WUE5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.88■■□□□ 1.57
CT55Q8WUE5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CT55Q8WUE5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
CT55Q8WUE5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.87■■□□□ 1.57
CT55Q8WUE5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CT55Q8WUE5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CT55Q8WUE5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CT55Q8WUE5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CT55Q8WUE5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CT55Q8WUE5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.85■■□□□ 1.57
CT55Q8WUE5 AL161658.1-201ENST00000623641 1967 ntBASIC24.84■■□□□ 1.57
CT55Q8WUE5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CT55Q8WUE5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.83■■□□□ 1.57
CT55Q8WUE5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CT55Q8WUE5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CT55Q8WUE5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CT55Q8WUE5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CT55Q8WUE5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.81■■□□□ 1.56
CT55Q8WUE5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CT55Q8WUE5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CT55Q8WUE5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.79■■□□□ 1.56
CT55Q8WUE5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CT55Q8WUE5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CT55Q8WUE5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.78■■□□□ 1.56
CT55Q8WUE5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CT55Q8WUE5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CT55Q8WUE5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CT55Q8WUE5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CT55Q8WUE5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.78■■□□□ 1.56
CT55Q8WUE5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.78■■□□□ 1.56
CT55Q8WUE5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CT55Q8WUE5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CT55Q8WUE5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CT55Q8WUE5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CT55Q8WUE5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.77■■□□□ 1.56
CT55Q8WUE5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CT55Q8WUE5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.76■■□□□ 1.55
CT55Q8WUE5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CT55Q8WUE5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CT55Q8WUE5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CT55Q8WUE5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CT55Q8WUE5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CT55Q8WUE5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L13-201ENST00000554103 1267 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L15-201ENST00000611059 1267 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L23-201ENST00000615195 1269 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L24-201ENST00000617576 1269 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L22-201ENST00000618238 1269 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L20-201ENST00000619712 1269 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L21-201ENST00000622058 1269 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L10-201ENST00000622460 1267 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 DUX4L25-201ENST00000624915 1269 ntBASIC24.73■■□□□ 1.55
CT55Q8WUE5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.72■■□□□ 1.55
CT55Q8WUE5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CT55Q8WUE5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CT55Q8WUE5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CT55Q8WUE5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.7■■□□□ 1.54
CT55Q8WUE5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.7■■□□□ 1.54
CT55Q8WUE5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CT55Q8WUE5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.69■■□□□ 1.54
CT55Q8WUE5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.68■■□□□ 1.54
CT55Q8WUE5 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.68■■□□□ 1.54
CT55Q8WUE5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.67■■□□□ 1.54
CT55Q8WUE5 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.66■■□□□ 1.54
CT55Q8WUE5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.66■■□□□ 1.54
CT55Q8WUE5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CT55Q8WUE5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CT55Q8WUE5 AC010864.1-201ENST00000609407 1511 ntBASIC24.65■■□□□ 1.54
CT55Q8WUE5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CT55Q8WUE5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CT55Q8WUE5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CT55Q8WUE5 HSD17B1P1-201ENST00000590052 955 ntBASIC24.64■■□□□ 1.54
CT55Q8WUE5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CT55Q8WUE5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CT55Q8WUE5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CT55Q8WUE5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
CT55Q8WUE5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CT55Q8WUE5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CT55Q8WUE5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
CT55Q8WUE5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.62■■□□□ 1.53
CT55Q8WUE5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.61■■□□□ 1.53
CT55Q8WUE5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CT55Q8WUE5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CT55Q8WUE5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.6■■□□□ 1.53
CT55Q8WUE5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CT55Q8WUE5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CT55Q8WUE5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CT55Q8WUE5 LINC00273-201ENST00000539813 1452 ntBASIC24.58■■□□□ 1.52
CT55Q8WUE5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CT55Q8WUE5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.57■■□□□ 1.52
CT55Q8WUE5 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.57■■□□□ 1.52
CT55Q8WUE5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CT55Q8WUE5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CT55Q8WUE5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CT55Q8WUE5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.56■■□□□ 1.52
CT55Q8WUE5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.56■■□□□ 1.52
CT55Q8WUE5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms