Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01006Q8NI28 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.82■□□□□ 0.92
LINC01006Q8NI28 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC01006Q8NI28 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC01006Q8NI28 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01006Q8NI28 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01006Q8NI28 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LINC01006Q8NI28 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.79■□□□□ 0.92
LINC01006Q8NI28 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC01006Q8NI28 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC01006Q8NI28 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC01006Q8NI28 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LINC01006Q8NI28 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC01006Q8NI28 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01006Q8NI28 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01006Q8NI28 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01006Q8NI28 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LINC01006Q8NI28 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01006Q8NI28 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01006Q8NI28 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L13-201ENST00000554103 1267 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 HSD17B1P1-201ENST00000590052 955 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L15-201ENST00000611059 1267 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L23-201ENST00000615195 1269 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L24-201ENST00000617576 1269 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L22-201ENST00000618238 1269 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L20-201ENST00000619712 1269 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L21-201ENST00000622058 1269 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L10-201ENST00000622460 1267 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 DUX4L25-201ENST00000624915 1269 ntBASIC20.77■□□□□ 0.92
LINC01006Q8NI28 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01006Q8NI28 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01006Q8NI28 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01006Q8NI28 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01006Q8NI28 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LINC01006Q8NI28 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01006Q8NI28 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC01006Q8NI28 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01006Q8NI28 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.72■□□□□ 0.91
LINC01006Q8NI28 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01006Q8NI28 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC01006Q8NI28 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC01006Q8NI28 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC01006Q8NI28 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01006Q8NI28 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01006Q8NI28 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.7■□□□□ 0.9
LINC01006Q8NI28 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.7■□□□□ 0.9
LINC01006Q8NI28 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01006Q8NI28 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01006Q8NI28 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC01006Q8NI28 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC01006Q8NI28 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01006Q8NI28 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01006Q8NI28 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC01006Q8NI28 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC01006Q8NI28 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01006Q8NI28 AL161658.1-201ENST00000623641 1967 ntBASIC20.67■□□□□ 0.9
LINC01006Q8NI28 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01006Q8NI28 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC01006Q8NI28 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC01006Q8NI28 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC01006Q8NI28 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01006Q8NI28 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01006Q8NI28 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LINC01006Q8NI28 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC01006Q8NI28 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LINC01006Q8NI28 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LINC01006Q8NI28 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LINC01006Q8NI28 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC01006Q8NI28 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01006Q8NI28 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC01006Q8NI28 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC01006Q8NI28 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC01006Q8NI28 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LINC01006Q8NI28 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC01006Q8NI28 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
LINC01006Q8NI28 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC01006Q8NI28 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.61■□□□□ 0.89
LINC01006Q8NI28 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC01006Q8NI28 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LINC01006Q8NI28 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01006Q8NI28 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01006Q8NI28 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC01006Q8NI28 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.59■□□□□ 0.89
LINC01006Q8NI28 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.59■□□□□ 0.89
LINC01006Q8NI28 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.58■□□□□ 0.89
LINC01006Q8NI28 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC01006Q8NI28 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01006Q8NI28 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC01006Q8NI28 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.58■□□□□ 0.88
LINC01006Q8NI28 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINC01006Q8NI28 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC01006Q8NI28 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.57■□□□□ 0.88
LINC01006Q8NI28 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC01006Q8NI28 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01006Q8NI28 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.56■□□□□ 0.88
LINC01006Q8NI28 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.56■□□□□ 0.88
LINC01006Q8NI28 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.56■□□□□ 0.88
LINC01006Q8NI28 LINC00273-201ENST00000539813 1452 ntBASIC20.56■□□□□ 0.88
LINC01006Q8NI28 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms