Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ZNF546Q86UE3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.82■■□□□ 1.08
ZNF546Q86UE3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF546Q86UE3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF546Q86UE3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ZNF546Q86UE3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF546Q86UE3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF546Q86UE3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF546Q86UE3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF546Q86UE3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF546Q86UE3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ZNF546Q86UE3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF546Q86UE3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF546Q86UE3 DRD5P2-201ENST00000421395 2012 ntBASIC21.79■■□□□ 1.08
ZNF546Q86UE3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF546Q86UE3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ZNF546Q86UE3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
ZNF546Q86UE3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF546Q86UE3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF546Q86UE3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF546Q86UE3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF546Q86UE3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZNF546Q86UE3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF546Q86UE3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF546Q86UE3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF546Q86UE3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ZNF546Q86UE3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ZNF546Q86UE3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF546Q86UE3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.75■■□□□ 1.07
ZNF546Q86UE3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.75■■□□□ 1.07
ZNF546Q86UE3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF546Q86UE3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ZNF546Q86UE3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF546Q86UE3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF546Q86UE3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.73■■□□□ 1.07
ZNF546Q86UE3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF546Q86UE3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.72■■□□□ 1.07
ZNF546Q86UE3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF546Q86UE3 AL135925.1-201ENST00000605920 1701 ntBASIC21.72■■□□□ 1.07
ZNF546Q86UE3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF546Q86UE3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ZNF546Q86UE3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF546Q86UE3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ZNF546Q86UE3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.7■■□□□ 1.06
ZNF546Q86UE3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF546Q86UE3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF546Q86UE3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF546Q86UE3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ZNF546Q86UE3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF546Q86UE3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF546Q86UE3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF546Q86UE3 AL139393.2-201ENST00000608721 2025 ntBASIC21.66■■□□□ 1.06
ZNF546Q86UE3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF546Q86UE3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF546Q86UE3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF546Q86UE3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.65■■□□□ 1.06
ZNF546Q86UE3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF546Q86UE3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF546Q86UE3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF546Q86UE3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF546Q86UE3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF546Q86UE3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.62■■□□□ 1.05
ZNF546Q86UE3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF546Q86UE3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.62■■□□□ 1.05
ZNF546Q86UE3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF546Q86UE3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF546Q86UE3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
ZNF546Q86UE3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF546Q86UE3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF546Q86UE3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF546Q86UE3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ZNF546Q86UE3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF546Q86UE3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.59■■□□□ 1.05
ZNF546Q86UE3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZNF546Q86UE3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
ZNF546Q86UE3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF546Q86UE3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF546Q86UE3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF546Q86UE3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF546Q86UE3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF546Q86UE3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ZNF546Q86UE3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF546Q86UE3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF546Q86UE3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF546Q86UE3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF546Q86UE3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF546Q86UE3 AL449106.1-201ENST00000608517 1980 ntBASIC21.54■■□□□ 1.04
ZNF546Q86UE3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF546Q86UE3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF546Q86UE3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF546Q86UE3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF546Q86UE3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF546Q86UE3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF546Q86UE3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ZNF546Q86UE3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF546Q86UE3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
ZNF546Q86UE3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF546Q86UE3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF546Q86UE3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ZNF546Q86UE3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms