Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00308Q8TCZ7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00308Q8TCZ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LINC00308Q8TCZ7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00308Q8TCZ7 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC00308Q8TCZ7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00308Q8TCZ7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00308Q8TCZ7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LINC00308Q8TCZ7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LINC00308Q8TCZ7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00308Q8TCZ7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00308Q8TCZ7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LINC00308Q8TCZ7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00308Q8TCZ7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LINC00308Q8TCZ7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00308Q8TCZ7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00308Q8TCZ7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00308Q8TCZ7 AL139393.2-201ENST00000608721 2025 ntBASIC17.48■□□□□ 0.39
LINC00308Q8TCZ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LINC00308Q8TCZ7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LINC00308Q8TCZ7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.48■□□□□ 0.39
LINC00308Q8TCZ7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00308Q8TCZ7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00308Q8TCZ7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00308Q8TCZ7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00308Q8TCZ7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00308Q8TCZ7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00308Q8TCZ7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00308Q8TCZ7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00308Q8TCZ7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC00308Q8TCZ7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC00308Q8TCZ7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC00308Q8TCZ7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LINC00308Q8TCZ7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00308Q8TCZ7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LINC00308Q8TCZ7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.43■□□□□ 0.38
LINC00308Q8TCZ7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00308Q8TCZ7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00308Q8TCZ7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00308Q8TCZ7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LINC00308Q8TCZ7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC00308Q8TCZ7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00308Q8TCZ7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00308Q8TCZ7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LINC00308Q8TCZ7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00308Q8TCZ7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00308Q8TCZ7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00308Q8TCZ7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00308Q8TCZ7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LINC00308Q8TCZ7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00308Q8TCZ7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00308Q8TCZ7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00308Q8TCZ7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LINC00308Q8TCZ7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00308Q8TCZ7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LINC00308Q8TCZ7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00308Q8TCZ7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00308Q8TCZ7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00308Q8TCZ7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00308Q8TCZ7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LINC00308Q8TCZ7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00308Q8TCZ7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LINC00308Q8TCZ7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00308Q8TCZ7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00308Q8TCZ7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00308Q8TCZ7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00308Q8TCZ7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00308Q8TCZ7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00308Q8TCZ7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00308Q8TCZ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC00308Q8TCZ7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00308Q8TCZ7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.34■□□□□ 0.37
LINC00308Q8TCZ7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LINC00308Q8TCZ7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00308Q8TCZ7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00308Q8TCZ7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00308Q8TCZ7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LINC00308Q8TCZ7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00308Q8TCZ7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
LINC00308Q8TCZ7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
LINC00308Q8TCZ7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00308Q8TCZ7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC17.33■□□□□ 0.36
LINC00308Q8TCZ7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LINC00308Q8TCZ7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00308Q8TCZ7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00308Q8TCZ7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00308Q8TCZ7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00308Q8TCZ7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC00308Q8TCZ7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LINC00308Q8TCZ7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LINC00308Q8TCZ7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00308Q8TCZ7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC00308Q8TCZ7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00308Q8TCZ7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00308Q8TCZ7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LINC00308Q8TCZ7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00308Q8TCZ7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00308Q8TCZ7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00308Q8TCZ7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00308Q8TCZ7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms