Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.69■■□□□ 1.38
LRRK2Q5S007 AC019069.1-201ENST00000610008 1333 ntBASIC23.68■■□□□ 1.38
LRRK2Q5S007 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.67■■□□□ 1.38
LRRK2Q5S007 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRK2Q5S007 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
LRRK2Q5S007 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRRK2Q5S007 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRK2Q5S007 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.64■■□□□ 1.37
LRRK2Q5S007 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
LRRK2Q5S007 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.63■■□□□ 1.37
LRRK2Q5S007 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRK2Q5S007 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.61■■□□□ 1.37
LRRK2Q5S007 AL033527.3-201ENST00000566366 1196 ntBASIC23.61■■□□□ 1.37
LRRK2Q5S007 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRRK2Q5S007 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LRRK2Q5S007 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LRRK2Q5S007 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LRRK2Q5S007 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
LRRK2Q5S007 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.59■■□□□ 1.37
LRRK2Q5S007 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
LRRK2Q5S007 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
LRRK2Q5S007 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.58■■□□□ 1.36
LRRK2Q5S007 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRRK2Q5S007 AL592295.1-201ENST00000400984 884 ntBASIC23.57■■□□□ 1.36
LRRK2Q5S007 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.57■■□□□ 1.36
LRRK2Q5S007 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.56■■□□□ 1.36
LRRK2Q5S007 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRRK2Q5S007 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.55■■□□□ 1.36
LRRK2Q5S007 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.53■■□□□ 1.36
LRRK2Q5S007 RARRES2P1-201ENST00000474487 481 ntBASIC23.53■■□□□ 1.36
LRRK2Q5S007 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRRK2Q5S007 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
LRRK2Q5S007 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRRK2Q5S007 TSPY13P-201ENST00000338964 914 ntBASIC23.52■■□□□ 1.36
LRRK2Q5S007 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
LRRK2Q5S007 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.52■■□□□ 1.35
LRRK2Q5S007 AC008813.1-201ENST00000536597 885 ntBASIC23.52■■□□□ 1.35
LRRK2Q5S007 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.51■■□□□ 1.35
LRRK2Q5S007 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRRK2Q5S007 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.51■■□□□ 1.35
LRRK2Q5S007 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRRK2Q5S007 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
LRRK2Q5S007 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC23.49■■□□□ 1.35
LRRK2Q5S007 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.49■■□□□ 1.35
LRRK2Q5S007 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LRRK2Q5S007 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.49■■□□□ 1.35
LRRK2Q5S007 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.49■■□□□ 1.35
LRRK2Q5S007 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
LRRK2Q5S007 AL035685.1-201ENST00000636663 812 ntBASIC23.47■■□□□ 1.35
LRRK2Q5S007 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LRRK2Q5S007 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.47■■□□□ 1.35
LRRK2Q5S007 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LRRK2Q5S007 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
LRRK2Q5S007 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LRRK2Q5S007 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.46■■□□□ 1.35
LRRK2Q5S007 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
LRRK2Q5S007 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
LRRK2Q5S007 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
LRRK2Q5S007 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRK2Q5S007 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
LRRK2Q5S007 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.42■■□□□ 1.34
LRRK2Q5S007 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.41■■□□□ 1.34
LRRK2Q5S007 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
LRRK2Q5S007 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
LRRK2Q5S007 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.41■■□□□ 1.34
LRRK2Q5S007 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC23.4■■□□□ 1.34
LRRK2Q5S007 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LRRK2Q5S007 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
LRRK2Q5S007 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
LRRK2Q5S007 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
LRRK2Q5S007 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.39■■□□□ 1.34
LRRK2Q5S007 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRRK2Q5S007 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
LRRK2Q5S007 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
LRRK2Q5S007 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.38■■□□□ 1.33
LRRK2Q5S007 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
LRRK2Q5S007 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LRRK2Q5S007 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRRK2Q5S007 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.37■■□□□ 1.33
LRRK2Q5S007 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.37■■□□□ 1.33
LRRK2Q5S007 KRT18P60-201ENST00000312876 1297 ntBASIC23.37■■□□□ 1.33
LRRK2Q5S007 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.37■■□□□ 1.33
LRRK2Q5S007 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LRRK2Q5S007 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LRRK2Q5S007 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LRRK2Q5S007 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.35■■□□□ 1.33
LRRK2Q5S007 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
LRRK2Q5S007 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.35■■□□□ 1.33
LRRK2Q5S007 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LRRK2Q5S007 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.34■■□□□ 1.33
LRRK2Q5S007 AC022413.1-201ENST00000624602 984 ntBASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms