Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
EXD3Q8N9H8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.88■■□□□ 1.57
EXD3Q8N9H8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
EXD3Q8N9H8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
EXD3Q8N9H8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
EXD3Q8N9H8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.87■■□□□ 1.57
EXD3Q8N9H8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
EXD3Q8N9H8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
EXD3Q8N9H8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
EXD3Q8N9H8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
EXD3Q8N9H8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
EXD3Q8N9H8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
EXD3Q8N9H8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
EXD3Q8N9H8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
EXD3Q8N9H8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
EXD3Q8N9H8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
EXD3Q8N9H8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
EXD3Q8N9H8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
EXD3Q8N9H8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.8■■□□□ 1.56
EXD3Q8N9H8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
EXD3Q8N9H8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.8■■□□□ 1.56
EXD3Q8N9H8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.79■■□□□ 1.56
EXD3Q8N9H8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
EXD3Q8N9H8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
EXD3Q8N9H8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.78■■□□□ 1.56
EXD3Q8N9H8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.78■■□□□ 1.56
EXD3Q8N9H8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.78■■□□□ 1.56
EXD3Q8N9H8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.78■■□□□ 1.56
EXD3Q8N9H8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
EXD3Q8N9H8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
EXD3Q8N9H8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.77■■□□□ 1.56
EXD3Q8N9H8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
EXD3Q8N9H8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
EXD3Q8N9H8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
EXD3Q8N9H8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
EXD3Q8N9H8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
EXD3Q8N9H8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
EXD3Q8N9H8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.73■■□□□ 1.55
EXD3Q8N9H8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
EXD3Q8N9H8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.72■■□□□ 1.55
EXD3Q8N9H8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
EXD3Q8N9H8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
EXD3Q8N9H8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
EXD3Q8N9H8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
EXD3Q8N9H8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
EXD3Q8N9H8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
EXD3Q8N9H8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.71■■□□□ 1.55
EXD3Q8N9H8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
EXD3Q8N9H8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
EXD3Q8N9H8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
EXD3Q8N9H8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.7■■□□□ 1.54
EXD3Q8N9H8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
EXD3Q8N9H8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
EXD3Q8N9H8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
EXD3Q8N9H8 RARRES2P2-201ENST00000394842 485 ntBASIC24.69■■□□□ 1.54
EXD3Q8N9H8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
EXD3Q8N9H8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
EXD3Q8N9H8 DUX4L13-201ENST00000554103 1267 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L15-201ENST00000611059 1267 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L23-201ENST00000615195 1269 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L24-201ENST00000617576 1269 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L22-201ENST00000618238 1269 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L20-201ENST00000619712 1269 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L21-201ENST00000622058 1269 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L10-201ENST00000622460 1267 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 DUX4L25-201ENST00000624915 1269 ntBASIC24.68■■□□□ 1.54
EXD3Q8N9H8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
EXD3Q8N9H8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
EXD3Q8N9H8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
EXD3Q8N9H8 AC120057.4-201ENST00000624722 1615 ntBASIC24.66■■□□□ 1.54
EXD3Q8N9H8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
EXD3Q8N9H8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
EXD3Q8N9H8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
EXD3Q8N9H8 ABHD17AP5-201ENST00000580133 923 ntBASIC24.65■■□□□ 1.54
EXD3Q8N9H8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
EXD3Q8N9H8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
EXD3Q8N9H8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
EXD3Q8N9H8 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.64■■□□□ 1.54
EXD3Q8N9H8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.64■■□□□ 1.54
EXD3Q8N9H8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.63■■□□□ 1.53
EXD3Q8N9H8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.63■■□□□ 1.53
EXD3Q8N9H8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.63■■□□□ 1.53
EXD3Q8N9H8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
EXD3Q8N9H8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
EXD3Q8N9H8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.62■■□□□ 1.53
EXD3Q8N9H8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.62■■□□□ 1.53
EXD3Q8N9H8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.62■■□□□ 1.53
EXD3Q8N9H8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.62■■□□□ 1.53
EXD3Q8N9H8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.62■■□□□ 1.53
EXD3Q8N9H8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EXD3Q8N9H8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EXD3Q8N9H8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.61■■□□□ 1.53
EXD3Q8N9H8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
EXD3Q8N9H8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.59■■□□□ 1.53
EXD3Q8N9H8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
EXD3Q8N9H8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
EXD3Q8N9H8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms