Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC41.4■■■■■ 4.22
ABCA9Q8IUA7 HES6-205ENST00000409356 528 ntTSL 2 BASIC41.4■■■■■ 4.22
ABCA9Q8IUA7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC41.39■■■■■ 4.22
ABCA9Q8IUA7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC41.39■■■■■ 4.22
ABCA9Q8IUA7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC41.39■■■■■ 4.22
ABCA9Q8IUA7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC41.39■■■■■ 4.22
ABCA9Q8IUA7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC41.38■■■■■ 4.21
ABCA9Q8IUA7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
ABCA9Q8IUA7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
ABCA9Q8IUA7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC41.35■■■■■ 4.21
ABCA9Q8IUA7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC41.34■■■■■ 4.21
ABCA9Q8IUA7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC41.33■■■■■ 4.21
ABCA9Q8IUA7 CHML-204ENST00000638121 920 ntTSL 2 BASIC41.33■■■■■ 4.21
ABCA9Q8IUA7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC41.3■■■■■ 4.2
ABCA9Q8IUA7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC41.29■■■■■ 4.2
ABCA9Q8IUA7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC41.27■■■■■ 4.2
ABCA9Q8IUA7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.2
ABCA9Q8IUA7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.19
ABCA9Q8IUA7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC41.26■■■■■ 4.19
ABCA9Q8IUA7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC41.25■■■■■ 4.19
ABCA9Q8IUA7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
ABCA9Q8IUA7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC41.23■■■■■ 4.19
ABCA9Q8IUA7 GPX1-201ENST00000419349 1106 ntBASIC41.21■■■■■ 4.19
ABCA9Q8IUA7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
ABCA9Q8IUA7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC41.2■■■■■ 4.19
ABCA9Q8IUA7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
ABCA9Q8IUA7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC41.2■■■■■ 4.19
ABCA9Q8IUA7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.18
ABCA9Q8IUA7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
ABCA9Q8IUA7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC41.18■■■■■ 4.18
ABCA9Q8IUA7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
ABCA9Q8IUA7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
ABCA9Q8IUA7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC41.16■■■■■ 4.18
ABCA9Q8IUA7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
ABCA9Q8IUA7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC41.14■■■■■ 4.18
ABCA9Q8IUA7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC41.13■■■■■ 4.18
ABCA9Q8IUA7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC41.12■■■■■ 4.17
ABCA9Q8IUA7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC41.12■■■■■ 4.17
ABCA9Q8IUA7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC41.11■■■■■ 4.17
ABCA9Q8IUA7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC41.11■■■■■ 4.17
ABCA9Q8IUA7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC41.09■■■■■ 4.17
ABCA9Q8IUA7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC41.07■■■■■ 4.17
ABCA9Q8IUA7 RNF126P1-201ENST00000567452 1320 ntBASIC41.07■■■■■ 4.17
ABCA9Q8IUA7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC41.07■■■■■ 4.16
ABCA9Q8IUA7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC41.07■■■■■ 4.16
ABCA9Q8IUA7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC41.07■■■■■ 4.16
ABCA9Q8IUA7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
ABCA9Q8IUA7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC41.04■■■■■ 4.16
ABCA9Q8IUA7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC41.03■■■■■ 4.16
ABCA9Q8IUA7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC41.02■■■■■ 4.16
ABCA9Q8IUA7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC41■■■■■ 4.15
ABCA9Q8IUA7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC41■■■■■ 4.15
ABCA9Q8IUA7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC41■■■■■ 4.15
ABCA9Q8IUA7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC40.99■■■■■ 4.15
ABCA9Q8IUA7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC40.96■■■■■ 4.15
ABCA9Q8IUA7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC40.96■■■■■ 4.15
ABCA9Q8IUA7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC40.96■■■■■ 4.15
ABCA9Q8IUA7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC40.96■■■■■ 4.15
ABCA9Q8IUA7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC40.95■■■■■ 4.15
ABCA9Q8IUA7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC40.95■■■■■ 4.15
ABCA9Q8IUA7 NTF6A-201ENST00000591175 560 ntBASIC40.94■■■■■ 4.14
ABCA9Q8IUA7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC40.94■■■■■ 4.14
ABCA9Q8IUA7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC40.94■■■■■ 4.14
ABCA9Q8IUA7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC40.92■■■■■ 4.14
ABCA9Q8IUA7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC40.92■■■■■ 4.14
ABCA9Q8IUA7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC40.92■■■■■ 4.14
ABCA9Q8IUA7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC40.91■■■■■ 4.14
ABCA9Q8IUA7 AC012354.3-201ENST00000623734 483 ntBASIC40.91■■■■■ 4.14
ABCA9Q8IUA7 LINC00273-201ENST00000539813 1452 ntBASIC40.9■■■■■ 4.14
ABCA9Q8IUA7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC40.89■■■■■ 4.14
ABCA9Q8IUA7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC40.89■■■■■ 4.14
ABCA9Q8IUA7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC40.88■■■■■ 4.13
ABCA9Q8IUA7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC40.88■■■■■ 4.13
ABCA9Q8IUA7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
ABCA9Q8IUA7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC40.86■■■■■ 4.13
ABCA9Q8IUA7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC40.84■■■■■ 4.13
ABCA9Q8IUA7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC40.82■■■■■ 4.13
ABCA9Q8IUA7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC40.82■■■■■ 4.13
ABCA9Q8IUA7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC40.82■■■■■ 4.12
ABCA9Q8IUA7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC40.82■■■■■ 4.12
ABCA9Q8IUA7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC40.81■■■■■ 4.12
ABCA9Q8IUA7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
ABCA9Q8IUA7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
ABCA9Q8IUA7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
ABCA9Q8IUA7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC40.79■■■■■ 4.12
ABCA9Q8IUA7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC40.79■■■■■ 4.12
ABCA9Q8IUA7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
ABCA9Q8IUA7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC40.77■■■■■ 4.12
ABCA9Q8IUA7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC40.77■■■■■ 4.12
ABCA9Q8IUA7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC40.75■■■■■ 4.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms