Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.52■■■□□ 2
TTC16Q8NEE8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TTC16Q8NEE8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
TTC16Q8NEE8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.51■■□□□ 1.99
TTC16Q8NEE8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.51■■□□□ 1.99
TTC16Q8NEE8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
TTC16Q8NEE8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TTC16Q8NEE8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
TTC16Q8NEE8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
TTC16Q8NEE8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
TTC16Q8NEE8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TTC16Q8NEE8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
TTC16Q8NEE8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
TTC16Q8NEE8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TTC16Q8NEE8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
TTC16Q8NEE8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.47■■□□□ 1.99
TTC16Q8NEE8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TTC16Q8NEE8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
TTC16Q8NEE8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
TTC16Q8NEE8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.46■■□□□ 1.99
TTC16Q8NEE8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.46■■□□□ 1.99
TTC16Q8NEE8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
TTC16Q8NEE8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
TTC16Q8NEE8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.44■■□□□ 1.98
TTC16Q8NEE8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TTC16Q8NEE8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TTC16Q8NEE8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC16Q8NEE8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
TTC16Q8NEE8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.4■■□□□ 1.98
TTC16Q8NEE8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TTC16Q8NEE8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TTC16Q8NEE8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TTC16Q8NEE8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TTC16Q8NEE8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TTC16Q8NEE8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.38■■□□□ 1.97
TTC16Q8NEE8 AC016575.1-201ENST00000607026 382 ntBASIC27.38■■□□□ 1.97
TTC16Q8NEE8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TTC16Q8NEE8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TTC16Q8NEE8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC16Q8NEE8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.36■■□□□ 1.97
TTC16Q8NEE8 DUX4L11-201ENST00000611504 1267 ntBASIC27.36■■□□□ 1.97
TTC16Q8NEE8 DUX4L12-201ENST00000614593 1267 ntBASIC27.36■■□□□ 1.97
TTC16Q8NEE8 DUX4L14-201ENST00000621227 1267 ntBASIC27.36■■□□□ 1.97
TTC16Q8NEE8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC16Q8NEE8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC16Q8NEE8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.35■■□□□ 1.97
TTC16Q8NEE8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TTC16Q8NEE8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TTC16Q8NEE8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TTC16Q8NEE8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.33■■□□□ 1.97
TTC16Q8NEE8 LINC01971-201ENST00000617888 1048 ntBASIC27.33■■□□□ 1.97
TTC16Q8NEE8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.33■■□□□ 1.96
TTC16Q8NEE8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TTC16Q8NEE8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
TTC16Q8NEE8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TTC16Q8NEE8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
TTC16Q8NEE8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
TTC16Q8NEE8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.31■■□□□ 1.96
TTC16Q8NEE8 MIR3648-2-201ENST00000581792 180 ntBASIC27.31■■□□□ 1.96
TTC16Q8NEE8 MIR3648-1-201ENST00000615959 180 ntBASIC27.31■■□□□ 1.96
TTC16Q8NEE8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.31■■□□□ 1.96
TTC16Q8NEE8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.31■■□□□ 1.96
TTC16Q8NEE8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TTC16Q8NEE8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TTC16Q8NEE8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC16Q8NEE8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC16Q8NEE8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.28■■□□□ 1.96
TTC16Q8NEE8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.28■■□□□ 1.96
TTC16Q8NEE8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
TTC16Q8NEE8 CR559946.2-201ENST00000623684 991 ntBASIC27.27■■□□□ 1.96
TTC16Q8NEE8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC16Q8NEE8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC16Q8NEE8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TTC16Q8NEE8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
TTC16Q8NEE8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TTC16Q8NEE8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.26■■□□□ 1.95
TTC16Q8NEE8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
TTC16Q8NEE8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC16Q8NEE8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC16Q8NEE8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
TTC16Q8NEE8 MIR639-201ENST00000384974 98 ntBASIC27.24■■□□□ 1.95
TTC16Q8NEE8 AC010864.1-201ENST00000609407 1511 ntBASIC27.24■■□□□ 1.95
TTC16Q8NEE8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.24■■□□□ 1.95
TTC16Q8NEE8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
TTC16Q8NEE8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.22■■□□□ 1.95
TTC16Q8NEE8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TTC16Q8NEE8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TTC16Q8NEE8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.2■■□□□ 1.95
TTC16Q8NEE8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
TTC16Q8NEE8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TTC16Q8NEE8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TTC16Q8NEE8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.19■■□□□ 1.94
TTC16Q8NEE8 MIR4449-201ENST00000578365 66 ntBASIC27.19■■□□□ 1.94
TTC16Q8NEE8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TTC16Q8NEE8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
TTC16Q8NEE8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC16Q8NEE8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TTC16Q8NEE8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
TTC16Q8NEE8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC16Q8NEE8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms